RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 SSX7Q7RTT5 188 aa7.55□□□□□ -1.2
POLR2J3-213ENST00000508848 COX8CQ7Z4L0 72 aa7.55□□□□□ -1.2
POLR2J3-213ENST00000508848 SLC51BQ86UW2 128 aa7.55□□□□□ -1.2
POLR2J3-213ENST00000508848 ZNF680Q8NEM1 530 aa7.55□□□□□ -1.2
POLR2J3-213ENST00000508848 HIST1H2BAQ96A08 127 aa7.55□□□□□ -1.2
POLR2J3-213ENST00000508848 ATG101Q9BSB4 218 aa7.55□□□□□ -1.2
POLR2J3-213ENST00000508848 DYNC2H1Q8NCM8 4307 aaKnown RBP7.54□□□□□ -1.2
POLR2J3-213ENST00000508848 DEFB131BA0A096LNP1 70 aa7.54□□□□□ -1.2
POLR2J3-213ENST00000508848 TRAV12-3A0A0B4J271 114 aa7.54□□□□□ -1.2
POLR2J3-213ENST00000508848 MAP1LC3B2A6NCE7 125 aa7.54□□□□□ -1.2
POLR2J3-213ENST00000508848 FAM74A7A6NL05 159 aa7.54□□□□□ -1.2
POLR2J3-213ENST00000508848 GGTLC3B5MD39 225 aa7.54□□□□□ -1.2
POLR2J3-213ENST00000508848 F6UZH7 168 aa7.54□□□□□ -1.2
POLR2J3-213ENST00000508848 CD300CQ08708 224 aa7.54□□□□□ -1.2
POLR2J3-213ENST00000508848 LGALS9BQ3B8N2 356 aa7.54□□□□□ -1.2
POLR2J3-213ENST00000508848 Q6ZTC4 211 aa7.54□□□□□ -1.2
POLR2J3-213ENST00000508848 GOLT1AQ6ZVE7 132 aa7.54□□□□□ -1.2
POLR2J3-213ENST00000508848 EIF4E3Q8N5X7 224 aaKnown RBP7.54□□□□□ -1.2
POLR2J3-213ENST00000508848 CYB561D1Q8N8Q1 229 aa7.54□□□□□ -1.2
POLR2J3-213ENST00000508848 TMEM75Q8N9X5 138 aa7.54□□□□□ -1.2
POLR2J3-213ENST00000508848 MAP1LC3BQ9GZQ8 125 aa7.54□□□□□ -1.2
POLR2J3-213ENST00000508848 CELA1Q9UNI1 258 aa7.54□□□□□ -1.2
POLR2J3-213ENST00000508848 KLF12Q9Y4X4 402 aa7.54□□□□□ -1.2
POLR2J3-213ENST00000508848 MUC4Q99102 2169 aa7.53□□□□□ -1.2
POLR2J3-213ENST00000508848 TRBV6-1A0A0K0K1D8 114 aa7.53□□□□□ -1.2
POLR2J3-213ENST00000508848 RNASE4P34096 147 aaKnown RBP7.53□□□□□ -1.2
POLR2J3-213ENST00000508848 SULT1A2P50226 295 aa7.53□□□□□ -1.2
POLR2J3-213ENST00000508848 LGALS9CQ6DKI2 356 aa7.53□□□□□ -1.2
POLR2J3-213ENST00000508848 TXNDC17Q9BRA2 123 aa7.53□□□□□ -1.2
POLR2J3-213ENST00000508848 IGHV1OR15-1A0A075B7D0 117 aa7.52□□□□□ -1.21
POLR2J3-213ENST00000508848 TEX46H3BTG2 121 aa7.52□□□□□ -1.21
POLR2J3-213ENST00000508848 IGLV2-11P01706 119 aa7.52□□□□□ -1.21
POLR2J3-213ENST00000508848 S100A9P06702 114 aaKnown RBP7.52□□□□□ -1.21
POLR2J3-213ENST00000508848 H2AFB1P0C5Y9 115 aa7.52□□□□□ -1.21
POLR2J3-213ENST00000508848 DAD1P61803 113 aa7.52□□□□□ -1.21
POLR2J3-213ENST00000508848 C11orf72Q8NBR9 251 aa7.52□□□□□ -1.21
POLR2J3-213ENST00000508848 SFT2D1Q8WV19 159 aa7.52□□□□□ -1.21
POLR2J3-213ENST00000508848 NDFIP1Q9BT67 221 aa7.52□□□□□ -1.21
POLR2J3-213ENST00000508848 TREM1Q9NP99 234 aa7.52□□□□□ -1.21
POLR2J3-213ENST00000508848 APLNQ9ULZ1 77 aa7.52□□□□□ -1.21
POLR2J3-213ENST00000508848 ZFP30Q9Y2G7 519 aa7.52□□□□□ -1.21
POLR2J3-213ENST00000508848 TRAV21A0A0B4J279 112 aa7.51□□□□□ -1.21
POLR2J3-213ENST00000508848 SNURFLB1AK76 121 aa7.51□□□□□ -1.21
POLR2J3-213ENST00000508848 H3BNG1 76 aa7.51□□□□□ -1.21
POLR2J3-213ENST00000508848 RGS13O14921 159 aa7.51□□□□□ -1.21
POLR2J3-213ENST00000508848 EIF3GO75821 320 aaKnown RBP eCLIP7.51□□□□□ -1.21
POLR2J3-213ENST00000508848 EMP1P54849 157 aa7.51□□□□□ -1.21
POLR2J3-213ENST00000508848 TCL1AP56279 114 aa7.51□□□□□ -1.21
POLR2J3-213ENST00000508848 FLI1Q01543 452 aaPredicted RBP7.51□□□□□ -1.21
POLR2J3-213ENST00000508848 BTN1A1Q13410 526 aa7.51□□□□□ -1.21
POLR2J3-213ENST00000508848 ZFP69Q49AA0 526 aa7.51□□□□□ -1.21
POLR2J3-213ENST00000508848 C9orf62Q8N4C0 152 aa7.51□□□□□ -1.21
POLR2J3-213ENST00000508848 TVP23CQ96ET8 276 aa7.51□□□□□ -1.21
POLR2J3-213ENST00000508848 KCNS1Q96KK3 526 aa7.51□□□□□ -1.21
POLR2J3-213ENST00000508848 SPXQ9BT56 116 aa7.51□□□□□ -1.21
POLR2J3-213ENST00000508848 TMPRSS5Q9H3S3 457 aa7.51□□□□□ -1.21
POLR2J3-213ENST00000508848 PSG8Q9UQ74 426 aa7.51□□□□□ -1.21
POLR2J3-213ENST00000508848 IFNA7P01567 189 aa7.5□□□□□ -1.21
POLR2J3-213ENST00000508848 PRM2P04554 102 aa7.5□□□□□ -1.21
POLR2J3-213ENST00000508848 ATP5G1P05496 136 aa7.5□□□□□ -1.21
POLR2J3-213ENST00000508848 TAGLN2P37802 199 aaKnown RBP7.5□□□□□ -1.21
POLR2J3-213ENST00000508848 ATP5G3P48201 142 aa7.5□□□□□ -1.21
POLR2J3-213ENST00000508848 FGF8P55075 233 aaPredicted RBP7.5□□□□□ -1.21
POLR2J3-213ENST00000508848 PRR9Q5T870 116 aa7.5□□□□□ -1.21
POLR2J3-213ENST00000508848 FAM159AQ6UWV7 190 aa7.5□□□□□ -1.21
POLR2J3-213ENST00000508848 Q8TAT8 98 aa7.5□□□□□ -1.21
POLR2J3-213ENST00000508848 FAM213BQ8TBF2 198 aa7.5□□□□□ -1.21
POLR2J3-213ENST00000508848 LINC00476Q8WZB0 136 aa7.5□□□□□ -1.21
POLR2J3-213ENST00000508848 PTH2Q96A98 100 aa7.5□□□□□ -1.21
POLR2J3-213ENST00000508848 FMC1Q96HJ9 113 aa7.5□□□□□ -1.21
POLR2J3-213ENST00000508848 NDUFAF3Q9BU61 184 aa7.5□□□□□ -1.21
POLR2J3-213ENST00000508848 NOP10Q9NPE3 64 aaKnown RBP7.5□□□□□ -1.21
POLR2J3-213ENST00000508848 PLECQ15149 4684 aaKnown RBP7.49□□□□□ -1.21
POLR2J3-213ENST00000508848 TRGV11A0A075B6L2 103 aa7.49□□□□□ -1.21
POLR2J3-213ENST00000508848 IGHV4-4A0A075B6R2 117 aa7.49□□□□□ -1.21
POLR2J3-213ENST00000508848 TRAV8-1A0A0A6YYK1 113 aa7.49□□□□□ -1.21
POLR2J3-213ENST00000508848 IGLL5B9A064 214 aa7.49□□□□□ -1.21
POLR2J3-213ENST00000508848 PEX7O00628 323 aa7.49□□□□□ -1.21
POLR2J3-213ENST00000508848 SPINK4O60575 86 aa7.49□□□□□ -1.21
POLR2J3-213ENST00000508848 PFN1P07737 140 aaKnown RBP7.49□□□□□ -1.21
POLR2J3-213ENST00000508848 HTN1P15515 57 aa7.49□□□□□ -1.21
POLR2J3-213ENST00000508848 GNG5P63218 68 aa7.49□□□□□ -1.21
POLR2J3-213ENST00000508848 SMUG1Q53HV7 270 aa7.49□□□□□ -1.21
POLR2J3-213ENST00000508848 C15orf53Q8NAA6 179 aa7.49□□□□□ -1.21
POLR2J3-213ENST00000508848 RASL10AQ92737 203 aa7.49□□□□□ -1.21
POLR2J3-213ENST00000508848 MANBALQ9NQG1 85 aa7.49□□□□□ -1.21
POLR2J3-213ENST00000508848 FABP5P3A8MUU1 101 aa7.48□□□□□ -1.21
POLR2J3-213ENST00000508848 CIDEAO60543 219 aa7.48□□□□□ -1.21
POLR2J3-213ENST00000508848 NDUFS6O75380 124 aaKnown RBP7.48□□□□□ -1.21
POLR2J3-213ENST00000508848 PRB4P10163 310 aaPredicted RBP7.48□□□□□ -1.21
POLR2J3-213ENST00000508848 SLAQ13239 276 aa7.48□□□□□ -1.21
POLR2J3-213ENST00000508848 TMEM183BQ1AE95 376 aa7.48□□□□□ -1.21
POLR2J3-213ENST00000508848 PIK3CD-AS1Q5SR53 167 aa7.48□□□□□ -1.21
POLR2J3-213ENST00000508848 IQCF2Q8IXL9 164 aa7.48□□□□□ -1.21
POLR2J3-213ENST00000508848 J3KRW8 73 aa7.47□□□□□ -1.21
POLR2J3-213ENST00000508848 PAGE4O60829 102 aa7.47□□□□□ -1.21
POLR2J3-213ENST00000508848 P0DMU3 169 aa7.47□□□□□ -1.21
POLR2J3-213ENST00000508848 FAM231AP0DMU4 169 aa7.47□□□□□ -1.21
POLR2J3-213ENST00000508848 FAM231CP0DMU5 169 aa7.47□□□□□ -1.21
POLR2J3-213ENST00000508848 DEFB130BP0DP73 79 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms