RNA–Protein interactions for RNA: ENST00000508317.5

DDR1-263, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-263ENST00000508317 TMEM167BQ9NRX6 74 aa11.59□□□□□ -0.55
DDR1-263ENST00000508317 SNURFLB1AK76 121 aa11.58□□□□□ -0.56
DDR1-263ENST00000508317 H2AFB1P0C5Y9 115 aa11.58□□□□□ -0.56
DDR1-263ENST00000508317 RANP62826 216 aaKnown RBP11.58□□□□□ -0.56
DDR1-263ENST00000508317 SUN5Q8TC36 379 aa11.58□□□□□ -0.56
DDR1-263ENST00000508317 SFT2D1Q8WV19 159 aa11.58□□□□□ -0.56
DDR1-263ENST00000508317 MBD3L1Q8WWY6 194 aa11.58□□□□□ -0.56
DDR1-263ENST00000508317 PRELID1Q9Y255 219 aa11.58□□□□□ -0.56
DDR1-263ENST00000508317 HSPG2P98160 4391 aa11.57□□□□□ -0.56
DDR1-263ENST00000508317 CRXO43186 299 aaPredicted RBP11.57□□□□□ -0.56
DDR1-263ENST00000508317 LEPP41159 167 aa11.57□□□□□ -0.56
DDR1-263ENST00000508317 ALKAL2Q6UX46 152 aa11.57□□□□□ -0.56
DDR1-263ENST00000508317 Q6ZR54 194 aa11.57□□□□□ -0.56
DDR1-263ENST00000508317 IQCF2Q8IXL9 164 aa11.57□□□□□ -0.56
DDR1-263ENST00000508317 TMEM263Q8WUH6 116 aaKnown RBP11.57□□□□□ -0.56
DDR1-263ENST00000508317 MRPL53Q96EL3 112 aaKnown RBP11.57□□□□□ -0.56
DDR1-263ENST00000508317 A0A1B0GVY2 172 aa11.56□□□□□ -0.56
DDR1-263ENST00000508317 FGF8P55075 233 aaPredicted RBP11.56□□□□□ -0.56
DDR1-263ENST00000508317 OR5I1Q13606 314 aa11.56□□□□□ -0.56
DDR1-263ENST00000508317 ICAM4Q14773 271 aa11.56□□□□□ -0.56
DDR1-263ENST00000508317 EXOC3-AS1Q8N2X6 119 aa11.56□□□□□ -0.56
DDR1-263ENST00000508317 NOP10Q9NPE3 64 aaKnown RBP11.56□□□□□ -0.56
DDR1-263ENST00000508317 TTC32Q5I0X7 151 aa11.55□□□□□ -0.56
DDR1-263ENST00000508317 FAM74A1Q5RGS3 127 aa11.55□□□□□ -0.56
DDR1-263ENST00000508317 Q9H3A6 140 aa11.55□□□□□ -0.56
DDR1-263ENST00000508317 PKD1P98161 4303 aa11.54□□□□□ -0.56
DDR1-263ENST00000508317 TEX46H3BTG2 121 aa11.54□□□□□ -0.56
DDR1-263ENST00000508317 AZU1P20160 251 aa11.54□□□□□ -0.56
DDR1-263ENST00000508317 CSN1S1P47710 185 aa11.54□□□□□ -0.56
DDR1-263ENST00000508317 C6orf223Q8N319 242 aa11.54□□□□□ -0.56
DDR1-263ENST00000508317 TMPRSS5Q9H3S3 457 aa11.54□□□□□ -0.56
DDR1-263ENST00000508317 OTORQ9NRC9 128 aa11.54□□□□□ -0.56
DDR1-263ENST00000508317 TRAV1-1A0A0B4J248 108 aa11.53□□□□□ -0.56
DDR1-263ENST00000508317 NBDYA0A0U1RRE5 68 aa11.53□□□□□ -0.56
DDR1-263ENST00000508317 A0A1W2PRE2 83 aa11.53□□□□□ -0.56
DDR1-263ENST00000508317 PGPA6NDG6 321 aa11.53□□□□□ -0.56
DDR1-263ENST00000508317 M0R3E3 92 aa11.53□□□□□ -0.56
DDR1-263ENST00000508317 RXFP4Q8TDU9 374 aa11.53□□□□□ -0.56
DDR1-263ENST00000508317 A0A1B0GV50 99 aa11.52□□□□□ -0.57
DDR1-263ENST00000508317 PRM2P04554 102 aa11.52□□□□□ -0.57
DDR1-263ENST00000508317 PPT1P50897 306 aa11.52□□□□□ -0.57
DDR1-263ENST00000508317 BLOC1S1P78537 153 aa11.52□□□□□ -0.57
DDR1-263ENST00000508317 TEX261Q6UWH6 196 aa11.52□□□□□ -0.57
DDR1-263ENST00000508317 CMTM2Q8TAZ6 248 aa11.52□□□□□ -0.57
DDR1-263ENST00000508317 NKX6-2Q9C056 277 aaPredicted RBP11.52□□□□□ -0.57
DDR1-263ENST00000508317 PRAC2D3DTV9 90 aa11.51□□□□□ -0.57
DDR1-263ENST00000508317 J3KRW8 73 aa11.51□□□□□ -0.57
DDR1-263ENST00000508317 IFNA7P01567 189 aa11.51□□□□□ -0.57
DDR1-263ENST00000508317 ARL6IP6Q8N6S5 226 aa11.51□□□□□ -0.57
DDR1-263ENST00000508317 PYGO2Q9BRQ0 406 aa11.51□□□□□ -0.57
DDR1-263ENST00000508317 TRGV2A0A075B6R0 118 aa11.5□□□□□ -0.57
DDR1-263ENST00000508317 GAGE12BA1L429 117 aa11.5□□□□□ -0.57
DDR1-263ENST00000508317 C16orf90A8MZG2 172 aa11.5□□□□□ -0.57
DDR1-263ENST00000508317 GAGE7O76087 117 aa11.5□□□□□ -0.57
DDR1-263ENST00000508317 GAGE12FP0CL80 117 aa11.5□□□□□ -0.57
DDR1-263ENST00000508317 GAGE12GP0CL81 117 aa11.5□□□□□ -0.57
DDR1-263ENST00000508317 GAGE12IP0CL82 117 aa11.5□□□□□ -0.57
DDR1-263ENST00000508317 UBE2G2P60604 165 aa11.5□□□□□ -0.57
DDR1-263ENST00000508317 SUMO1P63165 101 aaKnown RBP11.5□□□□□ -0.57
DDR1-263ENST00000508317 RNASE8Q8TDE3 154 aaKnown RBP11.5□□□□□ -0.57
DDR1-263ENST00000508317 ODF3Q96PU9 254 aa11.5□□□□□ -0.57
DDR1-263ENST00000508317 ARL2-SNX15V9GYD0 113 aa11.5□□□□□ -0.57
DDR1-263ENST00000508317 TRAV26-1A0A087WT03 109 aa11.49□□□□□ -0.57
DDR1-263ENST00000508317 FAM74A7A6NL05 159 aa11.49□□□□□ -0.57
DDR1-263ENST00000508317 SLC25A5P05141 298 aaKnown RBP11.49□□□□□ -0.57
DDR1-263ENST00000508317 PRB4P10163 310 aaPredicted RBP11.49□□□□□ -0.57
DDR1-263ENST00000508317 C5orf17Q8NAS9 161 aa11.49□□□□□ -0.57
DDR1-263ENST00000508317 ZNF680Q8NEM1 530 aa11.49□□□□□ -0.57
DDR1-263ENST00000508317 ZNRF2Q8NHG8 242 aa11.49□□□□□ -0.57
DDR1-263ENST00000508317 TRAV12-3A0A0B4J271 114 aa11.48□□□□□ -0.57
DDR1-263ENST00000508317 RBAKDNA6NC62 111 aa11.48□□□□□ -0.57
DDR1-263ENST00000508317 GGTLC3B5MD39 225 aa11.48□□□□□ -0.57
DDR1-263ENST00000508317 DIRC3C9JPN6 131 aa11.48□□□□□ -0.57
DDR1-263ENST00000508317 NPIPB6E9PJ23 425 aa11.48□□□□□ -0.57
DDR1-263ENST00000508317 CCL20P78556 96 aa11.48□□□□□ -0.57
DDR1-263ENST00000508317 GFI1BQ5VTD9 330 aa11.48□□□□□ -0.57
DDR1-263ENST00000508317 LINC00477Q96M19 166 aa11.48□□□□□ -0.57
DDR1-263ENST00000508317 Q9H8V8 135 aa11.48□□□□□ -0.57
DDR1-263ENST00000508317 MANBALQ9NQG1 85 aa11.48□□□□□ -0.57
DDR1-263ENST00000508317 IGKV2-40A0A087WW87 121 aaPredicted RBP11.47□□□□□ -0.57
DDR1-263ENST00000508317 A0A0J9YY99 117 aa11.47□□□□□ -0.57
DDR1-263ENST00000508317 PLAC8L1A1L4L8 177 aa11.47□□□□□ -0.57
DDR1-263ENST00000508317 PAGE4O60829 102 aa11.47□□□□□ -0.57
DDR1-263ENST00000508317 IGKV2D-40P01614 121 aaPredicted RBP11.47□□□□□ -0.57
DDR1-263ENST00000508317 CST9LP1Q5W188 147 aa11.47□□□□□ -0.57
DDR1-263ENST00000508317 C9orf47Q6ZRZ4 202 aa11.47□□□□□ -0.57
DDR1-263ENST00000508317 EPDR1Q9UM22 224 aa11.47□□□□□ -0.57
DDR1-263ENST00000508317 RPH3ALQ9UNE2 315 aa11.47□□□□□ -0.57
DDR1-263ENST00000508317 LINC00588Q9Y4M8 146 aa11.47□□□□□ -0.57
DDR1-263ENST00000508317 SERTM2A0A1B0GWG4 89 aa11.46□□□□□ -0.57
DDR1-263ENST00000508317 H3BNG1 76 aa11.46□□□□□ -0.57
DDR1-263ENST00000508317 K7EQM0 130 aa11.46□□□□□ -0.57
DDR1-263ENST00000508317 IFNA1P01562 189 aa11.46□□□□□ -0.57
DDR1-263ENST00000508317 TCRAP04437 139 aa11.46□□□□□ -0.57
DDR1-263ENST00000508317 ERCC8Q13216 396 aa11.46□□□□□ -0.57
DDR1-263ENST00000508317 TMEM78Q5T7P6 136 aa11.46□□□□□ -0.57
DDR1-263ENST00000508317 ZNF575Q86XF7 245 aa11.46□□□□□ -0.57
DDR1-263ENST00000508317 TCEAL7Q9BRU2 100 aa11.46□□□□□ -0.57
DDR1-263ENST00000508317 AGPAT4-IT1Q9H0P7 198 aa11.46□□□□□ -0.57
DDR1-263ENST00000508317 GNG13Q9P2W3 67 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms