RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 GCGP01275 180 aa11.63□□□□□ -0.55
TSPAN4-213ENST00000524895 IGLV2-8P01709 118 aa11.63□□□□□ -0.55
TSPAN4-213ENST00000524895 PRR9Q5T870 116 aa11.63□□□□□ -0.55
TSPAN4-213ENST00000524895 PRR27Q6MZM9 219 aa11.63□□□□□ -0.55
TSPAN4-213ENST00000524895 LINC01551Q86U37 167 aa11.63□□□□□ -0.55
TSPAN4-213ENST00000524895 OCC1Q8TAD7 63 aa11.63□□□□□ -0.55
TSPAN4-213ENST00000524895 MLST8Q9BVC4 326 aa11.63□□□□□ -0.55
TSPAN4-213ENST00000524895 NOTCH1P46531 2555 aa11.63□□□□□ -0.55
TSPAN4-213ENST00000524895 CA1P00915 261 aaPredicted RBP11.62□□□□□ -0.55
TSPAN4-213ENST00000524895 INSP01308 110 aa11.62□□□□□ -0.55
TSPAN4-213ENST00000524895 RNASE4P34096 147 aaKnown RBP11.62□□□□□ -0.55
TSPAN4-213ENST00000524895 APOC4P55056 127 aa11.62□□□□□ -0.55
TSPAN4-213ENST00000524895 BTN1A1Q13410 526 aa11.62□□□□□ -0.55
TSPAN4-213ENST00000524895 ADIRFQ15847 76 aa11.62□□□□□ -0.55
TSPAN4-213ENST00000524895 GFI1BQ5VTD9 330 aa11.62□□□□□ -0.55
TSPAN4-213ENST00000524895 COX8CQ7Z4L0 72 aa11.62□□□□□ -0.55
TSPAN4-213ENST00000524895 C1QTNF4Q9BXJ3 329 aa11.62□□□□□ -0.55
TSPAN4-213ENST00000524895 CSTL1Q9H114 145 aa11.62□□□□□ -0.55
TSPAN4-213ENST00000524895 BIN3Q9NQY0 253 aa11.62□□□□□ -0.55
TSPAN4-213ENST00000524895 AGRNO00468 2067 aa11.62□□□□□ -0.55
TSPAN4-213ENST00000524895 DNAH3Q8TD57 4116 aa11.62□□□□□ -0.55
TSPAN4-213ENST00000524895 C7orf71A4D174 169 aa11.61□□□□□ -0.55
TSPAN4-213ENST00000524895 A8MZ25 164 aa11.61□□□□□ -0.55
TSPAN4-213ENST00000524895 RPL23P62829 140 aaKnown RBP11.61□□□□□ -0.55
TSPAN4-213ENST00000524895 KIR3DS1Q14943 382 aa11.61□□□□□ -0.55
TSPAN4-213ENST00000524895 SDF2L1Q9HCN8 221 aa11.61□□□□□ -0.55
TSPAN4-213ENST00000524895 XCL2Q9UBD3 114 aa11.61□□□□□ -0.55
TSPAN4-213ENST00000524895 TRAV12-3A0A0B4J271 114 aa11.6□□□□□ -0.55
TSPAN4-213ENST00000524895 KIR2DL5BA0A0G2JN68 375 aa11.6□□□□□ -0.55
TSPAN4-213ENST00000524895 KIR2DL5BA0A0G2JPC4 375 aa11.6□□□□□ -0.55
TSPAN4-213ENST00000524895 K7EIL1 84 aa11.6□□□□□ -0.55
TSPAN4-213ENST00000524895 K7EN84 100 aa11.6□□□□□ -0.55
TSPAN4-213ENST00000524895 ZNF80P51504 273 aaPredicted RBP11.6□□□□□ -0.55
TSPAN4-213ENST00000524895 PNRC1Q12796 327 aaPredicted RBP11.6□□□□□ -0.55
TSPAN4-213ENST00000524895 OR5I1Q13606 314 aa11.6□□□□□ -0.55
TSPAN4-213ENST00000524895 C10orf91Q5T1B1 145 aa11.6□□□□□ -0.55
TSPAN4-213ENST00000524895 FAM162BQ5T6X4 162 aa11.6□□□□□ -0.55
TSPAN4-213ENST00000524895 KIR2DL5AQ8N109 375 aa11.6□□□□□ -0.55
TSPAN4-213ENST00000524895 KIR2DL5BQ8NHK3 375 aa11.6□□□□□ -0.55
TSPAN4-213ENST00000524895 CARHSP1Q9Y2V2 147 aaKnown RBP11.6□□□□□ -0.55
TSPAN4-213ENST00000524895 TRAV21A0A0B4J279 112 aa11.59□□□□□ -0.55
TSPAN4-213ENST00000524895 CRXO43186 299 aaPredicted RBP11.59□□□□□ -0.55
TSPAN4-213ENST00000524895 SH2D1AO60880 128 aa11.59□□□□□ -0.55
TSPAN4-213ENST00000524895 PFN1P07737 140 aaKnown RBP11.59□□□□□ -0.55
TSPAN4-213ENST00000524895 FRMD6-AS1P0C7T7 363 aa11.59□□□□□ -0.55
TSPAN4-213ENST00000524895 Q6AWC8 147 aa11.59□□□□□ -0.55
TSPAN4-213ENST00000524895 FABP5P3A8MUU1 101 aa11.58□□□□□ -0.56
TSPAN4-213ENST00000524895 M0R036 132 aa11.58□□□□□ -0.56
TSPAN4-213ENST00000524895 APOC3P02656 99 aa11.58□□□□□ -0.56
TSPAN4-213ENST00000524895 GIG44P09565 113 aaPredicted RBP11.58□□□□□ -0.56
TSPAN4-213ENST00000524895 CRIP1P50238 77 aa11.58□□□□□ -0.56
TSPAN4-213ENST00000524895 LINC00322Q6ZN03 302 aaPredicted RBP11.58□□□□□ -0.56
TSPAN4-213ENST00000524895 ISOC2Q96AB3 205 aa11.58□□□□□ -0.56
TSPAN4-213ENST00000524895 DAZAP1Q96EP5 407 aaKnown RBP11.58□□□□□ -0.56
TSPAN4-213ENST00000524895 ERVFC1-1P60608 527 aa11.57□□□□□ -0.56
TSPAN4-213ENST00000524895 DEFB121Q5J5C9 76 aa11.57□□□□□ -0.56
TSPAN4-213ENST00000524895 C20orf144Q9BQM9 153 aa11.57□□□□□ -0.56
TSPAN4-213ENST00000524895 TMEM208Q9BTX3 173 aa11.57□□□□□ -0.56
TSPAN4-213ENST00000524895 NAGKQ9UJ70 344 aa11.57□□□□□ -0.56
TSPAN4-213ENST00000524895 UBE2CO00762 179 aa11.56□□□□□ -0.56
TSPAN4-213ENST00000524895 P01737 135 aa11.56□□□□□ -0.56
TSPAN4-213ENST00000524895 RBMY1A1P0DJD3 496 aaKnown RBP11.56□□□□□ -0.56
TSPAN4-213ENST00000524895 RBMY1CP0DJD4 496 aa11.56□□□□□ -0.56
TSPAN4-213ENST00000524895 RBMY1FQ15415 496 aaKnown RBP11.56□□□□□ -0.56
TSPAN4-213ENST00000524895 IBA57Q5T440 356 aaKnown RBP11.56□□□□□ -0.56
TSPAN4-213ENST00000524895 Q6ZQT7 251 aa11.56□□□□□ -0.56
TSPAN4-213ENST00000524895 SVBPQ8N300 66 aa11.56□□□□□ -0.56
TSPAN4-213ENST00000524895 RNASE7Q9H1E1 156 aaKnown RBP11.56□□□□□ -0.56
TSPAN4-213ENST00000524895 GOLT1BQ9Y3E0 138 aa11.56□□□□□ -0.56
TSPAN4-213ENST00000524895 C19orf71A6NCJ1 209 aa11.55□□□□□ -0.56
TSPAN4-213ENST00000524895 ATP6V1G1O75348 118 aa11.55□□□□□ -0.56
TSPAN4-213ENST00000524895 ZNF324O75467 553 aaPredicted RBP11.55□□□□□ -0.56
TSPAN4-213ENST00000524895 FAM231DQ6ZW35 169 aa11.55□□□□□ -0.56
TSPAN4-213ENST00000524895 TMEM256Q8N2U0 113 aa11.55□□□□□ -0.56
TSPAN4-213ENST00000524895 C15orf54Q8N8G6 183 aa11.55□□□□□ -0.56
TSPAN4-213ENST00000524895 SFRP2Q96HF1 295 aa11.55□□□□□ -0.56
TSPAN4-213ENST00000524895 IGHV3OR16-12A0A075B7B8 117 aa11.54□□□□□ -0.56
TSPAN4-213ENST00000524895 H7BYZ3 331 aa11.54□□□□□ -0.56
TSPAN4-213ENST00000524895 ORM1P02763 201 aa11.54□□□□□ -0.56
TSPAN4-213ENST00000524895 DEFB135Q30KP9 77 aa11.54□□□□□ -0.56
TSPAN4-213ENST00000524895 MUC21Q5SSG8 566 aa11.54□□□□□ -0.56
TSPAN4-213ENST00000524895 FAM159AQ6UWV7 190 aa11.54□□□□□ -0.56
TSPAN4-213ENST00000524895 CSNK1G2-AS1Q8NCQ2 148 aa11.54□□□□□ -0.56
TSPAN4-213ENST00000524895 NUDT10Q8NFP7 164 aa11.54□□□□□ -0.56
TSPAN4-213ENST00000524895 MRAPQ8TCY5 172 aa11.54□□□□□ -0.56
TSPAN4-213ENST00000524895 NUDT11Q96G61 164 aa11.54□□□□□ -0.56
TSPAN4-213ENST00000524895 LINC01587Q99440 93 aa11.54□□□□□ -0.56
TSPAN4-213ENST00000524895 OSTCQ9NRP0 149 aa11.54□□□□□ -0.56
TSPAN4-213ENST00000524895 IGHV1OR15-1A0A075B7D0 117 aa11.53□□□□□ -0.56
TSPAN4-213ENST00000524895 B4DEV8 164 aa11.53□□□□□ -0.56
TSPAN4-213ENST00000524895 GATCO43716 136 aaKnown RBP11.53□□□□□ -0.56
TSPAN4-213ENST00000524895 SNAPINO95295 136 aa11.53□□□□□ -0.56
TSPAN4-213ENST00000524895 C1orf158Q8N1D5 194 aa11.53□□□□□ -0.56
TSPAN4-213ENST00000524895 CLRN3Q8NCR9 226 aa11.53□□□□□ -0.56
TSPAN4-213ENST00000524895 OR10G8Q8NGN5 311 aa11.53□□□□□ -0.56
TSPAN4-213ENST00000524895 PYGO2Q9BRQ0 406 aa11.53□□□□□ -0.56
TSPAN4-213ENST00000524895 RPP21Q9H633 154 aaKnown RBP11.53□□□□□ -0.56
TSPAN4-213ENST00000524895 C11orf21Q9P2W6 132 aa11.53□□□□□ -0.56
TSPAN4-213ENST00000524895 TMSB15BA0A087X1C1 80 aa11.52□□□□□ -0.57
TSPAN4-213ENST00000524895 TMEM189A5PLL7 270 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms