RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 C5orf17Q8NAS9 161 aa6.54□□□□□ -1.36
UBE2D3-223ENST00000508249 ZNF680Q8NEM1 530 aa6.54□□□□□ -1.36
UBE2D3-223ENST00000508249 STOML3Q8TAV4 291 aa6.54□□□□□ -1.36
UBE2D3-223ENST00000508249 AGPAT4-IT1Q9H0P7 198 aa6.54□□□□□ -1.36
UBE2D3-223ENST00000508249 SH3BGRL3Q9H299 93 aa6.54□□□□□ -1.36
UBE2D3-223ENST00000508249 CYTL1Q9NRR1 136 aa6.54□□□□□ -1.36
UBE2D3-223ENST00000508249 ZNF492Q9P255 531 aa6.54□□□□□ -1.36
UBE2D3-223ENST00000508249 YTHDF2Q9Y5A9 579 aaKnown RBP6.54□□□□□ -1.36
UBE2D3-223ENST00000508249 A0A1W2PRE2 83 aa6.53□□□□□ -1.36
UBE2D3-223ENST00000508249 PGPA6NDG6 321 aa6.53□□□□□ -1.36
UBE2D3-223ENST00000508249 PFDN1O60925 122 aa6.53□□□□□ -1.36
UBE2D3-223ENST00000508249 GPX1P07203 203 aa6.53□□□□□ -1.36
UBE2D3-223ENST00000508249 TPT1P13693 172 aaKnown RBP6.53□□□□□ -1.36
UBE2D3-223ENST00000508249 C12orf74Q32Q52 190 aa6.53□□□□□ -1.36
UBE2D3-223ENST00000508249 FAM222AQ5U5X8 452 aa6.53□□□□□ -1.36
UBE2D3-223ENST00000508249 TCEAL7Q9BRU2 100 aa6.53□□□□□ -1.36
UBE2D3-223ENST00000508249 NDFIP1Q9BT67 221 aa6.53□□□□□ -1.36
UBE2D3-223ENST00000508249 ZNF471Q9BX82 626 aaPredicted RBP6.53□□□□□ -1.36
UBE2D3-223ENST00000508249 SCRT2Q9NQ03 307 aa6.53□□□□□ -1.36
UBE2D3-223ENST00000508249 CELA1Q9UNI1 258 aa6.53□□□□□ -1.36
UBE2D3-223ENST00000508249 TIMM8BQ9Y5J9 83 aaPredicted RBP6.53□□□□□ -1.36
UBE2D3-223ENST00000508249 ARL2-SNX15V9GYD0 113 aa6.53□□□□□ -1.36
UBE2D3-223ENST00000508249 IGKV2-40A0A087WW87 121 aaPredicted RBP6.52□□□□□ -1.37
UBE2D3-223ENST00000508249 DEFB131BA0A096LNP1 70 aa6.52□□□□□ -1.37
UBE2D3-223ENST00000508249 ZNF705GA8MUZ8 300 aaPredicted RBP6.52□□□□□ -1.37
UBE2D3-223ENST00000508249 C16orf90A8MZG2 172 aa6.52□□□□□ -1.37
UBE2D3-223ENST00000508249 SNURFLB1AK76 121 aa6.52□□□□□ -1.37
UBE2D3-223ENST00000508249 SMLR1H3BR10 107 aa6.52□□□□□ -1.37
UBE2D3-223ENST00000508249 IGKV2D-40P01614 121 aaPredicted RBP6.52□□□□□ -1.37
UBE2D3-223ENST00000508249 EMP1P54849 157 aa6.52□□□□□ -1.37
UBE2D3-223ENST00000508249 DAD1P61803 113 aa6.52□□□□□ -1.37
UBE2D3-223ENST00000508249 ERCC8Q13216 396 aa6.52□□□□□ -1.37
UBE2D3-223ENST00000508249 ANXA2RQ3ZCQ2 193 aa6.52□□□□□ -1.37
UBE2D3-223ENST00000508249 EIF4E3Q8N5X7 224 aaKnown RBP6.52□□□□□ -1.37
UBE2D3-223ENST00000508249 OR11H4Q8NGC9 324 aa6.52□□□□□ -1.37
UBE2D3-223ENST00000508249 RNASE8Q8TDE3 154 aaKnown RBP6.52□□□□□ -1.37
UBE2D3-223ENST00000508249 HYLS1Q96M11 299 aa6.52□□□□□ -1.37
UBE2D3-223ENST00000508249 IGLV2-18A0A075B6J9 118 aa6.51□□□□□ -1.37
UBE2D3-223ENST00000508249 TRAV12-3A0A0B4J271 114 aa6.51□□□□□ -1.37
UBE2D3-223ENST00000508249 MAP1LC3B2A6NCE7 125 aa6.51□□□□□ -1.37
UBE2D3-223ENST00000508249 C1QBP02746 253 aa6.51□□□□□ -1.37
UBE2D3-223ENST00000508249 PPT1P50897 306 aa6.51□□□□□ -1.37
UBE2D3-223ENST00000508249 RAB5CP51148 216 aa6.51□□□□□ -1.37
UBE2D3-223ENST00000508249 TNP2Q05952 138 aa6.51□□□□□ -1.37
UBE2D3-223ENST00000508249 LGALSLQ3ZCW2 172 aaPredicted RBP6.51□□□□□ -1.37
UBE2D3-223ENST00000508249 IBA57Q5T440 356 aaKnown RBP6.51□□□□□ -1.37
UBE2D3-223ENST00000508249 AKAP14Q86UN6 197 aa6.51□□□□□ -1.37
UBE2D3-223ENST00000508249 ZFAND2AQ8N6M9 145 aa6.51□□□□□ -1.37
UBE2D3-223ENST00000508249 VGLL1Q99990 258 aa6.51□□□□□ -1.37
UBE2D3-223ENST00000508249 MAP1LC3BQ9GZQ8 125 aa6.51□□□□□ -1.37
UBE2D3-223ENST00000508249 IGHV1OR15-1A0A075B7D0 117 aa6.5□□□□□ -1.37
UBE2D3-223ENST00000508249 PLAC8L1A1L4L8 177 aa6.5□□□□□ -1.37
UBE2D3-223ENST00000508249 F6UZH7 168 aa6.5□□□□□ -1.37
UBE2D3-223ENST00000508249 RGS13O14921 159 aa6.5□□□□□ -1.37
UBE2D3-223ENST00000508249 HMGB3O15347 200 aaKnown RBP6.5□□□□□ -1.37
UBE2D3-223ENST00000508249 ZNF324O75467 553 aaPredicted RBP6.5□□□□□ -1.37
UBE2D3-223ENST00000508249 TCRAP04437 139 aa6.5□□□□□ -1.37
UBE2D3-223ENST00000508249 P0DMU3 169 aa6.5□□□□□ -1.37
UBE2D3-223ENST00000508249 FAM231AP0DMU4 169 aa6.5□□□□□ -1.37
UBE2D3-223ENST00000508249 FAM231CP0DMU5 169 aa6.5□□□□□ -1.37
UBE2D3-223ENST00000508249 FHITP49789 147 aa6.5□□□□□ -1.37
UBE2D3-223ENST00000508249 DAZ2Q13117 558 aaKnown RBP6.5□□□□□ -1.37
UBE2D3-223ENST00000508249 BTN1A1Q13410 526 aa6.5□□□□□ -1.37
UBE2D3-223ENST00000508249 Q6AWC8 147 aa6.5□□□□□ -1.37
UBE2D3-223ENST00000508249 GOLT1AQ6ZVE7 132 aa6.5□□□□□ -1.37
UBE2D3-223ENST00000508249 TMUB2Q71RG4 321 aa6.5□□□□□ -1.37
UBE2D3-223ENST00000508249 IQCF2Q8IXL9 164 aa6.5□□□□□ -1.37
UBE2D3-223ENST00000508249 CYB561D1Q8N8Q1 229 aa6.5□□□□□ -1.37
UBE2D3-223ENST00000508249 TMEM75Q8N9X5 138 aa6.5□□□□□ -1.37
UBE2D3-223ENST00000508249 HIST1H2BAQ96A08 127 aa6.5□□□□□ -1.37
UBE2D3-223ENST00000508249 ATG101Q9BSB4 218 aa6.5□□□□□ -1.37
UBE2D3-223ENST00000508249 NDUFAF3Q9BU61 184 aa6.5□□□□□ -1.37
UBE2D3-223ENST00000508249 SRRM2Q9UQ35 2752 aaKnown RBP6.49□□□□□ -1.37
UBE2D3-223ENST00000508249 FLG2Q5D862 2391 aaPredicted RBP6.49□□□□□ -1.37
UBE2D3-223ENST00000508249 TRGV11A0A075B6L2 103 aa6.49□□□□□ -1.37
UBE2D3-223ENST00000508249 TRAV21A0A0B4J279 112 aa6.49□□□□□ -1.37
UBE2D3-223ENST00000508249 CBY3A6NI87 242 aa6.49□□□□□ -1.37
UBE2D3-223ENST00000508249 TEX46H3BTG2 121 aa6.49□□□□□ -1.37
UBE2D3-223ENST00000508249 J3KRW8 73 aa6.49□□□□□ -1.37
UBE2D3-223ENST00000508249 ATP5G1P05496 136 aa6.49□□□□□ -1.37
UBE2D3-223ENST00000508249 HTN1P15515 57 aa6.49□□□□□ -1.37
UBE2D3-223ENST00000508249 RNASE4P34096 147 aaKnown RBP6.49□□□□□ -1.37
UBE2D3-223ENST00000508249 ATP5G3P48201 142 aa6.49□□□□□ -1.37
UBE2D3-223ENST00000508249 SUMO1P63165 101 aaKnown RBP6.49□□□□□ -1.37
UBE2D3-223ENST00000508249 KIR3DS1Q14943 382 aa6.49□□□□□ -1.37
UBE2D3-223ENST00000508249 ZNF726P1Q15940 193 aa6.49□□□□□ -1.37
UBE2D3-223ENST00000508249 ZFP69Q49AA0 526 aa6.49□□□□□ -1.37
UBE2D3-223ENST00000508249 SAPCD1Q5SSQ6 148 aa6.49□□□□□ -1.37
UBE2D3-223ENST00000508249 SLC51BQ86UW2 128 aa6.49□□□□□ -1.37
UBE2D3-223ENST00000508249 LINC00612Q8N6U2 182 aa6.49□□□□□ -1.37
UBE2D3-223ENST00000508249 C15orf53Q8NAA6 179 aa6.49□□□□□ -1.37
UBE2D3-223ENST00000508249 MBD3L1Q8WWY6 194 aa6.49□□□□□ -1.37
UBE2D3-223ENST00000508249 C18orf15Q96N68 181 aa6.49□□□□□ -1.37
UBE2D3-223ENST00000508249 EPDR1Q9UM22 224 aa6.49□□□□□ -1.37
UBE2D3-223ENST00000508249 RPH3ALQ9UNE2 315 aa6.49□□□□□ -1.37
UBE2D3-223ENST00000508249 GGTLC3B5MD39 225 aa6.48□□□□□ -1.37
UBE2D3-223ENST00000508249 EIF3GO75821 320 aaKnown RBP eCLIP6.48□□□□□ -1.376e-9■■■■□ 22.8
UBE2D3-223ENST00000508249 IFNA7P01567 189 aa6.48□□□□□ -1.37
UBE2D3-223ENST00000508249 AZU1P20160 251 aa6.48□□□□□ -1.37
UBE2D3-223ENST00000508249 TCL1AP56279 114 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 127.2 ms