RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 MUC21Q5SSG8 566 aa11.55□□□□□ -0.56
DDX41-213ENST00000512027 GOLT1AQ6ZVE7 132 aa11.55□□□□□ -0.56
DDX41-213ENST00000512027 C15orf53Q8NAA6 179 aa11.55□□□□□ -0.56
DDX41-213ENST00000512027 LINC00467Q9BRT7 94 aa11.55□□□□□ -0.56
DDX41-213ENST00000512027 TMPRSS5Q9H3S3 457 aa11.55□□□□□ -0.56
DDX41-213ENST00000512027 IGHV1OR15-1A0A075B7D0 117 aa11.54□□□□□ -0.56
DDX41-213ENST00000512027 A0A0J9YY99 117 aa11.54□□□□□ -0.56
DDX41-213ENST00000512027 ARPC5O15511 151 aa11.54□□□□□ -0.56
DDX41-213ENST00000512027 GCHFRP30047 84 aa11.54□□□□□ -0.56
DDX41-213ENST00000512027 ANXA2RQ3ZCQ2 193 aa11.54□□□□□ -0.56
DDX41-213ENST00000512027 ZNF680Q8NEM1 530 aa11.54□□□□□ -0.56
DDX41-213ENST00000512027 CMTM2Q8TAZ6 248 aa11.54□□□□□ -0.56
DDX41-213ENST00000512027 RXFP4Q8TDU9 374 aa11.54□□□□□ -0.56
DDX41-213ENST00000512027 SGK494Q96LW2 274 aa11.54□□□□□ -0.56
DDX41-213ENST00000512027 TRGV1A0A0A0MS02 117 aa11.53□□□□□ -0.56
DDX41-213ENST00000512027 SERF2P84101 59 aa11.53□□□□□ -0.56
DDX41-213ENST00000512027 DAZ2Q13117 558 aaKnown RBP11.53□□□□□ -0.56
DDX41-213ENST00000512027 FAM74A1Q5RGS3 127 aa11.53□□□□□ -0.56
DDX41-213ENST00000512027 TRAV26-1A0A087WT03 109 aa11.52□□□□□ -0.57
DDX41-213ENST00000512027 BORCS7-ASMTA0A0B4J1R7 106 aa11.52□□□□□ -0.57
DDX41-213ENST00000512027 F6UZH7 168 aa11.52□□□□□ -0.57
DDX41-213ENST00000512027 TCL1AP56279 114 aa11.52□□□□□ -0.57
DDX41-213ENST00000512027 ZNF726P1Q15940 193 aa11.52□□□□□ -0.57
DDX41-213ENST00000512027 TVP23CQ96ET8 276 aa11.52□□□□□ -0.57
DDX41-213ENST00000512027 MRPL16Q9NX20 251 aaKnown RBP11.52□□□□□ -0.57
DDX41-213ENST00000512027 TRBV7-9A0A0J9YWB2 115 aa11.51□□□□□ -0.57
DDX41-213ENST00000512027 MBP02144 154 aa11.51□□□□□ -0.57
DDX41-213ENST00000512027 RNF212Q495C1 297 aa11.51□□□□□ -0.57
DDX41-213ENST00000512027 IQCF2Q8IXL9 164 aa11.51□□□□□ -0.57
DDX41-213ENST00000512027 GNPNAT1Q96EK6 184 aaPredicted RBP11.51□□□□□ -0.57
DDX41-213ENST00000512027 ARPC5LQ9BPX5 153 aa11.51□□□□□ -0.57
DDX41-213ENST00000512027 ATG101Q9BSB4 218 aa11.51□□□□□ -0.57
DDX41-213ENST00000512027 ACTR3CQ9C0K3 210 aaPredicted RBP11.51□□□□□ -0.57
DDX41-213ENST00000512027 CYTL1Q9NRR1 136 aa11.51□□□□□ -0.57
DDX41-213ENST00000512027 TRGV2A0A075B6R0 118 aa11.5□□□□□ -0.57
DDX41-213ENST00000512027 GGTLC3B5MD39 225 aa11.5□□□□□ -0.57
DDX41-213ENST00000512027 SPINK4O60575 86 aa11.5□□□□□ -0.57
DDX41-213ENST00000512027 Q6AWC8 147 aa11.5□□□□□ -0.57
DDX41-213ENST00000512027 SUN5Q8TC36 379 aa11.5□□□□□ -0.57
DDX41-213ENST00000512027 ST6GAL2Q96JF0 529 aa11.5□□□□□ -0.57
DDX41-213ENST00000512027 MDFICQ9P1T7 246 aa11.5□□□□□ -0.57
DDX41-213ENST00000512027 NAGKQ9UJ70 344 aa11.5□□□□□ -0.57
DDX41-213ENST00000512027 CXorf1O96002 111 aa11.49□□□□□ -0.57
DDX41-213ENST00000512027 IGHV3-53P01767 116 aa11.49□□□□□ -0.57
DDX41-213ENST00000512027 TMEM183BQ1AE95 376 aa11.49□□□□□ -0.57
DDX41-213ENST00000512027 IBA57Q5T440 356 aaKnown RBP11.49□□□□□ -0.57
DDX41-213ENST00000512027 TMEM183AQ8IXX5 376 aa11.49□□□□□ -0.57
DDX41-213ENST00000512027 TMED6Q8WW62 240 aa11.49□□□□□ -0.57
DDX41-213ENST00000512027 LENEPQ9Y5L5 61 aa11.49□□□□□ -0.57
DDX41-213ENST00000512027 MUC4Q99102 2169 aa11.49□□□□□ -0.57
DDX41-213ENST00000512027 TCRAP04437 139 aa11.48□□□□□ -0.57
DDX41-213ENST00000512027 FGF8P55075 233 aaPredicted RBP11.48□□□□□ -0.57
DDX41-213ENST00000512027 SUMO1P63165 101 aaKnown RBP11.48□□□□□ -0.57
DDX41-213ENST00000512027 ZNF415Q09FC8 603 aa11.48□□□□□ -0.57
DDX41-213ENST00000512027 C5orf17Q8NAS9 161 aa11.48□□□□□ -0.57
DDX41-213ENST00000512027 OR11H4Q8NGC9 324 aa11.48□□□□□ -0.57
DDX41-213ENST00000512027 C8orf49Q96NF6 230 aa11.48□□□□□ -0.57
DDX41-213ENST00000512027 LINC00588Q9Y4M8 146 aa11.48□□□□□ -0.57
DDX41-213ENST00000512027 PKD1P98161 4303 aa11.48□□□□□ -0.57
DDX41-213ENST00000512027 CTXND1A0A1B0GTU2 59 aa11.47□□□□□ -0.57
DDX41-213ENST00000512027 RTL8CO15255 209 aa11.47□□□□□ -0.57
DDX41-213ENST00000512027 LGALS9BQ3B8N2 356 aa11.47□□□□□ -0.57
DDX41-213ENST00000512027 Q6ZR54 194 aa11.47□□□□□ -0.57
DDX41-213ENST00000512027 ARL6IP6Q8N6S5 226 aa11.47□□□□□ -0.57
DDX41-213ENST00000512027 TREM1Q9NP99 234 aa11.47□□□□□ -0.57
DDX41-213ENST00000512027 TMEM167BQ9NRX6 74 aa11.47□□□□□ -0.57
DDX41-213ENST00000512027 GNRH2O43555 120 aa11.46□□□□□ -0.57
DDX41-213ENST00000512027 UBE2G2P60604 165 aa11.46□□□□□ -0.57
DDX41-213ENST00000512027 AKR1C8PQ5T2L2 129 aa11.46□□□□□ -0.57
DDX41-213ENST00000512027 FAM159AQ6UWV7 190 aa11.46□□□□□ -0.57
DDX41-213ENST00000512027 ZNRF2Q8NHG8 242 aa11.46□□□□□ -0.57
DDX41-213ENST00000512027 VSIG2Q96IQ7 327 aa11.46□□□□□ -0.57
DDX41-213ENST00000512027 TAAR5O14804 337 aa11.45□□□□□ -0.58
DDX41-213ENST00000512027 IGLV2-11P01706 119 aa11.45□□□□□ -0.58
DDX41-213ENST00000512027 ZNF80P51504 273 aaPredicted RBP11.45□□□□□ -0.58
DDX41-213ENST00000512027 C18orf15Q96N68 181 aa11.45□□□□□ -0.58
DDX41-213ENST00000512027 EPDR1Q9UM22 224 aa11.45□□□□□ -0.58
DDX41-213ENST00000512027 PSG8Q9UQ74 426 aa11.45□□□□□ -0.58
DDX41-213ENST00000512027 TRAV21A0A0B4J279 112 aa11.44□□□□□ -0.58
DDX41-213ENST00000512027 SFTA3P0C7M3 94 aa11.44□□□□□ -0.58
DDX41-213ENST00000512027 FHITP49789 147 aa11.44□□□□□ -0.58
DDX41-213ENST00000512027 CCL18P55774 89 aa11.44□□□□□ -0.58
DDX41-213ENST00000512027 PRNTQ86SH4 94 aa11.44□□□□□ -0.58
DDX41-213ENST00000512027 KCNRGQ8N5I3 272 aa11.44□□□□□ -0.58
DDX41-213ENST00000512027 LINC00479Q96M42 142 aa11.44□□□□□ -0.58
DDX41-213ENST00000512027 C11orf21Q9P2W6 132 aa11.44□□□□□ -0.58
DDX41-213ENST00000512027 TRGV11A0A075B6L2 103 aa11.43□□□□□ -0.58
DDX41-213ENST00000512027 TRAV34A0A0B4J273 112 aa11.43□□□□□ -0.58
DDX41-213ENST00000512027 MAP1LC3B2A6NCE7 125 aa11.43□□□□□ -0.58
DDX41-213ENST00000512027 TYMSP04818 313 aa11.43□□□□□ -0.58
DDX41-213ENST00000512027 FLI1Q01543 452 aaPredicted RBP11.43□□□□□ -0.58
DDX41-213ENST00000512027 CYB561D1Q8N8Q1 229 aa11.43□□□□□ -0.58
DDX41-213ENST00000512027 TMEM75Q8N9X5 138 aa11.43□□□□□ -0.58
DDX41-213ENST00000512027 MAP1LC3BQ9GZQ8 125 aa11.43□□□□□ -0.58
DDX41-213ENST00000512027 A0A096LPF7 62 aa11.42□□□□□ -0.58
DDX41-213ENST00000512027 IGHV3-16A0A0C4DH30 117 aa11.42□□□□□ -0.58
DDX41-213ENST00000512027 SERTM2A0A1B0GWG4 89 aa11.42□□□□□ -0.58
DDX41-213ENST00000512027 A0A1W2PRE2 83 aa11.42□□□□□ -0.58
DDX41-213ENST00000512027 GCGP01275 180 aa11.42□□□□□ -0.58
DDX41-213ENST00000512027 FAM3BP58499 235 aaPredicted RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms