RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 SLIRPQ9GZT3 109 aaKnown RBP8.17□□□□□ -1.1
TRAPPC9-204ENST00000518723 AAMDCQ9H7C9 122 aa8.17□□□□□ -1.1
TRAPPC9-204ENST00000518723 TRAV8-6A0A0B4J262 113 aa8.16□□□□□ -1.1
TRAPPC9-204ENST00000518723 LOC100131303A0A0U1RQF7 123 aa8.16□□□□□ -1.1
TRAPPC9-204ENST00000518723 SCGB1D2O95969 90 aa8.16□□□□□ -1.1
TRAPPC9-204ENST00000518723 RPL29P47914 159 aaKnown RBP8.16□□□□□ -1.1
TRAPPC9-204ENST00000518723 ZNF846Q147U1 533 aa8.16□□□□□ -1.1
TRAPPC9-204ENST00000518723 IAH1Q2TAA2 248 aaPredicted RBP8.16□□□□□ -1.1
TRAPPC9-204ENST00000518723 PKHD1L1Q86WI1 4243 aa8.16□□□□□ -1.1
TRAPPC9-204ENST00000518723 SLC39A9Q9NUM3 307 aa8.16□□□□□ -1.1
TRAPPC9-204ENST00000518723 WDR83OSQ9Y284 106 aa8.16□□□□□ -1.1
TRAPPC9-204ENST00000518723 PYYP10082 97 aa8.15□□□□□ -1.1
TRAPPC9-204ENST00000518723 ZNF138P52744 262 aa8.15□□□□□ -1.1
TRAPPC9-204ENST00000518723 ASAH1Q13510 395 aa8.15□□□□□ -1.1
TRAPPC9-204ENST00000518723 ZNF266Q14584 549 aa8.15□□□□□ -1.1
TRAPPC9-204ENST00000518723 PYDC2Q56P42 97 aa8.15□□□□□ -1.1
TRAPPC9-204ENST00000518723 MUC21Q5SSG8 566 aa8.15□□□□□ -1.1
TRAPPC9-204ENST00000518723 NHLRC2Q8NBF2 726 aa8.15□□□□□ -1.1
TRAPPC9-204ENST00000518723 OR4C5Q8NGB2 326 aa8.15□□□□□ -1.1
TRAPPC9-204ENST00000518723 BCL7BQ9BQE9 202 aa8.15□□□□□ -1.1
TRAPPC9-204ENST00000518723 TRGV11A0A075B6L2 103 aa8.14□□□□□ -1.11
TRAPPC9-204ENST00000518723 MBPP02686 304 aaPredicted RBP8.14□□□□□ -1.11
TRAPPC9-204ENST00000518723 PFN1P07737 140 aaKnown RBP8.14□□□□□ -1.11
TRAPPC9-204ENST00000518723 GATA1P15976 413 aaPredicted RBP8.14□□□□□ -1.11
TRAPPC9-204ENST00000518723 VWC2Q2TAL6 325 aa8.14□□□□□ -1.11
TRAPPC9-204ENST00000518723 LCE2DQ5TA82 110 aaPredicted RBP8.14□□□□□ -1.11
TRAPPC9-204ENST00000518723 FAM122CQ6P4D5 195 aa8.14□□□□□ -1.11
TRAPPC9-204ENST00000518723 Q8TAT8 98 aa8.14□□□□□ -1.11
TRAPPC9-204ENST00000518723 CHAC2Q8WUX2 184 aa8.14□□□□□ -1.11
TRAPPC9-204ENST00000518723 CHAC1Q9BUX1 264 aa8.14□□□□□ -1.11
TRAPPC9-204ENST00000518723 UQCC1Q9NVA1 299 aa8.14□□□□□ -1.11
TRAPPC9-204ENST00000518723 IGHV3-30P01768 117 aa8.13□□□□□ -1.11
TRAPPC9-204ENST00000518723 IGHV3-33P01772 117 aa8.13□□□□□ -1.11
TRAPPC9-204ENST00000518723 IGHV3-30-3P0DP02 117 aa8.13□□□□□ -1.11
TRAPPC9-204ENST00000518723 IGHV3-30-5P0DP03 117 aa8.13□□□□□ -1.11
TRAPPC9-204ENST00000518723 TMEM183BQ1AE95 376 aa8.13□□□□□ -1.11
TRAPPC9-204ENST00000518723 OR10J3Q5JRS4 329 aa8.13□□□□□ -1.11
TRAPPC9-204ENST00000518723 LELP1Q5T871 98 aa8.13□□□□□ -1.11
TRAPPC9-204ENST00000518723 Q6AWC8 147 aa8.13□□□□□ -1.11
TRAPPC9-204ENST00000518723 TMEM183AQ8IXX5 376 aa8.13□□□□□ -1.11
TRAPPC9-204ENST00000518723 C20orf85Q9H1P6 137 aa8.13□□□□□ -1.11
TRAPPC9-204ENST00000518723 GSKIPQ9P0R6 139 aa8.13□□□□□ -1.11
TRAPPC9-204ENST00000518723 V9GYH0 126 aa8.13□□□□□ -1.11
TRAPPC9-204ENST00000518723 RNF213Q63HN8 5207 aa8.13□□□□□ -1.11
TRAPPC9-204ENST00000518723 RBAKDNA6NC62 111 aa8.12□□□□□ -1.11
TRAPPC9-204ENST00000518723 M0R2P5 195 aa8.12□□□□□ -1.11
TRAPPC9-204ENST00000518723 NDUFB6O95139 128 aa8.12□□□□□ -1.11
TRAPPC9-204ENST00000518723 TMBIM6P55061 237 aa8.12□□□□□ -1.11
TRAPPC9-204ENST00000518723 BAK1Q16611 211 aa8.12□□□□□ -1.11
TRAPPC9-204ENST00000518723 FAM159AQ6UWV7 190 aa8.12□□□□□ -1.11
TRAPPC9-204ENST00000518723 MRPS26Q9BYN8 205 aaKnown RBP8.12□□□□□ -1.11
TRAPPC9-204ENST00000518723 GPN1Q9HCN4 374 aaPredicted RBP8.12□□□□□ -1.11
TRAPPC9-204ENST00000518723 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.11□□□□□ -1.11
TRAPPC9-204ENST00000518723 TRAV8-3A0A0A6YYJ7 113 aa8.11□□□□□ -1.11
TRAPPC9-204ENST00000518723 L7N2F9 121 aa8.11□□□□□ -1.11
TRAPPC9-204ENST00000518723 LECT2O14960 151 aa8.11□□□□□ -1.11
TRAPPC9-204ENST00000518723 CST7O76096 145 aa8.11□□□□□ -1.11
TRAPPC9-204ENST00000518723 IGLV2-8P01709 118 aa8.11□□□□□ -1.11
TRAPPC9-204ENST00000518723 NBEAP1P0C6P0 100 aa8.11□□□□□ -1.11
TRAPPC9-204ENST00000518723 VAMP2P63027 116 aa8.11□□□□□ -1.11
TRAPPC9-204ENST00000518723 CIRBP-AS1Q8TBR5 109 aa8.11□□□□□ -1.11
TRAPPC9-204ENST00000518723 MITD1Q8WV92 249 aa8.11□□□□□ -1.11
TRAPPC9-204ENST00000518723 FAM167A-AS1Q96KT0 104 aa8.11□□□□□ -1.11
TRAPPC9-204ENST00000518723 SLC25A2Q9BXI2 301 aa8.11□□□□□ -1.11
TRAPPC9-204ENST00000518723 FLVCR2Q9UPI3 526 aa8.11□□□□□ -1.11
TRAPPC9-204ENST00000518723 LENEPQ9Y5L5 61 aa8.11□□□□□ -1.11
TRAPPC9-204ENST00000518723 IGHV3-16A0A0C4DH30 117 aa8.1□□□□□ -1.11
TRAPPC9-204ENST00000518723 UBE2L5PA0A1B0GUS4 154 aa8.1□□□□□ -1.11
TRAPPC9-204ENST00000518723 RS1O15537 224 aa8.1□□□□□ -1.11
TRAPPC9-204ENST00000518723 BCAP31P51572 246 aa8.1□□□□□ -1.11
TRAPPC9-204ENST00000518723 CAV2P51636 162 aa8.1□□□□□ -1.11
TRAPPC9-204ENST00000518723 BAXQ07812 192 aa8.1□□□□□ -1.11
TRAPPC9-204ENST00000518723 ACOT6Q3I5F7 207 aaPredicted RBP8.1□□□□□ -1.11
TRAPPC9-204ENST00000518723 LINC01620Q4KN68 170 aa8.1□□□□□ -1.11
TRAPPC9-204ENST00000518723 SLC25A29Q8N8R3 303 aa8.1□□□□□ -1.11
TRAPPC9-204ENST00000518723 C11orf1Q9H5F2 150 aa8.1□□□□□ -1.11
TRAPPC9-204ENST00000518723 TRBV6-4A0A1B0GX49 114 aa8.09□□□□□ -1.11
TRAPPC9-204ENST00000518723 NAP1L6A6NFF2 107 aa8.09□□□□□ -1.11
TRAPPC9-204ENST00000518723 FBLL1A6NHQ2 334 aaKnown RBP8.09□□□□□ -1.11
TRAPPC9-204ENST00000518723 CIDEAO60543 219 aa8.09□□□□□ -1.11
TRAPPC9-204ENST00000518723 S100A11P31949 105 aa8.09□□□□□ -1.11
TRAPPC9-204ENST00000518723 RHOHQ15669 191 aa8.09□□□□□ -1.11
TRAPPC9-204ENST00000518723 GCSAMLQ5JQS6 135 aa8.09□□□□□ -1.11
TRAPPC9-204ENST00000518723 PRADC1Q9BSG0 188 aa8.09□□□□□ -1.11
TRAPPC9-204ENST00000518723 GTSF1LQ9H1H1 148 aa8.09□□□□□ -1.11
TRAPPC9-204ENST00000518723 LRP2P98164 4655 aa8.09□□□□□ -1.11
TRAPPC9-204ENST00000518723 RBFOX3A6NFN3 312 aa8.08□□□□□ -1.12
TRAPPC9-204ENST00000518723 FAM24AA6NFZ4 105 aa8.08□□□□□ -1.12
TRAPPC9-204ENST00000518723 H3BMQ9 156 aa8.08□□□□□ -1.12
TRAPPC9-204ENST00000518723 FGF7P21781 194 aa8.08□□□□□ -1.12
TRAPPC9-204ENST00000518723 CSN1S1P47710 185 aa8.08□□□□□ -1.12
TRAPPC9-204ENST00000518723 SULT1A1P50225 295 aa8.08□□□□□ -1.12
TRAPPC9-204ENST00000518723 TOR2AQ5JU69 321 aa8.08□□□□□ -1.12
TRAPPC9-204ENST00000518723 Q8N976 141 aa8.08□□□□□ -1.12
TRAPPC9-204ENST00000518723 TMED6Q8WW62 240 aa8.08□□□□□ -1.12
TRAPPC9-204ENST00000518723 FXYD5Q96DB9 178 aa8.08□□□□□ -1.12
TRAPPC9-204ENST00000518723 PHYHIPLQ96FC7 376 aa8.08□□□□□ -1.12
TRAPPC9-204ENST00000518723 OR51M1Q9H341 326 aa8.08□□□□□ -1.12
TRAPPC9-204ENST00000518723 LSM5Q9Y4Y9 91 aaKnown RBP8.08□□□□□ -1.12
TRAPPC9-204ENST00000518723 COX11Q9Y6N1 276 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms