RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 SND1-IT1Q9HBX3 110 aa2.36□□□□□ -2.03
NUP54-209ENST00000510569 IL36BQ9NZH7 164 aa2.36□□□□□ -2.03
NUP54-209ENST00000510569 ZNF443Q9Y2A4 671 aaPredicted RBP2.36□□□□□ -2.03
NUP54-209ENST00000510569 LSM2Q9Y333 95 aaKnown RBP2.36□□□□□ -2.03
NUP54-209ENST00000510569 CUL9Q8IWT3 2517 aa2.36□□□□□ -2.03
NUP54-209ENST00000510569 BDP1A6H8Y1 2624 aa2.36□□□□□ -2.03
NUP54-209ENST00000510569 CDH23Q9H251 3354 aa2.35□□□□□ -2.03
NUP54-209ENST00000510569 MYOFQ9NZM1 2061 aa2.35□□□□□ -2.03
NUP54-209ENST00000510569 A0A0C4DFX4 3053 aa2.35□□□□□ -2.03
NUP54-209ENST00000510569 IGHV1OR15-9A0A0B4J2B8 117 aa2.35□□□□□ -2.03
NUP54-209ENST00000510569 RPL36A-HNRNPH2H7BZ11 118 aa2.35□□□□□ -2.03
NUP54-209ENST00000510569 CCL22O00626 93 aa2.35□□□□□ -2.03
NUP54-209ENST00000510569 OR1I1O60431 355 aa2.35□□□□□ -2.03
NUP54-209ENST00000510569 TCRAP04437 139 aa2.35□□□□□ -2.03
NUP54-209ENST00000510569 PRM2P04554 102 aa2.35□□□□□ -2.03
NUP54-209ENST00000510569 INAFM2P0DMQ5 153 aa2.35□□□□□ -2.03
NUP54-209ENST00000510569 PYYP10082 97 aa2.35□□□□□ -2.03
NUP54-209ENST00000510569 PIPP12273 146 aaPredicted RBP2.35□□□□□ -2.03
NUP54-209ENST00000510569 IFITM1P13164 125 aa2.35□□□□□ -2.03
NUP54-209ENST00000510569 HMGA1P17096 107 aaKnown RBP2.35□□□□□ -2.03
NUP54-209ENST00000510569 SRP14P37108 136 aaKnown RBP2.35□□□□□ -2.03
NUP54-209ENST00000510569 NMUP48645 174 aa2.35□□□□□ -2.03
NUP54-209ENST00000510569 HBBP68871 147 aa2.35□□□□□ -2.03
NUP54-209ENST00000510569 KLRD1Q13241 179 aa2.35□□□□□ -2.03
NUP54-209ENST00000510569 TMEM155Q4W5P6 130 aa2.35□□□□□ -2.03
NUP54-209ENST00000510569 KRTAP13-2Q52LG2 175 aa2.35□□□□□ -2.03
NUP54-209ENST00000510569 LINC01554Q52M75 96 aa2.35□□□□□ -2.03
NUP54-209ENST00000510569 CAMK2N1Q7Z7J9 78 aa2.35□□□□□ -2.03
NUP54-209ENST00000510569 TMEM183AQ8IXX5 376 aa2.35□□□□□ -2.03
NUP54-209ENST00000510569 LINC00311Q8N616 119 aa2.35□□□□□ -2.03
NUP54-209ENST00000510569 DEFB123Q8N688 67 aa2.35□□□□□ -2.03
NUP54-209ENST00000510569 BPIFB6Q8NFQ5 453 aa2.35□□□□□ -2.03
NUP54-209ENST00000510569 OR10P1Q8NGE3 313 aa2.35□□□□□ -2.03
NUP54-209ENST00000510569 OR4A5Q8NH83 315 aa2.35□□□□□ -2.03
NUP54-209ENST00000510569 C2orf15Q8WU43 125 aaKnown RBP2.35□□□□□ -2.03
NUP54-209ENST00000510569 RNASE6Q93091 150 aaKnown RBP2.35□□□□□ -2.03
NUP54-209ENST00000510569 DPH3Q96FX2 82 aa2.35□□□□□ -2.03
NUP54-209ENST00000510569 ZC2HC1AQ96GY0 325 aa2.35□□□□□ -2.03
NUP54-209ENST00000510569 YPEL2Q96QA6 119 aa2.35□□□□□ -2.03
NUP54-209ENST00000510569 CHAC1Q9BUX1 264 aa2.35□□□□□ -2.03
NUP54-209ENST00000510569 DPY30Q9C005 99 aa2.35□□□□□ -2.03
NUP54-209ENST00000510569 FGF23Q9GZV9 251 aaPredicted RBP2.35□□□□□ -2.03
NUP54-209ENST00000510569 PRO1933Q9H354 126 aa2.35□□□□□ -2.03
NUP54-209ENST00000510569 ZNF586Q9NXT0 402 aa2.35□□□□□ -2.03
NUP54-209ENST00000510569 COMMD3Q9UBI1 195 aa2.35□□□□□ -2.03
NUP54-209ENST00000510569 SNRNP200O75643 2136 aaKnown RBP2.35□□□□□ -2.03
NUP54-209ENST00000510569 EML5Q05BV3 1969 aa2.34□□□□□ -2.03
NUP54-209ENST00000510569 TRAV12-2A0A075B6T6 113 aa2.34□□□□□ -2.03
NUP54-209ENST00000510569 IGKV1-9A0A0C4DH69 117 aa2.34□□□□□ -2.03
NUP54-209ENST00000510569 A0A1W2PRS3 328 aa2.34□□□□□ -2.03
NUP54-209ENST00000510569 A8MWL6 223 aa2.34□□□□□ -2.03
NUP54-209ENST00000510569 G3V3Q6 166 aa2.34□□□□□ -2.03
NUP54-209ENST00000510569 GEMIN2O14893 280 aaKnown RBP2.34□□□□□ -2.03
NUP54-209ENST00000510569 UQCRQO14949 82 aa2.34□□□□□ -2.03
NUP54-209ENST00000510569 SOCS1O15524 211 aa2.34□□□□□ -2.03
NUP54-209ENST00000510569 HIST1H2BKO60814 126 aa2.34□□□□□ -2.03
NUP54-209ENST00000510569 KLF7O75840 302 aaPredicted RBP2.34□□□□□ -2.03
NUP54-209ENST00000510569 CD2P06729 351 aa2.34□□□□□ -2.03
NUP54-209ENST00000510569 HIST1H2BJP06899 126 aa2.34□□□□□ -2.03
NUP54-209ENST00000510569 CXCL1P09341 107 aa2.34□□□□□ -2.03
NUP54-209ENST00000510569 OR5AC1P0C628 307 aa2.34□□□□□ -2.03
NUP54-209ENST00000510569 HLA-DRB4P13762 266 aa2.34□□□□□ -2.03
NUP54-209ENST00000510569 ZNF14P17017 642 aaPredicted RBP2.34□□□□□ -2.03
NUP54-209ENST00000510569 DYNLT3P51808 116 aa2.34□□□□□ -2.03
NUP54-209ENST00000510569 SNRPGP62308 76 aaKnown RBP2.34□□□□□ -2.03
NUP54-209ENST00000510569 EIF5AP63241 154 aaKnown RBP2.34□□□□□ -2.03
NUP54-209ENST00000510569 ZNF90Q03938 601 aa2.34□□□□□ -2.03
NUP54-209ENST00000510569 BSPH1Q075Z2 132 aa2.34□□□□□ -2.03
NUP54-209ENST00000510569 LINC01545Q5VT33 79 aa2.34□□□□□ -2.03
NUP54-209ENST00000510569 MRPL54Q6P161 138 aaKnown RBP2.34□□□□□ -2.03
NUP54-209ENST00000510569 TEN1Q86WV5 123 aa2.34□□□□□ -2.03
NUP54-209ENST00000510569 KCNRGQ8N5I3 272 aa2.34□□□□□ -2.03
NUP54-209ENST00000510569 MORN4Q8NDC4 146 aa2.34□□□□□ -2.03
NUP54-209ENST00000510569 OR10G2Q8NGC3 310 aa2.34□□□□□ -2.03
NUP54-209ENST00000510569 OR8D4Q8NGM9 314 aa2.34□□□□□ -2.03
NUP54-209ENST00000510569 MAL2Q969L2 176 aa2.34□□□□□ -2.03
NUP54-209ENST00000510569 B9D2Q9BPU9 175 aa2.34□□□□□ -2.03
NUP54-209ENST00000510569 C16orf95Q9H693 158 aa2.34□□□□□ -2.03
NUP54-209ENST00000510569 XAGE1AQ9HD64 81 aa2.34□□□□□ -2.03
NUP54-209ENST00000510569 FAM60AQ9NP50 221 aa2.34□□□□□ -2.03
NUP54-209ENST00000510569 CHCHD2Q9Y6H1 151 aaPredicted RBP2.34□□□□□ -2.03
NUP54-209ENST00000510569 V9GYH0 126 aa2.34□□□□□ -2.03
NUP54-209ENST00000510569 HLA-DRB4X5D2U9 266 aa2.34□□□□□ -2.03
NUP54-209ENST00000510569 LOC730098B7Z3J9 87 aa2.33□□□□□ -2.04
NUP54-209ENST00000510569 RER1O15258 196 aa2.33□□□□□ -2.04
NUP54-209ENST00000510569 SLC25A14O95258 325 aaPredicted RBP2.33□□□□□ -2.04
NUP54-209ENST00000510569 MT-ND6P03923 174 aa2.33□□□□□ -2.04
NUP54-209ENST00000510569 ZNF688P0C7X2 276 aa2.33□□□□□ -2.04
NUP54-209ENST00000510569 PIRTP0C851 137 aa2.33□□□□□ -2.04
NUP54-209ENST00000510569 CRYBB3P26998 211 aa2.33□□□□□ -2.04
NUP54-209ENST00000510569 CD52P31358 61 aa2.33□□□□□ -2.04
NUP54-209ENST00000510569 RNASE4P34096 147 aaKnown RBP2.33□□□□□ -2.04
NUP54-209ENST00000510569 CSN1S1P47710 185 aa2.33□□□□□ -2.04
NUP54-209ENST00000510569 HIST1H4AP62805 103 aaKnown RBP2.33□□□□□ -2.04
NUP54-209ENST00000510569 RPL38P63173 70 aaKnown RBP2.33□□□□□ -2.04
NUP54-209ENST00000510569 DCDP81605 110 aaKnown RBP2.33□□□□□ -2.04
NUP54-209ENST00000510569 DEFB116Q30KQ4 102 aa2.33□□□□□ -2.04
NUP54-209ENST00000510569 LGALS9BQ3B8N2 356 aa2.33□□□□□ -2.04
NUP54-209ENST00000510569 C12orf73Q69YU5 71 aa2.33□□□□□ -2.04
NUP54-209ENST00000510569 Q6AWC8 147 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms