RNA–Protein interactions for RNA: ENST00000514660.1

NEDD9-215, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 473 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-215ENST00000514660 NARS2Q96I59 477 aaKnown RBP7.08□□□□□ -1.28
NEDD9-215ENST00000514660 TMEM208Q9BTX3 173 aa7.08□□□□□ -1.28
NEDD9-215ENST00000514660 SLC25A39Q9BZJ4 359 aaPredicted RBP7.08□□□□□ -1.28
NEDD9-215ENST00000514660 KCNIP2Q9NS61 270 aa7.08□□□□□ -1.28
NEDD9-215ENST00000514660 HIGD1AQ9Y241 93 aa7.08□□□□□ -1.28
NEDD9-215ENST00000514660 TRAV12-2A0A075B6T6 113 aa7.07□□□□□ -1.28
NEDD9-215ENST00000514660 IGLV5-52A0A0A0MRZ9 124 aa7.07□□□□□ -1.28
NEDD9-215ENST00000514660 LRCOL1A6NCL2 159 aa7.07□□□□□ -1.28
NEDD9-215ENST00000514660 ZNF98A6NK75 572 aa7.07□□□□□ -1.28
NEDD9-215ENST00000514660 SIVA1O15304 175 aa7.07□□□□□ -1.28
NEDD9-215ENST00000514660 COX7A2P2O60397 106 aa7.07□□□□□ -1.28
NEDD9-215ENST00000514660 MBP02144 154 aa7.07□□□□□ -1.28
NEDD9-215ENST00000514660 HNRNPA3P51991 378 aaKnown RBP7.07□□□□□ -1.28
NEDD9-215ENST00000514660 AKR1C8PQ5T2L2 129 aa7.07□□□□□ -1.28
NEDD9-215ENST00000514660 C10orf113Q5VZT2 155 aa7.07□□□□□ -1.28
NEDD9-215ENST00000514660 EIF5AL1Q6IS14 154 aaKnown RBP7.07□□□□□ -1.28
NEDD9-215ENST00000514660 FAM122CQ6P4D5 195 aa7.07□□□□□ -1.28
NEDD9-215ENST00000514660 MIR17HGQ75NE6 70 aa7.07□□□□□ -1.28
NEDD9-215ENST00000514660 LINC00305Q7Z4B0 112 aa7.07□□□□□ -1.28
NEDD9-215ENST00000514660 OR1L4Q8NGR5 311 aa7.07□□□□□ -1.28
NEDD9-215ENST00000514660 FAM167A-AS1Q96KT0 104 aa7.07□□□□□ -1.28
NEDD9-215ENST00000514660 SHANK2-AS3Q9BTD1 123 aa7.07□□□□□ -1.28
NEDD9-215ENST00000514660 NOP10Q9NPE3 64 aaKnown RBP7.07□□□□□ -1.28
NEDD9-215ENST00000514660 TNXBP22105 4242 aa7.06□□□□□ -1.28
NEDD9-215ENST00000514660 UMAD1C9J7I0 102 aa7.06□□□□□ -1.28
NEDD9-215ENST00000514660 H3BRN7 92 aa7.06□□□□□ -1.28
NEDD9-215ENST00000514660 NXPH4O95158 308 aa7.06□□□□□ -1.28
NEDD9-215ENST00000514660 PRB4P10163 310 aaPredicted RBP7.06□□□□□ -1.28
NEDD9-215ENST00000514660 PSMB3P49720 205 aa7.06□□□□□ -1.28
NEDD9-215ENST00000514660 RHOBP62745 196 aa7.06□□□□□ -1.28
NEDD9-215ENST00000514660 RAB24Q969Q5 203 aa7.06□□□□□ -1.28
NEDD9-215ENST00000514660 PFDN5Q99471 154 aa7.06□□□□□ -1.28
NEDD9-215ENST00000514660 ACTR3CQ9C0K3 210 aaPredicted RBP7.06□□□□□ -1.28
NEDD9-215ENST00000514660 FUT9Q9Y231 359 aa7.06□□□□□ -1.28
NEDD9-215ENST00000514660 MRPS12O15235 138 aaKnown RBP7.05□□□□□ -1.28
NEDD9-215ENST00000514660 HMGB3O15347 200 aaKnown RBP7.05□□□□□ -1.28
NEDD9-215ENST00000514660 IFNA7P01567 189 aa7.05□□□□□ -1.28
NEDD9-215ENST00000514660 RAB5CP51148 216 aa7.05□□□□□ -1.28
NEDD9-215ENST00000514660 FAM213BQ8TBF2 198 aa7.05□□□□□ -1.28
NEDD9-215ENST00000514660 RNASE8Q8TDE3 154 aaKnown RBP7.05□□□□□ -1.28
NEDD9-215ENST00000514660 MBD3L1Q8WWY6 194 aa7.05□□□□□ -1.28
NEDD9-215ENST00000514660 SLC25A2Q9BXI2 301 aa7.05□□□□□ -1.28
NEDD9-215ENST00000514660 KRTAP9-6A0A140TA67 174 aa7.04□□□□□ -1.28
NEDD9-215ENST00000514660 CTXND1A0A1B0GTU2 59 aa7.04□□□□□ -1.28
NEDD9-215ENST00000514660 A0A1W2PPV4 95 aa7.04□□□□□ -1.28
NEDD9-215ENST00000514660 H3BNG1 76 aa7.04□□□□□ -1.28
NEDD9-215ENST00000514660 INSP01308 110 aa7.04□□□□□ -1.28
NEDD9-215ENST00000514660 STAG3L2P0CL84 134 aa7.04□□□□□ -1.28
NEDD9-215ENST00000514660 STAG3L3P0CL85 134 aa7.04□□□□□ -1.28
NEDD9-215ENST00000514660 CDC34P49427 236 aaPredicted RBP7.04□□□□□ -1.28
NEDD9-215ENST00000514660 CNN1P51911 297 aaKnown RBP7.04□□□□□ -1.28
NEDD9-215ENST00000514660 C1orf194Q5T5A4 169 aa7.04□□□□□ -1.28
NEDD9-215ENST00000514660 IGFL4Q6B9Z1 124 aa7.04□□□□□ -1.28
NEDD9-215ENST00000514660 EBLN2Q6P2I7 272 aa7.04□□□□□ -1.28
NEDD9-215ENST00000514660 DPPA3Q6W0C5 159 aa7.04□□□□□ -1.28
NEDD9-215ENST00000514660 PCNPQ8WW12 178 aaKnown RBP7.04□□□□□ -1.28
NEDD9-215ENST00000514660 MRPL32Q9BYC8 188 aaKnown RBP7.04□□□□□ -1.28
NEDD9-215ENST00000514660 SLC25A22Q9H936 323 aa7.04□□□□□ -1.28
NEDD9-215ENST00000514660 TIMM8BQ9Y5J9 83 aaPredicted RBP7.04□□□□□ -1.28
NEDD9-215ENST00000514660 H3BQ15 152 aa7.03□□□□□ -1.28
NEDD9-215ENST00000514660 CCL20P78556 96 aa7.03□□□□□ -1.28
NEDD9-215ENST00000514660 KIR3DS1Q14943 382 aa7.03□□□□□ -1.28
NEDD9-215ENST00000514660 LCN15Q6UWW0 184 aa7.03□□□□□ -1.28
NEDD9-215ENST00000514660 OR8I2Q8N0Y5 310 aa7.03□□□□□ -1.28
NEDD9-215ENST00000514660 SFT2D1Q8WV19 159 aa7.03□□□□□ -1.28
NEDD9-215ENST00000514660 SAT2Q96F10 170 aaPredicted RBP7.03□□□□□ -1.28
NEDD9-215ENST00000514660 TMPRSS5Q9H3S3 457 aa7.03□□□□□ -1.28
NEDD9-215ENST00000514660 TRAV1-1A0A0B4J248 108 aa7.02□□□□□ -1.29
NEDD9-215ENST00000514660 GAGE12BA1L429 117 aa7.02□□□□□ -1.29
NEDD9-215ENST00000514660 ISLRO14498 428 aa7.02□□□□□ -1.29
NEDD9-215ENST00000514660 GAGE7O76087 117 aa7.02□□□□□ -1.29
NEDD9-215ENST00000514660 SNRPCP09234 159 aaKnown RBP7.02□□□□□ -1.29
NEDD9-215ENST00000514660 H2AFB1P0C5Y9 115 aa7.02□□□□□ -1.29
NEDD9-215ENST00000514660 GAGE12FP0CL80 117 aa7.02□□□□□ -1.29
NEDD9-215ENST00000514660 GAGE12GP0CL81 117 aa7.02□□□□□ -1.29
NEDD9-215ENST00000514660 GAGE12IP0CL82 117 aa7.02□□□□□ -1.29
NEDD9-215ENST00000514660 PYYP10082 97 aa7.02□□□□□ -1.29
NEDD9-215ENST00000514660 HTN1P15515 57 aa7.02□□□□□ -1.29
NEDD9-215ENST00000514660 LORP23490 312 aaPredicted RBP7.02□□□□□ -1.29
NEDD9-215ENST00000514660 S100A7P31151 101 aa7.02□□□□□ -1.29
NEDD9-215ENST00000514660 ID1P41134 155 aa7.02□□□□□ -1.29
NEDD9-215ENST00000514660 FGF8P55075 233 aaPredicted RBP7.02□□□□□ -1.29
NEDD9-215ENST00000514660 BLOC1S1P78537 153 aa7.02□□□□□ -1.29
NEDD9-215ENST00000514660 SCXQ7RTU7 201 aa7.02□□□□□ -1.29
NEDD9-215ENST00000514660 S100A7AQ86SG5 101 aa7.02□□□□□ -1.29
NEDD9-215ENST00000514660 LYPD6BQ8NI32 183 aa7.02□□□□□ -1.29
NEDD9-215ENST00000514660 SUN5Q8TC36 379 aa7.02□□□□□ -1.29
NEDD9-215ENST00000514660 FXYD5Q96DB9 178 aa7.02□□□□□ -1.29
NEDD9-215ENST00000514660 ANAPC16Q96DE5 110 aa7.02□□□□□ -1.29
NEDD9-215ENST00000514660 LINC01587Q99440 93 aa7.02□□□□□ -1.29
NEDD9-215ENST00000514660 PAXXQ9BUH6 204 aa7.02□□□□□ -1.29
NEDD9-215ENST00000514660 OR51M1Q9H341 326 aa7.02□□□□□ -1.29
NEDD9-215ENST00000514660 TMEM14CQ9P0S9 112 aa7.02□□□□□ -1.29
NEDD9-215ENST00000514660 PFDN2Q9UHV9 154 aa7.02□□□□□ -1.29
NEDD9-215ENST00000514660 TRAV8-2A0A0B4J237 113 aa7.01□□□□□ -1.29
NEDD9-215ENST00000514660 A0A1B0GV50 99 aa7.01□□□□□ -1.29
NEDD9-215ENST00000514660 MAP1LC3B2A6NCE7 125 aa7.01□□□□□ -1.29
NEDD9-215ENST00000514660 RGS13O14921 159 aa7.01□□□□□ -1.29
NEDD9-215ENST00000514660 NMBP08949 121 aa7.01□□□□□ -1.29
NEDD9-215ENST00000514660 OR10J4P0C629 311 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms