RNA–Protein interactions for RNA: ENST00000515289.2

NPHP3-211, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 556 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-211ENST00000515289 DOPEY1Q5JWR5 2465 aa4.64□□□□□ -1.67
NPHP3-211ENST00000515289 TET2Q6N021 2002 aaPredicted RBP4.64□□□□□ -1.67
NPHP3-211ENST00000515289 A0A1B0GV50 99 aa4.64□□□□□ -1.67
NPHP3-211ENST00000515289 C8orf87E5RJ46 101 aa4.64□□□□□ -1.67
NPHP3-211ENST00000515289 F8W036 122 aa4.64□□□□□ -1.67
NPHP3-211ENST00000515289 FOXH1O75593 365 aa4.64□□□□□ -1.67
NPHP3-211ENST00000515289 YIF1AO95070 293 aa4.64□□□□□ -1.67
NPHP3-211ENST00000515289 CNTFRP26992 372 aa4.64□□□□□ -1.67
NPHP3-211ENST00000515289 PEA15Q15121 130 aa4.64□□□□□ -1.67
NPHP3-211ENST00000515289 VMA21Q3ZAQ7 101 aa4.64□□□□□ -1.67
NPHP3-211ENST00000515289 C2orf83Q53S99 150 aa4.64□□□□□ -1.67
NPHP3-211ENST00000515289 MPV17L2Q567V2 206 aa4.64□□□□□ -1.67
NPHP3-211ENST00000515289 CLDND2Q8NHS1 167 aa4.64□□□□□ -1.67
NPHP3-211ENST00000515289 VSTM2AQ8TAG5 236 aa4.64□□□□□ -1.67
NPHP3-211ENST00000515289 SFT2D1Q8WV19 159 aa4.64□□□□□ -1.67
NPHP3-211ENST00000515289 TMEM158Q8WZ71 300 aa4.64□□□□□ -1.67
NPHP3-211ENST00000515289 BPESC1Q9GZL8 116 aa4.64□□□□□ -1.67
NPHP3-211ENST00000515289 FBXL15Q9H469 300 aa4.64□□□□□ -1.67
NPHP3-211ENST00000515289 ZNF430Q9H8G1 570 aaPredicted RBP4.64□□□□□ -1.67
NPHP3-211ENST00000515289 ENY2Q9NPA8 101 aa4.64□□□□□ -1.67
NPHP3-211ENST00000515289 FKBP11Q9NYL4 201 aa4.64□□□□□ -1.67
NPHP3-211ENST00000515289 RBM12B-AS1Q9P1G2 102 aa4.64□□□□□ -1.67
NPHP3-211ENST00000515289 CFAP46Q8IYW2 2715 aa4.64□□□□□ -1.67
NPHP3-211ENST00000515289 HRNRQ86YZ3 2850 aaPredicted RBP4.63□□□□□ -1.67
NPHP3-211ENST00000515289 A0A0U1RQV1 116 aa4.63□□□□□ -1.67
NPHP3-211ENST00000515289 CTXND1A0A1B0GTU2 59 aa4.63□□□□□ -1.67
NPHP3-211ENST00000515289 IGLC7A0M8Q6 106 aa4.63□□□□□ -1.67
NPHP3-211ENST00000515289 MAP1LC3B2A6NCE7 125 aa4.63□□□□□ -1.67
NPHP3-211ENST00000515289 KLLNB2CW77 178 aa4.63□□□□□ -1.67
NPHP3-211ENST00000515289 IFNA4P05014 189 aa4.63□□□□□ -1.67
NPHP3-211ENST00000515289 SRP19P09132 144 aaKnown RBP4.63□□□□□ -1.67
NPHP3-211ENST00000515289 BCL2P10415 239 aa4.63□□□□□ -1.67
NPHP3-211ENST00000515289 GATA2P23769 480 aaPredicted RBP4.63□□□□□ -1.67
NPHP3-211ENST00000515289 OPRK1P41145 380 aa4.63□□□□□ -1.67
NPHP3-211ENST00000515289 RANP62826 216 aaKnown RBP4.63□□□□□ -1.67
NPHP3-211ENST00000515289 DEFA5Q01523 94 aa4.63□□□□□ -1.67
NPHP3-211ENST00000515289 WT1-ASQ06250 92 aa4.63□□□□□ -1.67
NPHP3-211ENST00000515289 LCN15Q6UWW0 184 aa4.63□□□□□ -1.67
NPHP3-211ENST00000515289 SVBPQ8N300 66 aa4.63□□□□□ -1.67
NPHP3-211ENST00000515289 LINC01006Q8NI28 216 aa4.63□□□□□ -1.67
NPHP3-211ENST00000515289 ORAOV1Q8WV07 137 aa4.63□□□□□ -1.67
NPHP3-211ENST00000515289 PBDC1Q9BVG4 233 aa4.63□□□□□ -1.67
NPHP3-211ENST00000515289 NKX6-2Q9C056 277 aaPredicted RBP4.63□□□□□ -1.67
NPHP3-211ENST00000515289 MAP1LC3BQ9GZQ8 125 aa4.63□□□□□ -1.67
NPHP3-211ENST00000515289 GFRA4Q9GZZ7 299 aa4.63□□□□□ -1.67
NPHP3-211ENST00000515289 SLC35B3Q9H1N7 401 aa4.63□□□□□ -1.67
NPHP3-211ENST00000515289 SMDT1Q9H4I9 107 aa4.63□□□□□ -1.67
NPHP3-211ENST00000515289 IGSF10Q6WRI0 2623 aa4.63□□□□□ -1.67
NPHP3-211ENST00000515289 YLPM1P49750 1951 aaKnown RBP4.63□□□□□ -1.67
NPHP3-211ENST00000515289 CACNA1BQ00975 2339 aa4.63□□□□□ -1.67
NPHP3-211ENST00000515289 SMG1Q96Q15 3661 aaKnown RBP4.63□□□□□ -1.67
NPHP3-211ENST00000515289 TNCP24821 2201 aa4.62□□□□□ -1.67
NPHP3-211ENST00000515289 IGKV1OR2-108A0A075B7D4 117 aa4.62□□□□□ -1.67
NPHP3-211ENST00000515289 TRAV8-3A0A0A6YYJ7 113 aa4.62□□□□□ -1.67
NPHP3-211ENST00000515289 C17orf112F2Z3M2 114 aa4.62□□□□□ -1.67
NPHP3-211ENST00000515289 NDUFA3O95167 84 aa4.62□□□□□ -1.67
NPHP3-211ENST00000515289 IGHV3-11P01762 117 aa4.62□□□□□ -1.67
NPHP3-211ENST00000515289 LINC00869P0C866 280 aa4.62□□□□□ -1.67
NPHP3-211ENST00000515289 DEFA4P12838 97 aa4.62□□□□□ -1.67
NPHP3-211ENST00000515289 RPL27AP46776 148 aaKnown RBP4.62□□□□□ -1.67
NPHP3-211ENST00000515289 BTN1A1Q13410 526 aa4.62□□□□□ -1.67
NPHP3-211ENST00000515289 ACOT6Q3I5F7 207 aaPredicted RBP4.62□□□□□ -1.67
NPHP3-211ENST00000515289 KHDC3LQ587J8 217 aa4.62□□□□□ -1.67
NPHP3-211ENST00000515289 MINOS1Q5TGZ0 78 aa4.62□□□□□ -1.67
NPHP3-211ENST00000515289 MIC13Q5XKP0 118 aa4.62□□□□□ -1.67
NPHP3-211ENST00000515289 VMO1Q7Z5L0 202 aa4.62□□□□□ -1.67
NPHP3-211ENST00000515289 TMEM144Q7Z5S9 345 aa4.62□□□□□ -1.67
NPHP3-211ENST00000515289 PRNTQ86SH4 94 aa4.62□□□□□ -1.67
NPHP3-211ENST00000515289 DYNAPQ8N1N2 210 aa4.62□□□□□ -1.67
NPHP3-211ENST00000515289 Q8N6K4 173 aa4.62□□□□□ -1.67
NPHP3-211ENST00000515289 FAM210BQ96KR6 192 aa4.62□□□□□ -1.67
NPHP3-211ENST00000515289 RNF5Q99942 180 aa4.62□□□□□ -1.67
NPHP3-211ENST00000515289 COMMD5Q9GZQ3 224 aa4.62□□□□□ -1.67
NPHP3-211ENST00000515289 EIF5A2Q9GZV4 153 aaKnown RBP4.62□□□□□ -1.67
NPHP3-211ENST00000515289 NPVFQ9HCQ7 196 aa4.62□□□□□ -1.67
NPHP3-211ENST00000515289 PXMP4Q9Y6I8 212 aa4.62□□□□□ -1.67
NPHP3-211ENST00000515289 MINOS1-NBL1R4GNA1 71 aa4.62□□□□□ -1.67
NPHP3-211ENST00000515289 NBEAQ8NFP9 2946 aa4.62□□□□□ -1.67
NPHP3-211ENST00000515289 DOCK11Q5JSL3 2073 aa4.61□□□□□ -1.67
NPHP3-211ENST00000515289 KALRNO60229 2985 aa4.61□□□□□ -1.67
NPHP3-211ENST00000515289 ZFYVE26Q68DK2 2539 aa4.61□□□□□ -1.67
NPHP3-211ENST00000515289 A0A1B0GVX0 72 aa4.61□□□□□ -1.67
NPHP3-211ENST00000515289 OOSP1A8MZH6 123 aa4.61□□□□□ -1.67
NPHP3-211ENST00000515289 FBP1P09467 338 aa4.61□□□□□ -1.67
NPHP3-211ENST00000515289 OR13C7P0DN81 318 aa4.61□□□□□ -1.67
NPHP3-211ENST00000515289 ERHP84090 104 aaKnown RBP4.61□□□□□ -1.67
NPHP3-211ENST00000515289 EBI3Q14213 229 aa4.61□□□□□ -1.67
NPHP3-211ENST00000515289 SPATA31B1PQ5VZV4 182 aa4.61□□□□□ -1.67
NPHP3-211ENST00000515289 SLC16A13Q7RTY0 426 aa4.61□□□□□ -1.67
NPHP3-211ENST00000515289 PCP2Q8IVA1 136 aa4.61□□□□□ -1.67
NPHP3-211ENST00000515289 CYB561D1Q8N8Q1 229 aa4.61□□□□□ -1.67
NPHP3-211ENST00000515289 C15orf56Q8N910 161 aa4.61□□□□□ -1.67
NPHP3-211ENST00000515289 ZNF709Q8N972 641 aa4.61□□□□□ -1.67
NPHP3-211ENST00000515289 C10orf105Q8TEF2 133 aa4.61□□□□□ -1.67
NPHP3-211ENST00000515289 CCL19Q99731 98 aa4.61□□□□□ -1.67
NPHP3-211ENST00000515289 KCNIP2Q9NS61 270 aa4.61□□□□□ -1.67
NPHP3-211ENST00000515289 SLC39A9Q9NUM3 307 aa4.61□□□□□ -1.67
NPHP3-211ENST00000515289 MRPL36Q9P0J6 103 aaKnown RBP4.61□□□□□ -1.67
NPHP3-211ENST00000515289 GNG13Q9P2W3 67 aa4.61□□□□□ -1.67
NPHP3-211ENST00000515289 METTL1Q9UBP6 276 aaKnown RBP4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms