RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 Q6ZWC4 215 aa12.98□□□□□ -0.33
SDC2-205ENST00000520233 TMEM183AQ8IXX5 376 aa12.98□□□□□ -0.33
SDC2-205ENST00000520233 EIF4E3Q8N5X7 224 aaKnown RBP12.98□□□□□ -0.33
SDC2-205ENST00000520233 C20orf144Q9BQM9 153 aa12.98□□□□□ -0.33
SDC2-205ENST00000520233 NOTCH1P46531 2555 aa12.97□□□□□ -0.33
SDC2-205ENST00000520233 C7orf71A4D174 169 aa12.97□□□□□ -0.33
SDC2-205ENST00000520233 C9JCJ5 164 aa12.97□□□□□ -0.33
SDC2-205ENST00000520233 RNASE4P34096 147 aaKnown RBP12.97□□□□□ -0.33
SDC2-205ENST00000520233 GNG4P50150 75 aa12.97□□□□□ -0.33
SDC2-205ENST00000520233 BTN1A1Q13410 526 aa12.97□□□□□ -0.33
SDC2-205ENST00000520233 SMUG1Q53HV7 270 aa12.97□□□□□ -0.33
SDC2-205ENST00000520233 CENPWQ5EE01 88 aa12.97□□□□□ -0.33
SDC2-205ENST00000520233 PRR9Q5T870 116 aa12.97□□□□□ -0.33
SDC2-205ENST00000520233 SMIM12Q96EX1 92 aa12.97□□□□□ -0.33
SDC2-205ENST00000520233 B9D2Q9BPU9 175 aa12.97□□□□□ -0.33
SDC2-205ENST00000520233 MLST8Q9BVC4 326 aa12.97□□□□□ -0.33
SDC2-205ENST00000520233 TRBV20OR9-2A0A075B6H5 130 aa12.96□□□□□ -0.33
SDC2-205ENST00000520233 FAM74A3Q4VXF1 159 aa12.96□□□□□ -0.33
SDC2-205ENST00000520233 Q6AWC8 147 aa12.96□□□□□ -0.33
SDC2-205ENST00000520233 SMIM7Q9BQ49 75 aa12.96□□□□□ -0.33
SDC2-205ENST00000520233 TRAV12-3A0A0B4J271 114 aa12.95□□□□□ -0.34
SDC2-205ENST00000520233 ZNF727A8MUV8 499 aa12.95□□□□□ -0.34
SDC2-205ENST00000520233 GCGP01275 180 aa12.95□□□□□ -0.34
SDC2-205ENST00000520233 IGLV2-8P01709 118 aa12.95□□□□□ -0.34
SDC2-205ENST00000520233 DEFB135Q30KP9 77 aa12.95□□□□□ -0.34
SDC2-205ENST00000520233 C1orf158Q8N1D5 194 aa12.95□□□□□ -0.34
SDC2-205ENST00000520233 NHLRC2Q8NBF2 726 aa12.95□□□□□ -0.34
SDC2-205ENST00000520233 RNF183Q96D59 192 aa12.95□□□□□ -0.34
SDC2-205ENST00000520233 ZC2HC1AQ96GY0 325 aa12.95□□□□□ -0.34
SDC2-205ENST00000520233 TP53TG1Q9Y2A0 90 aa12.95□□□□□ -0.34
SDC2-205ENST00000520233 GOLT1BQ9Y3E0 138 aa12.95□□□□□ -0.34
SDC2-205ENST00000520233 ZNF324O75467 553 aaPredicted RBP12.94□□□□□ -0.34
SDC2-205ENST00000520233 SFTA3P0C7M3 94 aa12.94□□□□□ -0.34
SDC2-205ENST00000520233 RBMY1A1P0DJD3 496 aaKnown RBP12.94□□□□□ -0.34
SDC2-205ENST00000520233 RBMY1CP0DJD4 496 aa12.94□□□□□ -0.34
SDC2-205ENST00000520233 ZNF80P51504 273 aaPredicted RBP12.94□□□□□ -0.34
SDC2-205ENST00000520233 RBMY1FQ15415 496 aaKnown RBP12.94□□□□□ -0.34
SDC2-205ENST00000520233 SOHLH1Q5JUK2 328 aa12.94□□□□□ -0.34
SDC2-205ENST00000520233 ZNF705AQ6ZN79 300 aaPredicted RBP12.94□□□□□ -0.34
SDC2-205ENST00000520233 TMEM256Q8N2U0 113 aa12.94□□□□□ -0.34
SDC2-205ENST00000520233 RCHY1Q96PM5 261 aa12.94□□□□□ -0.34
SDC2-205ENST00000520233 TM2D3Q9BRN9 247 aa12.94□□□□□ -0.34
SDC2-205ENST00000520233 NIPSNAP3BQ9BS92 247 aa12.94□□□□□ -0.34
SDC2-205ENST00000520233 TRAV21A0A0B4J279 112 aa12.93□□□□□ -0.34
SDC2-205ENST00000520233 SPRY2O43597 315 aa12.93□□□□□ -0.34
SDC2-205ENST00000520233 LY96Q9Y6Y9 160 aa12.93□□□□□ -0.34
SDC2-205ENST00000520233 PGPEP1LA6NFU8 196 aa12.92□□□□□ -0.34
SDC2-205ENST00000520233 H7BYZ3 331 aa12.92□□□□□ -0.34
SDC2-205ENST00000520233 PFN1P07737 140 aaKnown RBP12.92□□□□□ -0.34
SDC2-205ENST00000520233 CRIP1P50238 77 aa12.92□□□□□ -0.34
SDC2-205ENST00000520233 LINC01587Q99440 93 aa12.92□□□□□ -0.34
SDC2-205ENST00000520233 SPATA25Q9BR10 227 aa12.92□□□□□ -0.34
SDC2-205ENST00000520233 OVOL2Q9BRP0 275 aa12.92□□□□□ -0.34
SDC2-205ENST00000520233 TMEM208Q9BTX3 173 aa12.92□□□□□ -0.34
SDC2-205ENST00000520233 IGHV3OR16-12A0A075B7B8 117 aa12.91□□□□□ -0.34
SDC2-205ENST00000520233 FABP5P3A8MUU1 101 aa12.91□□□□□ -0.34
SDC2-205ENST00000520233 MGST1P10620 155 aaKnown RBP12.91□□□□□ -0.34
SDC2-205ENST00000520233 FAM162BQ5T6X4 162 aa12.91□□□□□ -0.34
SDC2-205ENST00000520233 Q6ZQT7 251 aa12.91□□□□□ -0.34
SDC2-205ENST00000520233 OCC1Q8TAD7 63 aa12.91□□□□□ -0.34
SDC2-205ENST00000520233 NEU1Q99519 415 aa12.91□□□□□ -0.34
SDC2-205ENST00000520233 LINC00467Q9BRT7 94 aa12.91□□□□□ -0.34
SDC2-205ENST00000520233 BIN3Q9NQY0 253 aa12.91□□□□□ -0.34
SDC2-205ENST00000520233 TMEM218A2RU14 115 aa12.9□□□□□ -0.34
SDC2-205ENST00000520233 TMEM241Q24JQ0 296 aa12.9□□□□□ -0.34
SDC2-205ENST00000520233 PYGO2Q9BRQ0 406 aa12.9□□□□□ -0.34
SDC2-205ENST00000520233 RETNQ9HD89 108 aa12.9□□□□□ -0.34
SDC2-205ENST00000520233 SH2D1AO60880 128 aa12.89□□□□□ -0.35
SDC2-205ENST00000520233 PRR27Q6MZM9 219 aa12.89□□□□□ -0.35
SDC2-205ENST00000520233 OR11H2Q8NH07 326 aa12.89□□□□□ -0.35
SDC2-205ENST00000520233 ZMAT4Q9H898 229 aa12.89□□□□□ -0.35
SDC2-205ENST00000520233 NAT8Q9UHE5 227 aa12.89□□□□□ -0.35
SDC2-205ENST00000520233 X6R8D5 127 aa12.89□□□□□ -0.35
SDC2-205ENST00000520233 IGHV1OR15-1A0A075B7D0 117 aa12.88□□□□□ -0.35
SDC2-205ENST00000520233 SMIM9A6NGZ8 99 aa12.88□□□□□ -0.35
SDC2-205ENST00000520233 K7EN84 100 aa12.88□□□□□ -0.35
SDC2-205ENST00000520233 NHLRC4P0CG21 123 aaPredicted RBP12.88□□□□□ -0.35
SDC2-205ENST00000520233 NDUFA5Q16718 116 aa12.88□□□□□ -0.35
SDC2-205ENST00000520233 LINC01551Q86U37 167 aa12.88□□□□□ -0.35
SDC2-205ENST00000520233 MUC21Q5SSG8 566 aa12.87□□□□□ -0.35
SDC2-205ENST00000520233 FAM159AQ6UWV7 190 aa12.87□□□□□ -0.35
SDC2-205ENST00000520233 SDF2L1Q9HCN8 221 aa12.87□□□□□ -0.35
SDC2-205ENST00000520233 C11orf21Q9P2W6 132 aa12.87□□□□□ -0.35
SDC2-205ENST00000520233 C19orf71A6NCJ1 209 aa12.86□□□□□ -0.35
SDC2-205ENST00000520233 ZNF705GA8MUZ8 300 aaPredicted RBP12.86□□□□□ -0.35
SDC2-205ENST00000520233 MIFP14174 115 aa12.86□□□□□ -0.35
SDC2-205ENST00000520233 HTN1P15515 57 aa12.86□□□□□ -0.35
SDC2-205ENST00000520233 RPL23P62829 140 aaKnown RBP12.86□□□□□ -0.35
SDC2-205ENST00000520233 OR5I1Q13606 314 aa12.86□□□□□ -0.35
SDC2-205ENST00000520233 RRN3P1Q2M238 152 aa12.86□□□□□ -0.35
SDC2-205ENST00000520233 TDRG1Q3Y452 100 aa12.86□□□□□ -0.35
SDC2-205ENST00000520233 ANXA2RQ3ZCQ2 193 aa12.86□□□□□ -0.35
SDC2-205ENST00000520233 DAZAP1Q96EP5 407 aaKnown RBP12.86□□□□□ -0.35
SDC2-205ENST00000520233 KCNS1Q96KK3 526 aa12.86□□□□□ -0.35
SDC2-205ENST00000520233 NAGKQ9UJ70 344 aa12.86□□□□□ -0.35
SDC2-205ENST00000520233 F8W036 122 aa12.85□□□□□ -0.35
SDC2-205ENST00000520233 ADCYAP1P18509 176 aa12.85□□□□□ -0.35
SDC2-205ENST00000520233 LINC01559Q495D7 138 aa12.85□□□□□ -0.35
SDC2-205ENST00000520233 SEC11CQ9BY50 192 aa12.85□□□□□ -0.35
SDC2-205ENST00000520233 IGKV3D-20A0A0C4DH25 116 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms