RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 MYH10P35580 1976 aa-0.27□□□□□ -2.45
SCARNA1-201ENST00000517138 RTL1A6NKG5 1358 aa-0.28□□□□□ -2.45
SCARNA1-201ENST00000517138 EIF3AQ14152 1382 aaKnown RBP-0.28□□□□□ -2.45
SCARNA1-201ENST00000517138 ABCC11Q96J66 1382 aa-0.28□□□□□ -2.45
SCARNA1-201ENST00000517138 KIF20BQ96Q89 1820 aa-0.28□□□□□ -2.45
SCARNA1-201ENST00000517138 NUPR2A6NF83 97 aa-0.28□□□□□ -2.45
SCARNA1-201ENST00000517138 SULT1B1O43704 296 aa-0.28□□□□□ -2.45
SCARNA1-201ENST00000517138 CALUO43852 315 aaPredicted RBP-0.28□□□□□ -2.45
SCARNA1-201ENST00000517138 TCL1BO95988 128 aa-0.28□□□□□ -2.45
SCARNA1-201ENST00000517138 MT1EP04732 61 aa-0.28□□□□□ -2.45
SCARNA1-201ENST00000517138 COX5BP10606 129 aa-0.28□□□□□ -2.45
SCARNA1-201ENST00000517138 MT1GP13640 62 aa-0.28□□□□□ -2.45
SCARNA1-201ENST00000517138 NAA20P61599 178 aa-0.28□□□□□ -2.45
SCARNA1-201ENST00000517138 PSG9Q00887 426 aa-0.28□□□□□ -2.45
SCARNA1-201ENST00000517138 C1orf134Q5TEV5 83 aa-0.28□□□□□ -2.45
SCARNA1-201ENST00000517138 LPCAT4Q643R3 524 aa-0.28□□□□□ -2.45
SCARNA1-201ENST00000517138 COX6B2Q6YFQ2 88 aa-0.28□□□□□ -2.45
SCARNA1-201ENST00000517138 GKN2Q86XP6 184 aa-0.28□□□□□ -2.45
SCARNA1-201ENST00000517138 OR11H6Q8NGC7 330 aa-0.28□□□□□ -2.45
SCARNA1-201ENST00000517138 MRPL30Q8TCC3 161 aaKnown RBP-0.28□□□□□ -2.45
SCARNA1-201ENST00000517138 CMTM5Q96DZ9 223 aa-0.28□□□□□ -2.45
SCARNA1-201ENST00000517138 CMTM6Q9NX76 183 aa-0.28□□□□□ -2.45
SCARNA1-201ENST00000517138 C3orf18Q9UK00 162 aa-0.28□□□□□ -2.45
SCARNA1-201ENST00000517138 NUP155O75694 1391 aa-0.29□□□□□ -2.46
SCARNA1-201ENST00000517138 CXCR6O00574 342 aa-0.29□□□□□ -2.46
SCARNA1-201ENST00000517138 COX6A1P12074 109 aa-0.29□□□□□ -2.46
SCARNA1-201ENST00000517138 RPS12P25398 132 aaKnown RBP-0.29□□□□□ -2.46
SCARNA1-201ENST00000517138 DEFA3P59666 94 aa-0.29□□□□□ -2.46
SCARNA1-201ENST00000517138 CLVS2Q5SYC1 327 aa-0.29□□□□□ -2.46
SCARNA1-201ENST00000517138 SFXN4Q6P4A7 337 aa-0.29□□□□□ -2.46
SCARNA1-201ENST00000517138 OR51D1Q8NGF3 324 aa-0.29□□□□□ -2.46
SCARNA1-201ENST00000517138 MYH4Q9Y623 1939 aa-0.29□□□□□ -2.46
SCARNA1-201ENST00000517138 PQLC2LA1A4F0 135 aa-0.3□□□□□ -2.46
SCARNA1-201ENST00000517138 H0YAA0 97 aa-0.3□□□□□ -2.46
SCARNA1-201ENST00000517138 C8orf88P0DMB2 117 aa-0.3□□□□□ -2.46
SCARNA1-201ENST00000517138 SKP1P63208 163 aa-0.3□□□□□ -2.46
SCARNA1-201ENST00000517138 HBA1P69905 142 aa-0.3□□□□□ -2.46
SCARNA1-201ENST00000517138 CLEC6AQ6EIG7 209 aa-0.3□□□□□ -2.46
SCARNA1-201ENST00000517138 ALKAL1Q6UXT8 129 aa-0.3□□□□□ -2.46
SCARNA1-201ENST00000517138 SIGLECL1Q8N7X8 197 aa-0.3□□□□□ -2.46
SCARNA1-201ENST00000517138 CCL19Q99731 98 aa-0.3□□□□□ -2.46
SCARNA1-201ENST00000517138 TLNRD1Q9H1K6 362 aa-0.3□□□□□ -2.46
SCARNA1-201ENST00000517138 MYH9P35579 1960 aaKnown RBP-0.31□□□□□ -2.46
SCARNA1-201ENST00000517138 LINC00854A0A1B0GVQ3 168 aa-0.31□□□□□ -2.46
SCARNA1-201ENST00000517138 KLF7O75840 302 aaPredicted RBP-0.31□□□□□ -2.46
SCARNA1-201ENST00000517138 DEFA1P59665 94 aa-0.31□□□□□ -2.46
SCARNA1-201ENST00000517138 PDZD9Q8IXQ8 264 aa-0.31□□□□□ -2.46
SCARNA1-201ENST00000517138 CLECL1Q8IZS7 167 aa-0.31□□□□□ -2.46
SCARNA1-201ENST00000517138 TMEM156Q8N614 296 aa-0.31□□□□□ -2.46
SCARNA1-201ENST00000517138 OR51I1Q9H343 314 aa-0.31□□□□□ -2.46
SCARNA1-201ENST00000517138 APLNQ9ULZ1 77 aa-0.31□□□□□ -2.46
SCARNA1-201ENST00000517138 MYH2Q9UKX2 1941 aa-0.31□□□□□ -2.46
SCARNA1-201ENST00000517138 CLPSL1A2RUU4 121 aa-0.32□□□□□ -2.46
SCARNA1-201ENST00000517138 OR2T8A6NH00 312 aa-0.32□□□□□ -2.46
SCARNA1-201ENST00000517138 BUB1B-PAK6H3BSN5 160 aa-0.32□□□□□ -2.46
SCARNA1-201ENST00000517138 TFF1P04155 84 aa-0.32□□□□□ -2.46
SCARNA1-201ENST00000517138 RPL37AP61513 92 aaKnown RBP-0.32□□□□□ -2.46
SCARNA1-201ENST00000517138 Q5XG85 94 aa-0.32□□□□□ -2.46
SCARNA1-201ENST00000517138 PLEKHG7Q6ZR37 379 aa-0.32□□□□□ -2.46
SCARNA1-201ENST00000517138 WFDC9Q8NEX5 89 aa-0.32□□□□□ -2.46
SCARNA1-201ENST00000517138 OR52R1Q8NGF1 315 aa-0.32□□□□□ -2.46
SCARNA1-201ENST00000517138 OR10J5Q8NHC4 309 aa-0.32□□□□□ -2.46
SCARNA1-201ENST00000517138 MIXL1Q9H2W2 232 aa-0.32□□□□□ -2.46
SCARNA1-201ENST00000517138 XPNPEP1Q9NQW7 623 aa-0.32□□□□□ -2.46
SCARNA1-201ENST00000517138 MYOM3Q5VTT5 1437 aa-0.32□□□□□ -2.46
SCARNA1-201ENST00000517138 MYH7P12883 1935 aa-0.32□□□□□ -2.46
SCARNA1-201ENST00000517138 MT1AP04731 61 aa-0.33□□□□□ -2.46
SCARNA1-201ENST00000517138 SPTBP11277 2137 aa-0.33□□□□□ -2.46
SCARNA1-201ENST00000517138 UCHL3P15374 230 aa-0.33□□□□□ -2.46
SCARNA1-201ENST00000517138 CASQ1P31415 396 aa-0.33□□□□□ -2.46
SCARNA1-201ENST00000517138 FDCSPQ8NFU4 85 aa-0.33□□□□□ -2.46
SCARNA1-201ENST00000517138 OR13C4Q8NGS5 318 aa-0.33□□□□□ -2.46
SCARNA1-201ENST00000517138 C11orf68Q9H3H3 251 aaKnown RBP-0.33□□□□□ -2.46
SCARNA1-201ENST00000517138 MRPL40Q9NQ50 206 aaKnown RBP-0.33□□□□□ -2.46
SCARNA1-201ENST00000517138 MYH6P13533 1939 aa-0.33□□□□□ -2.46
SCARNA1-201ENST00000517138 SPINK7P58062 85 aa-0.34□□□□□ -2.46
SCARNA1-201ENST00000517138 MT1XP80297 61 aa-0.34□□□□□ -2.46
SCARNA1-201ENST00000517138 PMAIP1Q13794 54 aa-0.34□□□□□ -2.46
SCARNA1-201ENST00000517138 INSL4Q14641 139 aa-0.34□□□□□ -2.46
SCARNA1-201ENST00000517138 SPINK9Q5DT21 86 aa-0.34□□□□□ -2.46
SCARNA1-201ENST00000517138 Q5VV11 94 aa-0.34□□□□□ -2.46
SCARNA1-201ENST00000517138 LRRN1Q6UXK5 716 aa-0.34□□□□□ -2.46
SCARNA1-201ENST00000517138 TSKUQ8WUA8 353 aa-0.34□□□□□ -2.46
SCARNA1-201ENST00000517138 H1FXQ92522 213 aaKnown RBP-0.34□□□□□ -2.46
SCARNA1-201ENST00000517138 IMUPQ9GZP8 106 aa-0.34□□□□□ -2.46
SCARNA1-201ENST00000517138 CENPHQ9H3R5 247 aa-0.34□□□□□ -2.46
SCARNA1-201ENST00000517138 DPH3P1Q9H4G8 78 aa-0.34□□□□□ -2.46
SCARNA1-201ENST00000517138 FBXL12Q9NXK8 326 aa-0.34□□□□□ -2.46
SCARNA1-201ENST00000517138 EVC2Q86UK5 1308 aa-0.35□□□□□ -2.46
SCARNA1-201ENST00000517138 M0R378 163 aa-0.35□□□□□ -2.47
SCARNA1-201ENST00000517138 IFNA5P01569 189 aa-0.35□□□□□ -2.47
SCARNA1-201ENST00000517138 MYL12AP19105 171 aa-0.35□□□□□ -2.47
SCARNA1-201ENST00000517138 KRTAP26-1Q6PEX3 210 aa-0.35□□□□□ -2.47
SCARNA1-201ENST00000517138 LRRC25Q8N386 305 aaPredicted RBP-0.35□□□□□ -2.47
SCARNA1-201ENST00000517138 TSTD1Q8NFU3 115 aa-0.35□□□□□ -2.47
SCARNA1-201ENST00000517138 RAB8BQ92930 207 aa-0.35□□□□□ -2.47
SCARNA1-201ENST00000517138 EPDR1Q9UM22 224 aa-0.35□□□□□ -2.47
SCARNA1-201ENST00000517138 NINQ8N4C6 2090 aa-0.36□□□□□ -2.47
SCARNA1-201ENST00000517138 ANKARQ7Z5J8 1434 aa-0.36□□□□□ -2.47
SCARNA1-201ENST00000517138 M0QZ92 97 aa-0.36□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms