RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 IFI27P40305 119 aaPredicted RBP10.27□□□□□ -0.77
PCDHA4-202ENST00000512229 VCX2Q9H322 139 aa10.27□□□□□ -0.77
PCDHA4-202ENST00000512229 COL6A3P12111 3177 aa10.26□□□□□ -0.77
PCDHA4-202ENST00000512229 SMIM27A0A1W2PRY6 76 aa10.26□□□□□ -0.77
PCDHA4-202ENST00000512229 GP9P14770 177 aa10.26□□□□□ -0.77
PCDHA4-202ENST00000512229 C18orf32Q8TCD1 76 aa10.26□□□□□ -0.77
PCDHA4-202ENST00000512229 RAB37Q96AX2 223 aa10.26□□□□□ -0.77
PCDHA4-202ENST00000512229 HCFC1P51610 2035 aa10.26□□□□□ -0.77
PCDHA4-202ENST00000512229 SMKR1H3BMG3 65 aa10.26□□□□□ -0.77
PCDHA4-202ENST00000512229 HLA-DMBP28068 263 aa10.26□□□□□ -0.77
PCDHA4-202ENST00000512229 RPL24P83731 157 aaKnown RBP10.26□□□□□ -0.77
PCDHA4-202ENST00000512229 TMEM95Q3KNT9 176 aa10.26□□□□□ -0.77
PCDHA4-202ENST00000512229 TMEM262E9PQX1 116 aa10.26□□□□□ -0.77
PCDHA4-202ENST00000512229 PLA2G5P39877 138 aa10.26□□□□□ -0.77
PCDHA4-202ENST00000512229 LAGE3Q14657 143 aa10.26□□□□□ -0.77
PCDHA4-202ENST00000512229 RNF114Q9Y508 228 aa10.26□□□□□ -0.77
PCDHA4-202ENST00000512229 ASPHD1Q5U4P2 390 aa10.26□□□□□ -0.77
PCDHA4-202ENST00000512229 PRSS46E5RG02 174 aa10.25□□□□□ -0.77
PCDHA4-202ENST00000512229 SPINK13Q1W4C9 94 aa10.25□□□□□ -0.77
PCDHA4-202ENST00000512229 SMPXQ9UHP9 88 aa10.25□□□□□ -0.77
PCDHA4-202ENST00000512229 DPM2O94777 84 aa10.25□□□□□ -0.77
PCDHA4-202ENST00000512229 LTAP01374 205 aa10.25□□□□□ -0.77
PCDHA4-202ENST00000512229 RPL13AP40429 203 aaKnown RBP10.25□□□□□ -0.77
PCDHA4-202ENST00000512229 ZNF415Q09FC8 603 aa10.25□□□□□ -0.77
PCDHA4-202ENST00000512229 SLAQ13239 276 aa10.25□□□□□ -0.77
PCDHA4-202ENST00000512229 CIRBPQ14011 172 aaKnown RBP10.25□□□□□ -0.77
PCDHA4-202ENST00000512229 TMEM101Q96IK0 257 aa10.25□□□□□ -0.77
PCDHA4-202ENST00000512229 UBE2E2Q96LR5 201 aa10.25□□□□□ -0.77
PCDHA4-202ENST00000512229 LINC01549A6NIU2 74 aa10.25□□□□□ -0.77
PCDHA4-202ENST00000512229 FAM104BQ5XKR9 115 aa10.25□□□□□ -0.77
PCDHA4-202ENST00000512229 C2orf88Q9BSF0 95 aa10.25□□□□□ -0.77
PCDHA4-202ENST00000512229 TRGV4A0A0C4DH28 118 aa10.24□□□□□ -0.77
PCDHA4-202ENST00000512229 GAGE10A6NGK3 116 aa10.24□□□□□ -0.77
PCDHA4-202ENST00000512229 LINC01559Q495D7 138 aa10.24□□□□□ -0.77
PCDHA4-202ENST00000512229 FANCD2OSQ96PS1 177 aa10.24□□□□□ -0.77
PCDHA4-202ENST00000512229 LAMTOR2Q9Y2Q5 125 aa10.24□□□□□ -0.77
PCDHA4-202ENST00000512229 PRRC2AP48634 2157 aaKnown RBP10.24□□□□□ -0.77
PCDHA4-202ENST00000512229 ZNF876PQ49A33 203 aa10.24□□□□□ -0.77
PCDHA4-202ENST00000512229 AGPAT4-IT1Q9H0P7 198 aa10.24□□□□□ -0.77
PCDHA4-202ENST00000512229 EXPH5Q8NEV8 1989 aa10.24□□□□□ -0.77
PCDHA4-202ENST00000512229 ZNF462Q96JM2 2506 aa10.23□□□□□ -0.77
PCDHA4-202ENST00000512229 LOC107984156A0A0G2JMH3 177 aa10.23□□□□□ -0.77
PCDHA4-202ENST00000512229 BUB3O43684 328 aa10.23□□□□□ -0.77
PCDHA4-202ENST00000512229 ARL17AQ8IVW1 177 aa10.23□□□□□ -0.77
PCDHA4-202ENST00000512229 CELSR3Q9NYQ7 3312 aa10.23□□□□□ -0.77
PCDHA4-202ENST00000512229 ODF3BA8MYP8 253 aa10.23□□□□□ -0.77
PCDHA4-202ENST00000512229 INSP01308 110 aa10.23□□□□□ -0.77
PCDHA4-202ENST00000512229 HTN3P15516 51 aa10.23□□□□□ -0.77
PCDHA4-202ENST00000512229 COTL1Q14019 142 aa10.23□□□□□ -0.77
PCDHA4-202ENST00000512229 C11orf71Q6IPW1 123 aa10.23□□□□□ -0.77
PCDHA4-202ENST00000512229 C1QTNF4Q9BXJ3 329 aa10.23□□□□□ -0.77
PCDHA4-202ENST00000512229 MS4A6AQ9H2W1 248 aa10.23□□□□□ -0.77
PCDHA4-202ENST00000512229 VCYO14598 125 aa10.23□□□□□ -0.77
PCDHA4-202ENST00000512229 FABP2P12104 132 aa10.23□□□□□ -0.77
PCDHA4-202ENST00000512229 OR2K2Q8NGT1 345 aa10.23□□□□□ -0.77
PCDHA4-202ENST00000512229 ATG2AQ2TAZ0 1938 aa10.23□□□□□ -0.77
PCDHA4-202ENST00000512229 RPL35AP18077 110 aaKnown RBP10.22□□□□□ -0.77
PCDHA4-202ENST00000512229 DYNAPQ8N1N2 210 aa10.22□□□□□ -0.77
PCDHA4-202ENST00000512229 PYGO2Q9BRQ0 406 aa10.22□□□□□ -0.77
PCDHA4-202ENST00000512229 A0A087WWL8 130 aa10.22□□□□□ -0.77
PCDHA4-202ENST00000512229 TRGV1A0A0A0MS02 117 aa10.22□□□□□ -0.77
PCDHA4-202ENST00000512229 TNFRSF6BO95407 300 aa10.22□□□□□ -0.77
PCDHA4-202ENST00000512229 CDSNQ15517 529 aa10.22□□□□□ -0.77
PCDHA4-202ENST00000512229 ALKBH7Q9BT30 221 aaPredicted RBP10.22□□□□□ -0.77
PCDHA4-202ENST00000512229 IGHV3-73A0A0B4J1V6 119 aa10.22□□□□□ -0.77
PCDHA4-202ENST00000512229 SYS1-DBNDD2H3BUS1 97 aa10.22□□□□□ -0.77
PCDHA4-202ENST00000512229 MEIG1Q5JSS6 88 aa10.22□□□□□ -0.77
PCDHA4-202ENST00000512229 H7C2G1 150 aa10.22□□□□□ -0.77
PCDHA4-202ENST00000512229 Q71RC1 249 aaPredicted RBP10.22□□□□□ -0.77
PCDHA4-202ENST00000512229 AJUBAQ96IF1 538 aa10.22□□□□□ -0.77
PCDHA4-202ENST00000512229 IGHG2P01859 326 aa10.21□□□□□ -0.77
PCDHA4-202ENST00000512229 CDKN1BP46527 198 aa10.21□□□□□ -0.77
PCDHA4-202ENST00000512229 A0A1B0GV90 55 aa10.21□□□□□ -0.78
PCDHA4-202ENST00000512229 HOXD3P31249 432 aaPredicted RBP10.21□□□□□ -0.78
PCDHA4-202ENST00000512229 TMEM158Q8WZ71 300 aa10.21□□□□□ -0.78
PCDHA4-202ENST00000512229 CFHR4Q92496 578 aa10.21□□□□□ -0.78
PCDHA4-202ENST00000512229 PKD1L2Q7Z442 2459 aa10.21□□□□□ -0.78
PCDHA4-202ENST00000512229 IGKV1D-37A0A075B6S9 117 aa10.21□□□□□ -0.78
PCDHA4-202ENST00000512229 IGKCP01834 107 aa10.21□□□□□ -0.78
PCDHA4-202ENST00000512229 COX6CP09669 75 aa10.21□□□□□ -0.78
PCDHA4-202ENST00000512229 ANXA2RQ3ZCQ2 193 aa10.21□□□□□ -0.78
PCDHA4-202ENST00000512229 DEFB104AQ8WTQ1 72 aa10.21□□□□□ -0.78
PCDHA4-202ENST00000512229 CSTL1Q9H114 145 aa10.21□□□□□ -0.78
PCDHA4-202ENST00000512229 XCL2Q9UBD3 114 aa10.21□□□□□ -0.78
PCDHA4-202ENST00000512229 TANC2Q9HCD6 1990 aa10.2□□□□□ -0.78
PCDHA4-202ENST00000512229 LGALS1P09382 135 aaKnown RBP10.2□□□□□ -0.78
PCDHA4-202ENST00000512229 NACAE9PAV3 2078 aa10.2□□□□□ -0.78
PCDHA4-202ENST00000512229 PRSS57Q6UWY2 283 aa10.2□□□□□ -0.78
PCDHA4-202ENST00000512229 WI2-2373I1.2A0A1W2PRP0 233 aa10.2□□□□□ -0.78
PCDHA4-202ENST00000512229 F6UB75 175 aa10.2□□□□□ -0.78
PCDHA4-202ENST00000512229 CHTOPQ9Y3Y2 248 aaKnown RBP10.2□□□□□ -0.78
PCDHA4-202ENST00000512229 H3BRM9 83 aa10.19□□□□□ -0.78
PCDHA4-202ENST00000512229 MRPL53Q96EL3 112 aaKnown RBP10.19□□□□□ -0.78
PCDHA4-202ENST00000512229 LENEPQ9Y5L5 61 aa10.19□□□□□ -0.78
PCDHA4-202ENST00000512229 TRAV12-2A0A075B6T6 113 aa10.19□□□□□ -0.78
PCDHA4-202ENST00000512229 EGR2P11161 476 aaPredicted RBP10.19□□□□□ -0.78
PCDHA4-202ENST00000512229 RPL36AP83881 106 aaKnown RBP10.19□□□□□ -0.78
PCDHA4-202ENST00000512229 FOXE3Q13461 319 aa10.19□□□□□ -0.78
PCDHA4-202ENST00000512229 MRPL51Q4U2R6 128 aaKnown RBP10.19□□□□□ -0.78
PCDHA4-202ENST00000512229 RPL36ALQ969Q0 106 aaKnown RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms