RNA–Protein interactions for RNA: ENST00000517026.1

SCARNA21-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 139 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21-201ENST00000517026 RAB5CP51148 216 aa10.43□□□□□ -0.74
SCARNA21-201ENST00000517026 C12orf74Q32Q52 190 aa10.43□□□□□ -0.74
SCARNA21-201ENST00000517026 FAM222AQ5U5X8 452 aa10.43□□□□□ -0.74
SCARNA21-201ENST00000517026 CST9LP1Q5W188 147 aa10.43□□□□□ -0.74
SCARNA21-201ENST00000517026 PHLDA1Q8WV24 401 aaPredicted RBP10.43□□□□□ -0.74
SCARNA21-201ENST00000517026 DKK2Q9UBU2 259 aa10.43□□□□□ -0.74
SCARNA21-201ENST00000517026 TRAV34A0A0B4J273 112 aa10.42□□□□□ -0.74
SCARNA21-201ENST00000517026 IGLV2-11P01706 119 aa10.42□□□□□ -0.74
SCARNA21-201ENST00000517026 SPART-AS1P0CW21 52 aa10.42□□□□□ -0.74
SCARNA21-201ENST00000517026 ATP5G3P48201 142 aa10.42□□□□□ -0.74
SCARNA21-201ENST00000517026 Q6ZTC4 211 aa10.42□□□□□ -0.74
SCARNA21-201ENST00000517026 CYB561D1Q8N8Q1 229 aa10.42□□□□□ -0.74
SCARNA21-201ENST00000517026 ATG101Q9BSB4 218 aa10.42□□□□□ -0.74
SCARNA21-201ENST00000517026 PSG8Q9UQ74 426 aa10.42□□□□□ -0.74
SCARNA21-201ENST00000517026 LENEPQ9Y5L5 61 aa10.42□□□□□ -0.74
SCARNA21-201ENST00000517026 SERTM2A0A1B0GWG4 89 aa10.41□□□□□ -0.74
SCARNA21-201ENST00000517026 F6UZH7 168 aa10.41□□□□□ -0.74
SCARNA21-201ENST00000517026 K7EQM0 130 aa10.41□□□□□ -0.74
SCARNA21-201ENST00000517026 PEX7O00628 323 aa10.41□□□□□ -0.74
SCARNA21-201ENST00000517026 CEMP1Q6PRD7 247 aaPredicted RBP10.41□□□□□ -0.74
SCARNA21-201ENST00000517026 ALKAL2Q6UX46 152 aa10.41□□□□□ -0.74
SCARNA21-201ENST00000517026 PRNTQ86SH4 94 aa10.41□□□□□ -0.74
SCARNA21-201ENST00000517026 CCDC28AQ8IWP9 274 aa10.41□□□□□ -0.74
SCARNA21-201ENST00000517026 RNASE8Q8TDE3 154 aaKnown RBP10.41□□□□□ -0.74
SCARNA21-201ENST00000517026 KRTAP17-1Q9BYP8 105 aa10.41□□□□□ -0.74
SCARNA21-201ENST00000517026 NKX6-2Q9C056 277 aaPredicted RBP10.41□□□□□ -0.74
SCARNA21-201ENST00000517026 TREM1Q9NP99 234 aa10.41□□□□□ -0.74
SCARNA21-201ENST00000517026 PLECQ15149 4684 aaKnown RBP10.4□□□□□ -0.74
SCARNA21-201ENST00000517026 TRAV1-1A0A0B4J248 108 aa10.4□□□□□ -0.74
SCARNA21-201ENST00000517026 FLI1Q01543 452 aaPredicted RBP10.4□□□□□ -0.74
SCARNA21-201ENST00000517026 C16orf74Q96GX8 76 aa10.4□□□□□ -0.74
SCARNA21-201ENST00000517026 C8orf49Q96NF6 230 aa10.4□□□□□ -0.74
SCARNA21-201ENST00000517026 PYGO2Q9BRQ0 406 aa10.4□□□□□ -0.74
SCARNA21-201ENST00000517026 RGS13O14921 159 aa10.39□□□□□ -0.75
SCARNA21-201ENST00000517026 MUC21Q5SSG8 566 aa10.39□□□□□ -0.75
SCARNA21-201ENST00000517026 ZNF493Q6ZR52 646 aa10.39□□□□□ -0.75
SCARNA21-201ENST00000517026 TMEM75Q8N9X5 138 aa10.39□□□□□ -0.75
SCARNA21-201ENST00000517026 TMEM263Q8WUH6 116 aaKnown RBP10.39□□□□□ -0.75
SCARNA21-201ENST00000517026 HIST1H2BAQ96A08 127 aa10.39□□□□□ -0.75
SCARNA21-201ENST00000517026 NOP10Q9NPE3 64 aaKnown RBP10.39□□□□□ -0.75
SCARNA21-201ENST00000517026 GNG13Q9P2W3 67 aa10.39□□□□□ -0.75
SCARNA21-201ENST00000517026 TP53TG3Q9ULZ0 132 aa10.39□□□□□ -0.75
SCARNA21-201ENST00000517026 ARL2-SNX15V9GYD0 113 aa10.39□□□□□ -0.75
SCARNA21-201ENST00000517026 IGHV1OR15-1A0A075B7D0 117 aa10.38□□□□□ -0.75
SCARNA21-201ENST00000517026 NUPR2A6NF83 97 aa10.38□□□□□ -0.75
SCARNA21-201ENST00000517026 CBY3A6NI87 242 aa10.38□□□□□ -0.75
SCARNA21-201ENST00000517026 Q6AWC8 147 aa10.38□□□□□ -0.75
SCARNA21-201ENST00000517026 EIF4E3Q8N5X7 224 aaKnown RBP10.38□□□□□ -0.75
SCARNA21-201ENST00000517026 LINC00467Q9BRT7 94 aa10.38□□□□□ -0.75
SCARNA21-201ENST00000517026 NDFIP1Q9BT67 221 aa10.38□□□□□ -0.75
SCARNA21-201ENST00000517026 LCE6AA0A183 80 aa10.37□□□□□ -0.75
SCARNA21-201ENST00000517026 DEFB130BP0DP73 79 aa10.37□□□□□ -0.75
SCARNA21-201ENST00000517026 DEFB130AP0DP74 79 aa10.37□□□□□ -0.75
SCARNA21-201ENST00000517026 PPT1P50897 306 aa10.37□□□□□ -0.75
SCARNA21-201ENST00000517026 ZNF80P51504 273 aaPredicted RBP10.37□□□□□ -0.75
SCARNA21-201ENST00000517026 GSN-AS1Q9NRJ2 163 aa10.37□□□□□ -0.75
SCARNA21-201ENST00000517026 NAGKQ9UJ70 344 aa10.37□□□□□ -0.75
SCARNA21-201ENST00000517026 TIMM8BQ9Y5J9 83 aaPredicted RBP10.37□□□□□ -0.75
SCARNA21-201ENST00000517026 TRAV10A0A0B4J240 114 aa10.36□□□□□ -0.75
SCARNA21-201ENST00000517026 TEX48A0A1B0GUV7 120 aa10.36□□□□□ -0.75
SCARNA21-201ENST00000517026 SCO2A0A1W2PP80 73 aa10.36□□□□□ -0.75
SCARNA21-201ENST00000517026 LYRM9A8MSI8 78 aa10.36□□□□□ -0.75
SCARNA21-201ENST00000517026 C11orf94C9JXX5 98 aa10.36□□□□□ -0.75
SCARNA21-201ENST00000517026 DAD1P61803 113 aa10.36□□□□□ -0.75
SCARNA21-201ENST00000517026 ANXA2RQ3ZCQ2 193 aa10.36□□□□□ -0.75
SCARNA21-201ENST00000517026 Q86TA4 180 aa10.36□□□□□ -0.75
SCARNA21-201ENST00000517026 C11orf72Q8NBR9 251 aa10.36□□□□□ -0.75
SCARNA21-201ENST00000517026 KLK5Q9Y337 293 aaPredicted RBP10.36□□□□□ -0.75
SCARNA21-201ENST00000517026 DEFB131BA0A096LNP1 70 aa10.35□□□□□ -0.75
SCARNA21-201ENST00000517026 TRAV21A0A0B4J279 112 aa10.35□□□□□ -0.75
SCARNA21-201ENST00000517026 FBLL1A6NHQ2 334 aaKnown RBP10.35□□□□□ -0.75
SCARNA21-201ENST00000517026 TEX46H3BTG2 121 aa10.35□□□□□ -0.75
SCARNA21-201ENST00000517026 GCGP01275 180 aa10.35□□□□□ -0.75
SCARNA21-201ENST00000517026 HTN3P15516 51 aa10.35□□□□□ -0.75
SCARNA21-201ENST00000517026 AKR1C3P42330 323 aa10.35□□□□□ -0.75
SCARNA21-201ENST00000517026 SMUG1Q53HV7 270 aa10.35□□□□□ -0.75
SCARNA21-201ENST00000517026 TCEAL7Q9BRU2 100 aa10.35□□□□□ -0.75
SCARNA21-201ENST00000517026 MANBALQ9NQG1 85 aa10.35□□□□□ -0.75
SCARNA21-201ENST00000517026 KLF12Q9Y4X4 402 aa10.35□□□□□ -0.75
SCARNA21-201ENST00000517026 SNURFLB1AK76 121 aa10.34□□□□□ -0.75
SCARNA21-201ENST00000517026 IGLL5B9A064 214 aa10.34□□□□□ -0.75
SCARNA21-201ENST00000517026 GNRH2O43555 120 aa10.34□□□□□ -0.75
SCARNA21-201ENST00000517026 TMEM183BQ1AE95 376 aa10.34□□□□□ -0.75
SCARNA21-201ENST00000517026 SAPCD1Q5SSQ6 148 aa10.34□□□□□ -0.75
SCARNA21-201ENST00000517026 TMEM183AQ8IXX5 376 aa10.34□□□□□ -0.75
SCARNA21-201ENST00000517026 ZNF680Q8NEM1 530 aa10.34□□□□□ -0.75
SCARNA21-201ENST00000517026 C2CD4CQ8TF44 421 aa10.34□□□□□ -0.75
SCARNA21-201ENST00000517026 MDFICQ9P1T7 246 aa10.34□□□□□ -0.75
SCARNA21-201ENST00000517026 C11orf21Q9P2W6 132 aa10.34□□□□□ -0.75
SCARNA21-201ENST00000517026 FRAS1Q86XX4 4008 aa10.34□□□□□ -0.75
SCARNA21-201ENST00000517026 UBE2G1P62253 170 aa10.33□□□□□ -0.76
SCARNA21-201ENST00000517026 BLOC1S1P78537 153 aa10.33□□□□□ -0.76
SCARNA21-201ENST00000517026 DAZ2Q13117 558 aaKnown RBP10.33□□□□□ -0.76
SCARNA21-201ENST00000517026 FAM159AQ6UWV7 190 aa10.33□□□□□ -0.76
SCARNA21-201ENST00000517026 FMC1Q96HJ9 113 aa10.33□□□□□ -0.76
SCARNA21-201ENST00000517026 TRBV6-1A0A0K0K1D8 114 aa10.32□□□□□ -0.76
SCARNA21-201ENST00000517026 GAGE12BA1L429 117 aa10.32□□□□□ -0.76
SCARNA21-201ENST00000517026 GAGE7O76087 117 aa10.32□□□□□ -0.76
SCARNA21-201ENST00000517026 GAGE12FP0CL80 117 aa10.32□□□□□ -0.76
SCARNA21-201ENST00000517026 GAGE12GP0CL81 117 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms