RNA–Protein interactions for RNA: ENST00000511105.1

PTPN13-208, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 3

Gene PTPN13, Length 645 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-208ENST00000511105 OR4E1P0C645 316 aa3.31□□□□□ -1.88
PTPN13-208ENST00000511105 METTL15P1P0C7V9 234 aa3.31□□□□□ -1.88
PTPN13-208ENST00000511105 IL7P13232 177 aa3.31□□□□□ -1.88
PTPN13-208ENST00000511105 PMCHP20382 165 aa3.31□□□□□ -1.88
PTPN13-208ENST00000511105 CRYBB3P26998 211 aa3.31□□□□□ -1.88
PTPN13-208ENST00000511105 BTCP35070 178 aa3.31□□□□□ -1.88
PTPN13-208ENST00000511105 FAUP35544 74 aaKnown RBP3.31□□□□□ -1.88
PTPN13-208ENST00000511105 APOC4P55056 127 aa3.31□□□□□ -1.88
PTPN13-208ENST00000511105 VAMP3Q15836 100 aa3.31□□□□□ -1.88
PTPN13-208ENST00000511105 TMEM128Q5BJH2 165 aa3.31□□□□□ -1.88
PTPN13-208ENST00000511105 LINC00336Q6ZUF6 198 aa3.31□□□□□ -1.88
PTPN13-208ENST00000511105 RPP25LQ8N5L8 163 aaKnown RBP3.31□□□□□ -1.88
PTPN13-208ENST00000511105 RNF182Q8N6D2 247 aa3.31□□□□□ -1.88
PTPN13-208ENST00000511105 RASL10AQ92737 203 aa3.31□□□□□ -1.88
PTPN13-208ENST00000511105 RSG1Q9BU20 258 aa3.31□□□□□ -1.88
PTPN13-208ENST00000511105 RCL1Q9Y2P8 373 aaKnown RBP3.31□□□□□ -1.88
PTPN13-208ENST00000511105 U3KQ87 197 aa3.31□□□□□ -1.88
PTPN13-208ENST00000511105 TRAV5A0A0B4J249 113 aa3.3□□□□□ -1.88
PTPN13-208ENST00000511105 KRTAP16-1A8MUX0 517 aa3.3□□□□□ -1.88
PTPN13-208ENST00000511105 SNRPGP15A8MWD9 76 aa3.3□□□□□ -1.88
PTPN13-208ENST00000511105 IGLL5B9A064 214 aa3.3□□□□□ -1.88
PTPN13-208ENST00000511105 INS-IGF2F8WCM5 200 aa3.3□□□□□ -1.88
PTPN13-208ENST00000511105 CORTO00230 105 aa3.3□□□□□ -1.88
PTPN13-208ENST00000511105 HSBP1O75506 76 aa3.3□□□□□ -1.88
PTPN13-208ENST00000511105 SERF1AO75920 110 aa3.3□□□□□ -1.88
PTPN13-208ENST00000511105 NDUFB6O95139 128 aa3.3□□□□□ -1.88
PTPN13-208ENST00000511105 SNAPINO95295 136 aa3.3□□□□□ -1.88
PTPN13-208ENST00000511105 SLC25A4P12235 298 aa3.3□□□□□ -1.88
PTPN13-208ENST00000511105 AP3S2P59780 193 aa3.3□□□□□ -1.88
PTPN13-208ENST00000511105 YPEL3P61236 119 aaPredicted RBP3.3□□□□□ -1.88
PTPN13-208ENST00000511105 AKR1C1Q04828 323 aa3.3□□□□□ -1.88
PTPN13-208ENST00000511105 RBMY1FQ15415 496 aaKnown RBP3.3□□□□□ -1.88
PTPN13-208ENST00000511105 FCN2Q15485 313 aa3.3□□□□□ -1.88
PTPN13-208ENST00000511105 ZNF726P1Q15940 193 aa3.3□□□□□ -1.88
PTPN13-208ENST00000511105 Q1RN00 199 aa3.3□□□□□ -1.88
PTPN13-208ENST00000511105 IAH1Q2TAA2 248 aaPredicted RBP3.3□□□□□ -1.88
PTPN13-208ENST00000511105 OR8I2Q8N0Y5 310 aa3.3□□□□□ -1.88
PTPN13-208ENST00000511105 RNASEH2CQ8TDP1 164 aaKnown RBP3.3□□□□□ -1.88
PTPN13-208ENST00000511105 DCANP1Q8TF63 244 aa3.3□□□□□ -1.88
PTPN13-208ENST00000511105 IL22RA2Q969J5 263 aa3.3□□□□□ -1.88
PTPN13-208ENST00000511105 NARS2Q96I59 477 aaKnown RBP3.3□□□□□ -1.88
PTPN13-208ENST00000511105 VGLL1Q99990 258 aa3.3□□□□□ -1.88
PTPN13-208ENST00000511105 PARD6GQ9BYG4 376 aaPredicted RBP3.3□□□□□ -1.88
PTPN13-208ENST00000511105 SLC35B3Q9H1N7 401 aa3.3□□□□□ -1.88
PTPN13-208ENST00000511105 CELA1Q9UNI1 258 aa3.3□□□□□ -1.88
PTPN13-208ENST00000511105 GOLT1BQ9Y3E0 138 aa3.3□□□□□ -1.88
PTPN13-208ENST00000511105 DNAH1Q9P2D7 4330 aa3.29□□□□□ -1.88
PTPN13-208ENST00000511105 KIR2DL5BA0A0G2JN68 375 aa3.29□□□□□ -1.88
PTPN13-208ENST00000511105 KIR2DL5BA0A0G2JPC4 375 aa3.29□□□□□ -1.88
PTPN13-208ENST00000511105 CENPXA8MT69 81 aa3.29□□□□□ -1.88
PTPN13-208ENST00000511105 ZNF705FA8MVS1 300 aaPredicted RBP3.29□□□□□ -1.88
PTPN13-208ENST00000511105 LYRM1O43325 122 aa3.29□□□□□ -1.88
PTPN13-208ENST00000511105 CST7O76096 145 aa3.29□□□□□ -1.88
PTPN13-208ENST00000511105 IFNA21P01568 189 aa3.29□□□□□ -1.88
PTPN13-208ENST00000511105 TCRBP04435 133 aa3.29□□□□□ -1.88
PTPN13-208ENST00000511105 IL5P05113 134 aa3.29□□□□□ -1.88
PTPN13-208ENST00000511105 OR5G3P0C626 314 aa3.29□□□□□ -1.88
PTPN13-208ENST00000511105 HTN1P15515 57 aa3.29□□□□□ -1.88
PTPN13-208ENST00000511105 HTN3P15516 51 aa3.29□□□□□ -1.88
PTPN13-208ENST00000511105 GPX4P36969 197 aaPredicted RBP3.29□□□□□ -1.88
PTPN13-208ENST00000511105 EIF2B2P49770 351 aaKnown RBP3.29□□□□□ -1.88
PTPN13-208ENST00000511105 CMC4P56277 68 aaPredicted RBP3.29□□□□□ -1.88
PTPN13-208ENST00000511105 S100A10P60903 97 aa3.29□□□□□ -1.88
PTPN13-208ENST00000511105 IFITM3Q01628 133 aa3.29□□□□□ -1.88
PTPN13-208ENST00000511105 FAM78BQ5VT40 261 aa3.29□□□□□ -1.88
PTPN13-208ENST00000511105 CEMP1Q6PRD7 247 aaPredicted RBP3.29□□□□□ -1.88
PTPN13-208ENST00000511105 PATE2Q6UY27 113 aa3.29□□□□□ -1.88
PTPN13-208ENST00000511105 KIR2DL5AQ8N109 375 aa3.29□□□□□ -1.88
PTPN13-208ENST00000511105 KIR2DL5BQ8NHK3 375 aa3.29□□□□□ -1.88
PTPN13-208ENST00000511105 COQ8AQ8NI60 647 aa3.29□□□□□ -1.88
PTPN13-208ENST00000511105 SLC25A21Q9BQT8 299 aaPredicted RBP3.29□□□□□ -1.88
PTPN13-208ENST00000511105 TRAV12-2A0A075B6T6 113 aa3.28□□□□□ -1.88
PTPN13-208ENST00000511105 TRAV8-2A0A0B4J237 113 aa3.28□□□□□ -1.88
PTPN13-208ENST00000511105 C7orf66A4D0T2 115 aa3.28□□□□□ -1.88
PTPN13-208ENST00000511105 NAP1L6A6NFF2 107 aa3.28□□□□□ -1.88
PTPN13-208ENST00000511105 ZNF98A6NK75 572 aa3.28□□□□□ -1.88
PTPN13-208ENST00000511105 H3BMM0 161 aa3.28□□□□□ -1.88
PTPN13-208ENST00000511105 M0R2N4 97 aa3.28□□□□□ -1.88
PTPN13-208ENST00000511105 MED6O75586 246 aa3.28□□□□□ -1.88
PTPN13-208ENST00000511105 OXTP01178 125 aa3.28□□□□□ -1.88
PTPN13-208ENST00000511105 MEOX2P50222 304 aa3.28□□□□□ -1.88
PTPN13-208ENST00000511105 SLC38A11Q08AI6 406 aa3.28□□□□□ -1.88
PTPN13-208ENST00000511105 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.28□□□□□ -1.88
PTPN13-208ENST00000511105 CYP2G1PQ6ZSU1 146 aa3.28□□□□□ -1.88
PTPN13-208ENST00000511105 CBLN2Q8IUK8 224 aa3.28□□□□□ -1.88
PTPN13-208ENST00000511105 C12orf45Q8N5I9 185 aaPredicted RBP3.28□□□□□ -1.88
PTPN13-208ENST00000511105 TMEM252Q8N6L7 170 aa3.28□□□□□ -1.88
PTPN13-208ENST00000511105 HSD17B11Q8NBQ5 300 aa3.28□□□□□ -1.88
PTPN13-208ENST00000511105 LRRC20Q8TCA0 184 aa3.28□□□□□ -1.88
PTPN13-208ENST00000511105 ISOC2Q96AB3 205 aa3.28□□□□□ -1.88
PTPN13-208ENST00000511105 C7orf50Q9BRJ6 194 aaKnown RBP3.28□□□□□ -1.88
PTPN13-208ENST00000511105 SLC25A39Q9BZJ4 359 aaPredicted RBP3.28□□□□□ -1.88
PTPN13-208ENST00000511105 ARL6Q9H0F7 186 aa3.28□□□□□ -1.88
PTPN13-208ENST00000511105 RFNGQ9Y644 331 aa3.28□□□□□ -1.88
PTPN13-208ENST00000511105 KMT2AQ03164 3969 aa3.27□□□□□ -1.89
PTPN13-208ENST00000511105 A6NDN8 102 aa3.27□□□□□ -1.89
PTPN13-208ENST00000511105 ZNF705GA8MUZ8 300 aaPredicted RBP3.27□□□□□ -1.89
PTPN13-208ENST00000511105 K7EPK0 472 aa3.27□□□□□ -1.89
PTPN13-208ENST00000511105 M0R2Z0 102 aa3.27□□□□□ -1.89
PTPN13-208ENST00000511105 AZU1P20160 251 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms