RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 BRS3P32247 399 aa3.28□□□□□ -1.88
SKP1-213ENST00000524288 RBX1P62877 108 aa3.28□□□□□ -1.88
SKP1-213ENST00000524288 MEF2CQ06413 473 aaPredicted RBP3.28□□□□□ -1.88
SKP1-213ENST00000524288 TFF3Q07654 80 aa3.28□□□□□ -1.88
SKP1-213ENST00000524288 CATR1Q13166 79 aa3.28□□□□□ -1.88
SKP1-213ENST00000524288 IGFBP7Q16270 282 aa3.28□□□□□ -1.88
SKP1-213ENST00000524288 HES3Q5TGS1 186 aa3.28□□□□□ -1.88
SKP1-213ENST00000524288 FAM78BQ5VT40 261 aa3.28□□□□□ -1.88
SKP1-213ENST00000524288 MORN3Q6PF18 240 aaPredicted RBP3.28□□□□□ -1.88
SKP1-213ENST00000524288 DAZ4Q86SG3 579 aaKnown RBP3.28□□□□□ -1.88
SKP1-213ENST00000524288 OR2Y1Q8NGV0 311 aa3.28□□□□□ -1.88
SKP1-213ENST00000524288 OR10D3Q8NH80 312 aa3.28□□□□□ -1.88
SKP1-213ENST00000524288 CMTM2Q8TAZ6 248 aa3.28□□□□□ -1.88
SKP1-213ENST00000524288 DTD1Q8TEA8 209 aa3.28□□□□□ -1.88
SKP1-213ENST00000524288 FXYD5Q96DB9 178 aa3.28□□□□□ -1.88
SKP1-213ENST00000524288 SFRP2Q96HF1 295 aa3.28□□□□□ -1.88
SKP1-213ENST00000524288 HES4Q9HCC6 221 aa3.28□□□□□ -1.88
SKP1-213ENST00000524288 DAZ1Q9NQZ3 744 aaKnown RBP3.28□□□□□ -1.88
SKP1-213ENST00000524288 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.28□□□□□ -1.88
SKP1-213ENST00000524288 IL36BQ9NZH7 164 aa3.28□□□□□ -1.88
SKP1-213ENST00000524288 ZFP30Q9Y2G7 519 aa3.28□□□□□ -1.88
SKP1-213ENST00000524288 TRAPPC1Q9Y5R8 145 aa3.28□□□□□ -1.88
SKP1-213ENST00000524288 A0A0C4DFX4 3053 aa3.28□□□□□ -1.88
SKP1-213ENST00000524288 REV3LO60673 3130 aa3.28□□□□□ -1.88
SKP1-213ENST00000524288 DIDO1Q9BTC0 2240 aaKnown RBP3.27□□□□□ -1.89
SKP1-213ENST00000524288 TRBV20OR9-2A0A075B6H5 130 aa3.27□□□□□ -1.89
SKP1-213ENST00000524288 TRGV10A0A0A0MS01 117 aa3.27□□□□□ -1.89
SKP1-213ENST00000524288 A0A0G2JMM0 328 aa3.27□□□□□ -1.89
SKP1-213ENST00000524288 A0A1W2PPB8 328 aa3.27□□□□□ -1.89
SKP1-213ENST00000524288 A0A1W2PRS3 328 aa3.27□□□□□ -1.89
SKP1-213ENST00000524288 C20orf202A1L168 122 aa3.27□□□□□ -1.89
SKP1-213ENST00000524288 KIR3DP1A8MWS1 328 aa3.27□□□□□ -1.89
SKP1-213ENST00000524288 KLF7O75840 302 aaPredicted RBP3.27□□□□□ -1.89
SKP1-213ENST00000524288 TNFSF15O95150 251 aa3.27□□□□□ -1.89
SKP1-213ENST00000524288 CCL4P13236 92 aa3.27□□□□□ -1.89
SKP1-213ENST00000524288 ZNF25P17030 456 aaPredicted RBP3.27□□□□□ -1.89
SKP1-213ENST00000524288 RPS20P60866 119 aaKnown RBP3.27□□□□□ -1.89
SKP1-213ENST00000524288 RHOBP62745 196 aa3.27□□□□□ -1.89
SKP1-213ENST00000524288 OR10J3Q5JRS4 329 aa3.27□□□□□ -1.89
SKP1-213ENST00000524288 SPANXN5Q5MJ07 72 aa3.27□□□□□ -1.89
SKP1-213ENST00000524288 COL5A1-AS1Q5SY13 56 aa3.27□□□□□ -1.89
SKP1-213ENST00000524288 C1orf174Q8IYL3 243 aa3.27□□□□□ -1.89
SKP1-213ENST00000524288 C17orf78Q8N4C9 275 aa3.27□□□□□ -1.89
SKP1-213ENST00000524288 OR10P1Q8NGE3 313 aa3.27□□□□□ -1.89
SKP1-213ENST00000524288 OR2K2Q8NGT1 345 aa3.27□□□□□ -1.89
SKP1-213ENST00000524288 NEK7Q8TDX7 302 aa3.27□□□□□ -1.89
SKP1-213ENST00000524288 RTL8AQ9BWD3 113 aa3.27□□□□□ -1.89
SKP1-213ENST00000524288 GNB1LQ9BYB4 327 aa3.27□□□□□ -1.89
SKP1-213ENST00000524288 OR2J1Q9GZK6 312 aa3.27□□□□□ -1.89
SKP1-213ENST00000524288 C5orf42Q9H799 3197 aa3.27□□□□□ -1.89
SKP1-213ENST00000524288 TMEM30CPA0ZSE6 113 aa3.26□□□□□ -1.89
SKP1-213ENST00000524288 ITGB1BP1O14713 200 aa3.26□□□□□ -1.89
SKP1-213ENST00000524288 NUPR1O60356 82 aa3.26□□□□□ -1.89
SKP1-213ENST00000524288 S1PR2O95136 353 aa3.26□□□□□ -1.89
SKP1-213ENST00000524288 BRI3O95415 125 aa3.26□□□□□ -1.89
SKP1-213ENST00000524288 OR2H2O95918 312 aa3.26□□□□□ -1.89
SKP1-213ENST00000524288 ATP5G3P48201 142 aa3.26□□□□□ -1.89
SKP1-213ENST00000524288 MORN2Q502X0 79 aa3.26□□□□□ -1.89
SKP1-213ENST00000524288 RASL11AQ6T310 242 aa3.26□□□□□ -1.89
SKP1-213ENST00000524288 FA2HQ7L5A8 372 aa3.26□□□□□ -1.89
SKP1-213ENST00000524288 SGMS2Q8NHU3 365 aa3.26□□□□□ -1.89
SKP1-213ENST00000524288 CCL17Q92583 94 aa3.26□□□□□ -1.89
SKP1-213ENST00000524288 LINC01587Q99440 93 aa3.26□□□□□ -1.89
SKP1-213ENST00000524288 VAMP8Q9BV40 100 aa3.26□□□□□ -1.89
SKP1-213ENST00000524288 OSTCQ9NRP0 149 aa3.26□□□□□ -1.89
SKP1-213ENST00000524288 ZNF586Q9NXT0 402 aa3.26□□□□□ -1.89
SKP1-213ENST00000524288 MRPL27Q9P0M9 148 aaKnown RBP3.26□□□□□ -1.89
SKP1-213ENST00000524288 UQCR10Q9UDW1 63 aa3.26□□□□□ -1.89
SKP1-213ENST00000524288 V9GYV3 84 aa3.26□□□□□ -1.89
SKP1-213ENST00000524288 SDK2Q58EX2 2172 aa3.25□□□□□ -1.89
SKP1-213ENST00000524288 A0A1B0GXF2 115 aa3.25□□□□□ -1.89
SKP1-213ENST00000524288 C5orf49A4QMS7 147 aa3.25□□□□□ -1.89
SKP1-213ENST00000524288 C17orf98A8MV24 154 aa3.25□□□□□ -1.89
SKP1-213ENST00000524288 ZNF705FA8MVS1 300 aaPredicted RBP3.25□□□□□ -1.89
SKP1-213ENST00000524288 IQCF6A8MYZ5 107 aa3.25□□□□□ -1.89
SKP1-213ENST00000524288 C16orf90A8MZG2 172 aa3.25□□□□□ -1.89
SKP1-213ENST00000524288 K7EP13 123 aa3.25□□□□□ -1.89
SKP1-213ENST00000524288 MRPL33O75394 65 aaKnown RBP3.25□□□□□ -1.89
SKP1-213ENST00000524288 MT-CO2P00403 227 aa3.25□□□□□ -1.89
SKP1-213ENST00000524288 GPX1P07203 203 aa3.25□□□□□ -1.89
SKP1-213ENST00000524288 OR5G3P0C626 314 aa3.25□□□□□ -1.89
SKP1-213ENST00000524288 ZNF705DP0CH99 300 aaPredicted RBP3.25□□□□□ -1.89
SKP1-213ENST00000524288 ZNF705BP0CI00 300 aaPredicted RBP3.25□□□□□ -1.89
SKP1-213ENST00000524288 ARL14EPLP0DKL9 152 aa3.25□□□□□ -1.89
SKP1-213ENST00000524288 IGLC2P0DOY2 106 aa3.25□□□□□ -1.89
SKP1-213ENST00000524288 IGLC3P0DOY3 106 aa3.25□□□□□ -1.89
SKP1-213ENST00000524288 G0S2P27469 103 aa3.25□□□□□ -1.89
SKP1-213ENST00000524288 GCHFRP30047 84 aa3.25□□□□□ -1.89
SKP1-213ENST00000524288 RPL30P62888 115 aaKnown RBP3.25□□□□□ -1.89
SKP1-213ENST00000524288 RPL19P84098 196 aaKnown RBP3.25□□□□□ -1.89
SKP1-213ENST00000524288 PLGLB1Q02325 96 aa3.25□□□□□ -1.89
SKP1-213ENST00000524288 RTL8BQ17RB0 113 aa3.25□□□□□ -1.89
SKP1-213ENST00000524288 KPRPQ5T749 579 aaPredicted RBP3.25□□□□□ -1.89
SKP1-213ENST00000524288 TMEM136Q6ZRR5 245 aa3.25□□□□□ -1.89
SKP1-213ENST00000524288 OR2D3Q8NGH3 330 aa3.25□□□□□ -1.89
SKP1-213ENST00000524288 OR4P4Q8NGL7 312 aa3.25□□□□□ -1.89
SKP1-213ENST00000524288 ITLN2Q8WWU7 325 aaPredicted RBP3.25□□□□□ -1.89
SKP1-213ENST00000524288 MGST2Q99735 147 aa3.25□□□□□ -1.89
SKP1-213ENST00000524288 HSPB9Q9BQS6 159 aa3.25□□□□□ -1.89
SKP1-213ENST00000524288 DERL1Q9BUN8 251 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms