RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 LYRM9A8MSI8 78 aa10.75□□□□□ -0.69
RNF4-210ENST00000508235 RGS13O14921 159 aa10.75□□□□□ -0.69
RNF4-210ENST00000508235 ZNF324O75467 553 aaPredicted RBP10.75□□□□□ -0.69
RNF4-210ENST00000508235 FAM222AQ5U5X8 452 aa10.75□□□□□ -0.69
RNF4-210ENST00000508235 TMEM75Q8N9X5 138 aa10.75□□□□□ -0.69
RNF4-210ENST00000508235 LINC00467Q9BRT7 94 aa10.75□□□□□ -0.69
RNF4-210ENST00000508235 TREM1Q9NP99 234 aa10.75□□□□□ -0.69
RNF4-210ENST00000508235 CELA1Q9UNI1 258 aa10.75□□□□□ -0.69
RNF4-210ENST00000508235 TRAV8-1A0A0A6YYK1 113 aa10.74□□□□□ -0.69
RNF4-210ENST00000508235 FLI1Q01543 452 aaPredicted RBP10.74□□□□□ -0.69
RNF4-210ENST00000508235 SAPCD1Q5SSQ6 148 aa10.74□□□□□ -0.69
RNF4-210ENST00000508235 EIF4E3Q8N5X7 224 aaKnown RBP10.74□□□□□ -0.69
RNF4-210ENST00000508235 ZNF680Q8NEM1 530 aa10.74□□□□□ -0.69
RNF4-210ENST00000508235 RNASE8Q8TDE3 154 aaKnown RBP10.74□□□□□ -0.69
RNF4-210ENST00000508235 PSG8Q9UQ74 426 aa10.74□□□□□ -0.69
RNF4-210ENST00000508235 TIMM8BQ9Y5J9 83 aaPredicted RBP10.74□□□□□ -0.69
RNF4-210ENST00000508235 TRAV10A0A0B4J240 114 aa10.73□□□□□ -0.69
RNF4-210ENST00000508235 A0A1B0GV50 99 aa10.73□□□□□ -0.69
RNF4-210ENST00000508235 CBY3A6NI87 242 aa10.73□□□□□ -0.69
RNF4-210ENST00000508235 PEX7O00628 323 aa10.73□□□□□ -0.69
RNF4-210ENST00000508235 PAGE4O60829 102 aa10.73□□□□□ -0.69
RNF4-210ENST00000508235 PRM2P04554 102 aa10.73□□□□□ -0.69
RNF4-210ENST00000508235 AZU1P20160 251 aa10.73□□□□□ -0.69
RNF4-210ENST00000508235 C12orf74Q32Q52 190 aa10.73□□□□□ -0.69
RNF4-210ENST00000508235 ANXA2RQ3ZCQ2 193 aa10.73□□□□□ -0.69
RNF4-210ENST00000508235 Q6AWC8 147 aa10.73□□□□□ -0.69
RNF4-210ENST00000508235 MANBALQ9NQG1 85 aa10.73□□□□□ -0.69
RNF4-210ENST00000508235 PLAC8L1A1L4L8 177 aa10.72□□□□□ -0.69
RNF4-210ENST00000508235 SNURFLB1AK76 121 aa10.72□□□□□ -0.69
RNF4-210ENST00000508235 NKX2-5P52952 324 aaPredicted RBP10.72□□□□□ -0.69
RNF4-210ENST00000508235 PRR9Q5T870 116 aa10.72□□□□□ -0.69
RNF4-210ENST00000508235 Q6ZTC4 211 aa10.72□□□□□ -0.69
RNF4-210ENST00000508235 SGK494Q96LW2 274 aa10.72□□□□□ -0.69
RNF4-210ENST00000508235 IGHV1OR15-1A0A075B7D0 117 aa10.71□□□□□ -0.69
RNF4-210ENST00000508235 TRAV21A0A0B4J279 112 aa10.71□□□□□ -0.69
RNF4-210ENST00000508235 IGLV2-11P01706 119 aa10.71□□□□□ -0.69
RNF4-210ENST00000508235 DAD1P61803 113 aa10.71□□□□□ -0.69
RNF4-210ENST00000508235 FAM159AQ6UWV7 190 aa10.71□□□□□ -0.69
RNF4-210ENST00000508235 PRNTQ86SH4 94 aa10.71□□□□□ -0.69
RNF4-210ENST00000508235 C2CD4CQ8TF44 421 aa10.71□□□□□ -0.69
RNF4-210ENST00000508235 FMC1Q96HJ9 113 aa10.71□□□□□ -0.69
RNF4-210ENST00000508235 DEFB131BA0A096LNP1 70 aa10.7□□□□□ -0.7
RNF4-210ENST00000508235 IFNA1P01562 189 aa10.7□□□□□ -0.7
RNF4-210ENST00000508235 S100A9P06702 114 aaKnown RBP10.7□□□□□ -0.7
RNF4-210ENST00000508235 ATP5G3P48201 142 aa10.7□□□□□ -0.7
RNF4-210ENST00000508235 TCTAP57738 103 aa10.7□□□□□ -0.7
RNF4-210ENST00000508235 UBE2G1P62253 170 aa10.7□□□□□ -0.7
RNF4-210ENST00000508235 SMUG1Q53HV7 270 aa10.7□□□□□ -0.7
RNF4-210ENST00000508235 IBA57Q5T440 356 aaKnown RBP10.7□□□□□ -0.7
RNF4-210ENST00000508235 ZNF767PQ75MW2 155 aa10.7□□□□□ -0.7
RNF4-210ENST00000508235 TVP23CQ96ET8 276 aa10.7□□□□□ -0.7
RNF4-210ENST00000508235 TXNDC17Q9BRA2 123 aa10.7□□□□□ -0.7
RNF4-210ENST00000508235 GNG13Q9P2W3 67 aa10.7□□□□□ -0.7
RNF4-210ENST00000508235 AKR1C3P42330 323 aa10.69□□□□□ -0.7
RNF4-210ENST00000508235 BLOC1S1P78537 153 aa10.69□□□□□ -0.7
RNF4-210ENST00000508235 DAZ2Q13117 558 aaKnown RBP10.69□□□□□ -0.7
RNF4-210ENST00000508235 ALKAL2Q6UX46 152 aa10.69□□□□□ -0.7
RNF4-210ENST00000508235 NOP10Q9NPE3 64 aaKnown RBP10.69□□□□□ -0.7
RNF4-210ENST00000508235 ZFP30Q9Y2G7 519 aa10.69□□□□□ -0.7
RNF4-210ENST00000508235 TRGV11A0A075B6L2 103 aa10.68□□□□□ -0.7
RNF4-210ENST00000508235 TRAV34A0A0B4J273 112 aa10.68□□□□□ -0.7
RNF4-210ENST00000508235 TRBV6-1A0A0K0K1D8 114 aa10.68□□□□□ -0.7
RNF4-210ENST00000508235 PFN1P07737 140 aaKnown RBP10.68□□□□□ -0.7
RNF4-210ENST00000508235 DEFB130BP0DP73 79 aa10.68□□□□□ -0.7
RNF4-210ENST00000508235 DEFB130AP0DP74 79 aa10.68□□□□□ -0.7
RNF4-210ENST00000508235 TAGLN2P37802 199 aaKnown RBP10.68□□□□□ -0.7
RNF4-210ENST00000508235 ZNF415Q09FC8 603 aa10.68□□□□□ -0.7
RNF4-210ENST00000508235 MUC21Q5SSG8 566 aa10.68□□□□□ -0.7
RNF4-210ENST00000508235 Q86TA4 180 aa10.68□□□□□ -0.7
RNF4-210ENST00000508235 KCNS1Q96KK3 526 aa10.68□□□□□ -0.7
RNF4-210ENST00000508235 LINC00479Q96M42 142 aa10.68□□□□□ -0.7
RNF4-210ENST00000508235 C8orf49Q96NF6 230 aa10.68□□□□□ -0.7
RNF4-210ENST00000508235 KLF12Q9Y4X4 402 aa10.68□□□□□ -0.7
RNF4-210ENST00000508235 GCGP01275 180 aa10.67□□□□□ -0.7
RNF4-210ENST00000508235 TCL1AP56279 114 aa10.67□□□□□ -0.7
RNF4-210ENST00000508235 CCL20P78556 96 aa10.67□□□□□ -0.7
RNF4-210ENST00000508235 TMEM183BQ1AE95 376 aa10.67□□□□□ -0.7
RNF4-210ENST00000508235 TDRG1Q3Y452 100 aa10.67□□□□□ -0.7
RNF4-210ENST00000508235 C11orf72Q8NBR9 251 aa10.67□□□□□ -0.7
RNF4-210ENST00000508235 NAGKQ9UJ70 344 aa10.67□□□□□ -0.7
RNF4-210ENST00000508235 BOLA1Q9Y3E2 137 aa10.67□□□□□ -0.7
RNF4-210ENST00000508235 Q6ZQT7 251 aa10.66□□□□□ -0.7
RNF4-210ENST00000508235 FAM210BQ96KR6 192 aa10.66□□□□□ -0.7
RNF4-210ENST00000508235 SDF2L1Q9HCN8 221 aa10.66□□□□□ -0.7
RNF4-210ENST00000508235 GSN-AS1Q9NRJ2 163 aa10.66□□□□□ -0.7
RNF4-210ENST00000508235 IGLL5B9A064 214 aa10.65□□□□□ -0.7
RNF4-210ENST00000508235 LTAP01374 205 aa10.65□□□□□ -0.7
RNF4-210ENST00000508235 ATP5G1P05496 136 aa10.65□□□□□ -0.7
RNF4-210ENST00000508235 MEF2BQ02080 365 aaPredicted RBP10.65□□□□□ -0.7
RNF4-210ENST00000508235 LGALS9BQ3B8N2 356 aa10.65□□□□□ -0.7
RNF4-210ENST00000508235 TMEM183AQ8IXX5 376 aa10.65□□□□□ -0.7
RNF4-210ENST00000508235 LINC00612Q8N6U2 182 aa10.65□□□□□ -0.7
RNF4-210ENST00000508235 TP53TG3Q9ULZ0 132 aa10.65□□□□□ -0.7
RNF4-210ENST00000508235 SCO2A0A1W2PP80 73 aa10.64□□□□□ -0.71
RNF4-210ENST00000508235 FABP5P3A8MUU1 101 aa10.64□□□□□ -0.71
RNF4-210ENST00000508235 PDE6DO43924 150 aa10.64□□□□□ -0.71
RNF4-210ENST00000508235 BCL2P10415 239 aa10.64□□□□□ -0.71
RNF4-210ENST00000508235 HTN3P15516 51 aa10.64□□□□□ -0.71
RNF4-210ENST00000508235 ZNF80P51504 273 aaPredicted RBP10.64□□□□□ -0.71
RNF4-210ENST00000508235 COX8CQ7Z4L0 72 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms