RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 RPL37AP61513 92 aaKnown RBP7.16□□□□□ -1.26
DDX41-216ENST00000513562 PDE6HQ13956 83 aa7.16□□□□□ -1.26
DDX41-216ENST00000513562 MUC21Q5SSG8 566 aa7.16□□□□□ -1.26
DDX41-216ENST00000513562 LELP1Q5T871 98 aa7.16□□□□□ -1.26
DDX41-216ENST00000513562 Q6ZRG5 221 aa7.16□□□□□ -1.26
DDX41-216ENST00000513562 OR4C5Q8NGB2 326 aa7.16□□□□□ -1.26
DDX41-216ENST00000513562 OR1L4Q8NGR5 311 aa7.16□□□□□ -1.26
DDX41-216ENST00000513562 BCL7BQ9BQE9 202 aa7.16□□□□□ -1.26
DDX41-216ENST00000513562 NDUFA13Q9P0J0 144 aa7.16□□□□□ -1.26
DDX41-216ENST00000513562 TMEM14CQ9P0S9 112 aa7.16□□□□□ -1.26
DDX41-216ENST00000513562 TRBV7-9A0A0J9YWB2 115 aa7.15□□□□□ -1.26
DDX41-216ENST00000513562 RBFOX3A6NFN3 312 aa7.15□□□□□ -1.26
DDX41-216ENST00000513562 IGLV2-11P01706 119 aa7.15□□□□□ -1.26
DDX41-216ENST00000513562 PFN1P07737 140 aaKnown RBP7.15□□□□□ -1.26
DDX41-216ENST00000513562 FAUP35544 74 aaKnown RBP7.15□□□□□ -1.26
DDX41-216ENST00000513562 CAMLGP49069 296 aa7.15□□□□□ -1.26
DDX41-216ENST00000513562 TMBIM6P55061 237 aa7.15□□□□□ -1.26
DDX41-216ENST00000513562 EXOC3-AS1Q8N2X6 119 aa7.15□□□□□ -1.26
DDX41-216ENST00000513562 PFDN5Q99471 154 aa7.15□□□□□ -1.26
DDX41-216ENST00000513562 SOSTQ9BQB4 213 aa7.15□□□□□ -1.26
DDX41-216ENST00000513562 BATF3Q9NR55 127 aa7.15□□□□□ -1.26
DDX41-216ENST00000513562 RSL24D1Q9UHA3 163 aaKnown RBP7.15□□□□□ -1.26
DDX41-216ENST00000513562 TIMM9Q9Y5J7 89 aa7.15□□□□□ -1.26
DDX41-216ENST00000513562 TRGV11A0A075B6L2 103 aa7.14□□□□□ -1.27
DDX41-216ENST00000513562 TRAV8-3A0A0A6YYJ7 113 aa7.14□□□□□ -1.27
DDX41-216ENST00000513562 ZNF138P52744 262 aa7.14□□□□□ -1.27
DDX41-216ENST00000513562 TAS2R30P59541 319 aa7.14□□□□□ -1.27
DDX41-216ENST00000513562 ZNF266Q14584 549 aa7.14□□□□□ -1.27
DDX41-216ENST00000513562 TMEM183BQ1AE95 376 aa7.14□□□□□ -1.27
DDX41-216ENST00000513562 MIC13Q5XKP0 118 aa7.14□□□□□ -1.27
DDX41-216ENST00000513562 NRARPQ7Z6K4 114 aa7.14□□□□□ -1.27
DDX41-216ENST00000513562 TMEM183AQ8IXX5 376 aa7.14□□□□□ -1.27
DDX41-216ENST00000513562 Q8N3U1 123 aa7.14□□□□□ -1.27
DDX41-216ENST00000513562 C12orf45Q8N5I9 185 aaPredicted RBP7.14□□□□□ -1.27
DDX41-216ENST00000513562 Q8TAT8 98 aa7.14□□□□□ -1.27
DDX41-216ENST00000513562 BAALCQ8WXS3 180 aa7.14□□□□□ -1.27
DDX41-216ENST00000513562 SLC25A21Q9BQT8 299 aaPredicted RBP7.14□□□□□ -1.27
DDX41-216ENST00000513562 IGHV3-16A0A0C4DH30 117 aa7.13□□□□□ -1.27
DDX41-216ENST00000513562 FABP12A6NFH5 140 aa7.13□□□□□ -1.27
DDX41-216ENST00000513562 PYYP10082 97 aa7.13□□□□□ -1.27
DDX41-216ENST00000513562 RAB31Q13636 194 aa7.13□□□□□ -1.27
DDX41-216ENST00000513562 Q6AWC8 147 aa7.13□□□□□ -1.27
DDX41-216ENST00000513562 SLC25A29Q8N8R3 303 aa7.13□□□□□ -1.27
DDX41-216ENST00000513562 Q8N976 141 aa7.13□□□□□ -1.27
DDX41-216ENST00000513562 MCFD2Q8NI22 146 aa7.13□□□□□ -1.27
DDX41-216ENST00000513562 TRIM63Q969Q1 353 aa7.13□□□□□ -1.27
DDX41-216ENST00000513562 AAMDCQ9H7C9 122 aa7.13□□□□□ -1.27
DDX41-216ENST00000513562 COX11Q9Y6N1 276 aa7.13□□□□□ -1.27
DDX41-216ENST00000513562 RNF222A6NCQ9 220 aa7.12□□□□□ -1.27
DDX41-216ENST00000513562 H3BMQ9 156 aa7.12□□□□□ -1.27
DDX41-216ENST00000513562 M0R2P5 195 aa7.12□□□□□ -1.27
DDX41-216ENST00000513562 UBE2MP61081 183 aaKnown RBP7.12□□□□□ -1.27
DDX41-216ENST00000513562 BAK1Q16611 211 aa7.12□□□□□ -1.27
DDX41-216ENST00000513562 TOR2AQ5JU69 321 aa7.12□□□□□ -1.27
DDX41-216ENST00000513562 FAM122CQ6P4D5 195 aa7.12□□□□□ -1.27
DDX41-216ENST00000513562 FAM159AQ6UWV7 190 aa7.12□□□□□ -1.27
DDX41-216ENST00000513562 ATP6V0E2Q8NHE4 81 aa7.12□□□□□ -1.27
DDX41-216ENST00000513562 RBM38Q9H0Z9 239 aaKnown RBP7.12□□□□□ -1.27
DDX41-216ENST00000513562 GTSF1LQ9H1H1 148 aa7.12□□□□□ -1.27
DDX41-216ENST00000513562 TRBV6-4A0A1B0GX49 114 aa7.11□□□□□ -1.27
DDX41-216ENST00000513562 C9orf170A2RU37 121 aa7.11□□□□□ -1.27
DDX41-216ENST00000513562 C7orf66A4D0T2 115 aa7.11□□□□□ -1.27
DDX41-216ENST00000513562 FBLL1A6NHQ2 334 aaKnown RBP7.11□□□□□ -1.27
DDX41-216ENST00000513562 SCGB1D2O95969 90 aa7.11□□□□□ -1.27
DDX41-216ENST00000513562 ASIPP42127 132 aa7.11□□□□□ -1.27
DDX41-216ENST00000513562 RPL29P47914 159 aaKnown RBP7.11□□□□□ -1.27
DDX41-216ENST00000513562 AP3S2P59780 193 aa7.11□□□□□ -1.27
DDX41-216ENST00000513562 SPCS2Q15005 226 aa7.11□□□□□ -1.27
DDX41-216ENST00000513562 RHOHQ15669 191 aa7.11□□□□□ -1.27
DDX41-216ENST00000513562 DAZ4Q86SG3 579 aaKnown RBP7.11□□□□□ -1.27
DDX41-216ENST00000513562 PRADC1Q9BSG0 188 aa7.11□□□□□ -1.27
DDX41-216ENST00000513562 DAZ3Q9NR90 486 aaKnown RBP7.11□□□□□ -1.27
DDX41-216ENST00000513562 SLC39A9Q9NUM3 307 aa7.11□□□□□ -1.27
DDX41-216ENST00000513562 WDR83OSQ9Y284 106 aa7.11□□□□□ -1.27
DDX41-216ENST00000513562 Q6ZRU5 148 aa7.1□□□□□ -1.27
DDX41-216ENST00000513562 TOMM5Q8N4H5 51 aa7.1□□□□□ -1.27
DDX41-216ENST00000513562 DYNC2LI1Q8TCX1 351 aa7.1□□□□□ -1.27
DDX41-216ENST00000513562 GGTLC3B5MD39 225 aa7.09□□□□□ -1.27
DDX41-216ENST00000513562 IAH1Q2TAA2 248 aaPredicted RBP7.09□□□□□ -1.27
DDX41-216ENST00000513562 VWC2Q2TAL6 325 aa7.09□□□□□ -1.27
DDX41-216ENST00000513562 DEDD2Q8WXF8 326 aa7.09□□□□□ -1.27
DDX41-216ENST00000513562 RMI2Q96E14 147 aa7.09□□□□□ -1.27
DDX41-216ENST00000513562 PAXXQ9BUH6 204 aa7.09□□□□□ -1.27
DDX41-216ENST00000513562 SLC25A2Q9BXI2 301 aa7.09□□□□□ -1.27
DDX41-216ENST00000513562 GPN1Q9HCN4 374 aaPredicted RBP7.09□□□□□ -1.27
DDX41-216ENST00000513562 UQCC1Q9NVA1 299 aa7.09□□□□□ -1.27
DDX41-216ENST00000513562 NAGKQ9UJ70 344 aa7.09□□□□□ -1.27
DDX41-216ENST00000513562 RBAKDNA6NC62 111 aa7.08□□□□□ -1.28
DDX41-216ENST00000513562 A6NHS1 94 aa7.08□□□□□ -1.28
DDX41-216ENST00000513562 GNRH2O43555 120 aa7.08□□□□□ -1.28
DDX41-216ENST00000513562 CIDEAO60543 219 aa7.08□□□□□ -1.28
DDX41-216ENST00000513562 MBPP02686 304 aaPredicted RBP7.08□□□□□ -1.28
DDX41-216ENST00000513562 CHAC2Q8WUX2 184 aa7.08□□□□□ -1.28
DDX41-216ENST00000513562 C20orf85Q9H1P6 137 aa7.08□□□□□ -1.28
DDX41-216ENST00000513562 RPH3ALQ9UNE2 315 aa7.08□□□□□ -1.28
DDX41-216ENST00000513562 LENEPQ9Y5L5 61 aa7.08□□□□□ -1.28
DDX41-216ENST00000513562 TRAV8-1A0A0A6YYK1 113 aa7.07□□□□□ -1.28
DDX41-216ENST00000513562 UBE2L5PA0A1B0GUS4 154 aa7.07□□□□□ -1.28
DDX41-216ENST00000513562 CST7O76096 145 aa7.07□□□□□ -1.28
DDX41-216ENST00000513562 TYMSP04818 313 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms