RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 PPP1R14DQ9NXH3 145 aa13.74□□□□□ -0.21
CCHCR1-228ENST00000509552 SVEP1Q4LDE5 3571 aa13.74□□□□□ -0.21
CCHCR1-228ENST00000509552 AKAP6Q13023 2319 aa13.74□□□□□ -0.21
CCHCR1-228ENST00000509552 LINC01546A6NGU7 62 aa13.74□□□□□ -0.21
CCHCR1-228ENST00000509552 ANKRD39Q53RE8 183 aa13.74□□□□□ -0.21
CCHCR1-228ENST00000509552 C9orf139Q6ZV77 190 aa13.74□□□□□ -0.21
CCHCR1-228ENST00000509552 MEGF9Q9H1U4 602 aa13.74□□□□□ -0.21
CCHCR1-228ENST00000509552 TAX1BP3O14907 124 aa13.73□□□□□ -0.21
CCHCR1-228ENST00000509552 SNAI2O43623 268 aa13.73□□□□□ -0.21
CCHCR1-228ENST00000509552 EVI2AP22794 236 aa13.73□□□□□ -0.21
CCHCR1-228ENST00000509552 FCER1GP30273 86 aa13.73□□□□□ -0.21
CCHCR1-228ENST00000509552 LEPP41159 167 aa13.73□□□□□ -0.21
CCHCR1-228ENST00000509552 VAMP3Q15836 100 aa13.73□□□□□ -0.21
CCHCR1-228ENST00000509552 C2orf91Q6ZV80 131 aa13.73□□□□□ -0.21
CCHCR1-228ENST00000509552 GLMPQ8WWB7 406 aa13.73□□□□□ -0.21
CCHCR1-228ENST00000509552 NCOR2Q9Y618 2525 aa13.72□□□□□ -0.21
CCHCR1-228ENST00000509552 CHD8Q9HCK8 2581 aa13.72□□□□□ -0.21
CCHCR1-228ENST00000509552 IGHV4-61A0A0C4DH41 118 aa13.72□□□□□ -0.21
CCHCR1-228ENST00000509552 GAS8-AS1O95177 125 aa13.72□□□□□ -0.21
CCHCR1-228ENST00000509552 NDUFA4O00483 81 aa13.71□□□□□ -0.21
CCHCR1-228ENST00000509552 CD5LO43866 347 aa13.71□□□□□ -0.21
CCHCR1-228ENST00000509552 IGF1P05019 195 aa13.71□□□□□ -0.21
CCHCR1-228ENST00000509552 C18orf15Q96N68 181 aa13.71□□□□□ -0.21
CCHCR1-228ENST00000509552 CCL19Q99731 98 aa13.71□□□□□ -0.21
CCHCR1-228ENST00000509552 LENEPQ9Y5L5 61 aa13.71□□□□□ -0.21
CCHCR1-228ENST00000509552 IGHV7-4-1A0A0J9YVY3 117 aa13.7□□□□□ -0.22
CCHCR1-228ENST00000509552 FOXE3Q13461 319 aa13.7□□□□□ -0.22
CCHCR1-228ENST00000509552 SPANXN1Q5VSR9 72 aa13.7□□□□□ -0.22
CCHCR1-228ENST00000509552 WFDC3Q8IUB2 231 aa13.7□□□□□ -0.22
CCHCR1-228ENST00000509552 FGF6P10767 208 aa13.7□□□□□ -0.22
CCHCR1-228ENST00000509552 Q8N8P6 123 aa13.7□□□□□ -0.22
CCHCR1-228ENST00000509552 OR2K2Q8NGT1 345 aa13.7□□□□□ -0.22
CCHCR1-228ENST00000509552 GATA1P15976 413 aaPredicted RBP13.69□□□□□ -0.22
CCHCR1-228ENST00000509552 LY6EQ16553 131 aa13.69□□□□□ -0.22
CCHCR1-228ENST00000509552 TMEM97Q5BJF2 176 aa13.69□□□□□ -0.22
CCHCR1-228ENST00000509552 BOD1L2Q8IYS8 172 aa13.69□□□□□ -0.22
CCHCR1-228ENST00000509552 USMG5Q96IX5 58 aa13.69□□□□□ -0.22
CCHCR1-228ENST00000509552 UFC1Q9Y3C8 167 aa13.69□□□□□ -0.22
CCHCR1-228ENST00000509552 H3BUA1 57 aa13.69□□□□□ -0.22
CCHCR1-228ENST00000509552 NDUFS8O00217 210 aa13.69□□□□□ -0.22
CCHCR1-228ENST00000509552 OR4C5Q8NGB2 326 aa13.69□□□□□ -0.22
CCHCR1-228ENST00000509552 C10orf105Q8TEF2 133 aa13.69□□□□□ -0.22
CCHCR1-228ENST00000509552 LINC00477Q96M19 166 aa13.69□□□□□ -0.22
CCHCR1-228ENST00000509552 SMAD7O15105 426 aaKnown RBP13.68□□□□□ -0.22
CCHCR1-228ENST00000509552 CLEC2AQ6UVW9 174 aa13.68□□□□□ -0.22
CCHCR1-228ENST00000509552 UNQ9165/PRO28630Q6UXU0 137 aa13.68□□□□□ -0.22
CCHCR1-228ENST00000509552 OR9G4Q8NGQ1 327 aa13.68□□□□□ -0.22
CCHCR1-228ENST00000509552 OR10J6PQ8NGY7 276 aa13.68□□□□□ -0.22
CCHCR1-228ENST00000509552 DKK2Q9UBU2 259 aa13.68□□□□□ -0.22
CCHCR1-228ENST00000509552 IGHV4-4A0A075B6R2 117 aa13.68□□□□□ -0.22
CCHCR1-228ENST00000509552 CBY3A6NI87 242 aa13.68□□□□□ -0.22
CCHCR1-228ENST00000509552 TRBV12-3P01733 135 aa13.68□□□□□ -0.22
CCHCR1-228ENST00000509552 IGHG2P01859 326 aa13.68□□□□□ -0.22
CCHCR1-228ENST00000509552 IGHV4-38-2P0DP08 117 aa13.68□□□□□ -0.22
CCHCR1-228ENST00000509552 SEC11AP67812 179 aa13.68□□□□□ -0.22
CCHCR1-228ENST00000509552 PSMG4Q5JS54 123 aa13.68□□□□□ -0.22
CCHCR1-228ENST00000509552 C20orf173Q96LM9 149 aa13.68□□□□□ -0.22
CCHCR1-228ENST00000509552 OVOL1O14753 267 aa13.67□□□□□ -0.22
CCHCR1-228ENST00000509552 BRI3O95415 125 aa13.67□□□□□ -0.22
CCHCR1-228ENST00000509552 PRSS1P07477 247 aa13.67□□□□□ -0.22
CCHCR1-228ENST00000509552 H3BUX3 64 aa13.67□□□□□ -0.22
CCHCR1-228ENST00000509552 SIVA1O15304 175 aa13.67□□□□□ -0.22
CCHCR1-228ENST00000509552 TCTAP57738 103 aa13.67□□□□□ -0.22
CCHCR1-228ENST00000509552 TMEM158Q8WZ71 300 aa13.67□□□□□ -0.22
CCHCR1-228ENST00000509552 A1L4Q6 167 aa13.66□□□□□ -0.22
CCHCR1-228ENST00000509552 NMUP48645 174 aa13.66□□□□□ -0.22
CCHCR1-228ENST00000509552 ERASQ7Z444 233 aa13.66□□□□□ -0.22
CCHCR1-228ENST00000509552 ABCA2Q9BZC7 2435 aa13.66□□□□□ -0.22
CCHCR1-228ENST00000509552 PRSS47A8MTI9 375 aa13.65□□□□□ -0.22
CCHCR1-228ENST00000509552 H3BVH4 76 aa13.65□□□□□ -0.22
CCHCR1-228ENST00000509552 PRR9Q5T870 116 aa13.65□□□□□ -0.22
CCHCR1-228ENST00000509552 Q6ZQT7 251 aa13.65□□□□□ -0.22
CCHCR1-228ENST00000509552 ITPR1Q14643 2758 aa13.65□□□□□ -0.22
CCHCR1-228ENST00000509552 IGLV2-18A0A075B6J9 118 aa13.65□□□□□ -0.22
CCHCR1-228ENST00000509552 A6NDX4 124 aa13.65□□□□□ -0.22
CCHCR1-228ENST00000509552 IGHV3-11P01762 117 aa13.65□□□□□ -0.22
CCHCR1-228ENST00000509552 PF4V1P10720 104 aa13.65□□□□□ -0.22
CCHCR1-228ENST00000509552 RPL11P62913 178 aaKnown RBP13.65□□□□□ -0.22
CCHCR1-228ENST00000509552 TRAV21A0A0B4J279 112 aa13.64□□□□□ -0.23
CCHCR1-228ENST00000509552 J3KRW8 73 aa13.64□□□□□ -0.23
CCHCR1-228ENST00000509552 ATP5LO75964 103 aa13.64□□□□□ -0.23
CCHCR1-228ENST00000509552 ATP5J2P56134 94 aa13.64□□□□□ -0.23
CCHCR1-228ENST00000509552 LAGE3Q14657 143 aa13.64□□□□□ -0.23
CCHCR1-228ENST00000509552 ODF1Q14990 250 aa13.64□□□□□ -0.23
CCHCR1-228ENST00000509552 GPHB5Q86YW7 130 aa13.64□□□□□ -0.23
CCHCR1-228ENST00000509552 NRACQ8N912 160 aa13.64□□□□□ -0.23
CCHCR1-228ENST00000509552 TRAV26-2A0A0B4J265 109 aa13.64□□□□□ -0.23
CCHCR1-228ENST00000509552 OR4X2Q8NGF9 303 aa13.64□□□□□ -0.23
CCHCR1-228ENST00000509552 PEF1Q9UBV8 284 aaKnown RBP13.64□□□□□ -0.23
CCHCR1-228ENST00000509552 SMPXQ9UHP9 88 aa13.64□□□□□ -0.23
CCHCR1-228ENST00000509552 C7orf71A4D174 169 aa13.63□□□□□ -0.23
CCHCR1-228ENST00000509552 SOCS3O14543 225 aa13.63□□□□□ -0.23
CCHCR1-228ENST00000509552 HSD52Q0P140 79 aa13.63□□□□□ -0.23
CCHCR1-228ENST00000509552 MRAP2Q96G30 205 aa13.63□□□□□ -0.23
CCHCR1-228ENST00000509552 ZMAT4Q9H898 229 aa13.63□□□□□ -0.23
CCHCR1-228ENST00000509552 A0A0G2JLM5 398 aa13.63□□□□□ -0.23
CCHCR1-228ENST00000509552 A6NDN8 102 aa13.63□□□□□ -0.23
CCHCR1-228ENST00000509552 MSMBP08118 114 aa13.63□□□□□ -0.23
CCHCR1-228ENST00000509552 SMIM17P0DL12 118 aa13.63□□□□□ -0.23
CCHCR1-228ENST00000509552 ZFAND2AQ8N6M9 145 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms