RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 HBDP02042 147 aa8.36□□□□□ -1.07
LIN54-207ENST00000508171 TRGV3P03979 118 aa8.36□□□□□ -1.07
LIN54-207ENST00000508171 CACNG7P62955 275 aa8.36□□□□□ -1.07
LIN54-207ENST00000508171 ZNF738Q8NE65 137 aa8.36□□□□□ -1.07
LIN54-207ENST00000508171 IGHV1-69DA0A0B4J2H0 117 aa8.36□□□□□ -1.07
LIN54-207ENST00000508171 IGHV1-69P01742 117 aa8.36□□□□□ -1.07
LIN54-207ENST00000508171 LY6EQ16553 131 aa8.36□□□□□ -1.07
LIN54-207ENST00000508171 C19orf54Q5BKX5 351 aa8.36□□□□□ -1.07
LIN54-207ENST00000508171 UNQ9165/PRO28630Q6UXU0 137 aa8.36□□□□□ -1.07
LIN54-207ENST00000508171 MOB4Q9Y3A3 225 aa8.36□□□□□ -1.07
LIN54-207ENST00000508171 CSPG4Q6UVK1 2322 aa8.36□□□□□ -1.07
LIN54-207ENST00000508171 IGF1P05019 195 aa8.36□□□□□ -1.07
LIN54-207ENST00000508171 IGHV4-38-2P0DP08 117 aa8.36□□□□□ -1.07
LIN54-207ENST00000508171 COX8AP10176 69 aa8.36□□□□□ -1.07
LIN54-207ENST00000508171 PTTG1IPP53801 180 aa8.36□□□□□ -1.07
LIN54-207ENST00000508171 TMEM78Q5T7P6 136 aa8.36□□□□□ -1.07
LIN54-207ENST00000508171 C18orf15Q96N68 181 aa8.36□□□□□ -1.07
LIN54-207ENST00000508171 SMAD7O15105 426 aaKnown RBP8.35□□□□□ -1.07
LIN54-207ENST00000508171 TNFRSF6BO95407 300 aa8.35□□□□□ -1.07
LIN54-207ENST00000508171 C2orf91Q6ZV80 131 aa8.35□□□□□ -1.07
LIN54-207ENST00000508171 C20orf173Q96LM9 149 aa8.35□□□□□ -1.07
LIN54-207ENST00000508171 ARL3P36405 182 aa8.35□□□□□ -1.07
LIN54-207ENST00000508171 DEFB1P60022 68 aa8.35□□□□□ -1.07
LIN54-207ENST00000508171 IFI27L1Q96BM0 104 aa8.35□□□□□ -1.07
LIN54-207ENST00000508171 C16orf92Q96LL3 132 aa8.35□□□□□ -1.07
LIN54-207ENST00000508171 SELENOKQ9Y6D0 94 aa8.35□□□□□ -1.07
LIN54-207ENST00000508171 J3KRW8 73 aa8.34□□□□□ -1.07
LIN54-207ENST00000508171 LGALS9BQ3B8N2 356 aa8.34□□□□□ -1.07
LIN54-207ENST00000508171 LGALS9CQ6DKI2 356 aa8.34□□□□□ -1.07
LIN54-207ENST00000508171 Q6ZS46 218 aa8.34□□□□□ -1.07
LIN54-207ENST00000508171 DKK2Q9UBU2 259 aa8.34□□□□□ -1.07
LIN54-207ENST00000508171 USP9XQ93008 2570 aaPredicted RBP8.34□□□□□ -1.07
LIN54-207ENST00000508171 IGHV7-4-1A0A0J9YVY3 117 aa8.34□□□□□ -1.07
LIN54-207ENST00000508171 TAX1BP3O14907 124 aa8.34□□□□□ -1.07
LIN54-207ENST00000508171 IGHV3-11P01762 117 aa8.34□□□□□ -1.07
LIN54-207ENST00000508171 HIST1H1AQ02539 215 aaPredicted RBP8.34□□□□□ -1.07
LIN54-207ENST00000508171 PRR9Q5T870 116 aa8.34□□□□□ -1.07
LIN54-207ENST00000508171 C9orf47Q6ZRZ4 202 aa8.34□□□□□ -1.07
LIN54-207ENST00000508171 LCNL1Q6ZST4 164 aa8.34□□□□□ -1.07
LIN54-207ENST00000508171 GLMPQ8WWB7 406 aa8.34□□□□□ -1.07
LIN54-207ENST00000508171 KLK15Q9H2R5 256 aa8.34□□□□□ -1.07
LIN54-207ENST00000508171 MAP1LC3AQ9H492 121 aa8.34□□□□□ -1.07
LIN54-207ENST00000508171 TRAV26-2A0A0B4J265 109 aa8.33□□□□□ -1.08
LIN54-207ENST00000508171 FAM223BA6NKX1 122 aa8.33□□□□□ -1.08
LIN54-207ENST00000508171 PPBPP02775 128 aa8.33□□□□□ -1.08
LIN54-207ENST00000508171 FGF6P10767 208 aa8.33□□□□□ -1.08
LIN54-207ENST00000508171 LEPP41159 167 aa8.33□□□□□ -1.08
LIN54-207ENST00000508171 BLCAPP62952 87 aa8.33□□□□□ -1.08
LIN54-207ENST00000508171 UBE2V1Q13404 147 aa8.33□□□□□ -1.08
LIN54-207ENST00000508171 C12orf54Q6X4T0 127 aa8.33□□□□□ -1.08
LIN54-207ENST00000508171 GPHB5Q86YW7 130 aa8.33□□□□□ -1.08
LIN54-207ENST00000508171 FAM223AQ8IWN6 122 aa8.33□□□□□ -1.08
LIN54-207ENST00000508171 PIEZO1Q92508 2521 aa8.33□□□□□ -1.08
LIN54-207ENST00000508171 IGSF10Q6WRI0 2623 aa8.33□□□□□ -1.08
LIN54-207ENST00000508171 SPRY2O43597 315 aa8.33□□□□□ -1.08
LIN54-207ENST00000508171 MEGF9Q9H1U4 602 aa8.33□□□□□ -1.08
LIN54-207ENST00000508171 H3BUX3 64 aa8.32□□□□□ -1.08
LIN54-207ENST00000508171 DEFB125Q8N687 156 aa8.32□□□□□ -1.08
LIN54-207ENST00000508171 ZANQ9Y493 2812 aa8.32□□□□□ -1.08
LIN54-207ENST00000508171 CBY3A6NI87 242 aa8.32□□□□□ -1.08
LIN54-207ENST00000508171 C10orf105Q8TEF2 133 aa8.32□□□□□ -1.08
LIN54-207ENST00000508171 CCL19Q99731 98 aa8.32□□□□□ -1.08
LIN54-207ENST00000508171 PIMREGQ9BSJ6 248 aa8.32□□□□□ -1.08
LIN54-207ENST00000508171 IGKV3-7A0A075B6H7 116 aa8.31□□□□□ -1.08
LIN54-207ENST00000508171 IGHV4-30-2A0A087WSY4 118 aa8.31□□□□□ -1.08
LIN54-207ENST00000508171 CRIP2P52943 208 aaPredicted RBP8.31□□□□□ -1.08
LIN54-207ENST00000508171 MRPL53Q96EL3 112 aaKnown RBP8.31□□□□□ -1.08
LIN54-207ENST00000508171 UFC1Q9Y3C8 167 aa8.31□□□□□ -1.08
LIN54-207ENST00000508171 CENPEQ02224 2701 aa8.31□□□□□ -1.08
LIN54-207ENST00000508171 LINC01546A6NGU7 62 aa8.31□□□□□ -1.08
LIN54-207ENST00000508171 FCER1GP30273 86 aa8.31□□□□□ -1.08
LIN54-207ENST00000508171 VAMP3Q15836 100 aa8.31□□□□□ -1.08
LIN54-207ENST00000508171 HIF1ANQ9NWT6 349 aa8.31□□□□□ -1.08
LIN54-207ENST00000508171 H3BVH4 76 aa8.3□□□□□ -1.08
LIN54-207ENST00000508171 ATP5J2P56134 94 aa8.3□□□□□ -1.08
LIN54-207ENST00000508171 RPL11P62913 178 aaKnown RBP8.3□□□□□ -1.08
LIN54-207ENST00000508171 PCP2Q8IVA1 136 aa8.3□□□□□ -1.08
LIN54-207ENST00000508171 TMEM158Q8WZ71 300 aa8.3□□□□□ -1.08
LIN54-207ENST00000508171 NXT2Q9NPJ8 142 aaKnown RBP8.3□□□□□ -1.08
LIN54-207ENST00000508171 IGLV2-18A0A075B6J9 118 aa8.3□□□□□ -1.08
LIN54-207ENST00000508171 IGHG2P01859 326 aa8.3□□□□□ -1.08
LIN54-207ENST00000508171 PF4V1P10720 104 aa8.3□□□□□ -1.08
LIN54-207ENST00000508171 SPANXN1Q5VSR9 72 aa8.3□□□□□ -1.08
LIN54-207ENST00000508171 BOD1L2Q8IYS8 172 aa8.3□□□□□ -1.08
LIN54-207ENST00000508171 OR2K2Q8NGT1 345 aa8.3□□□□□ -1.08
LIN54-207ENST00000508171 DPF1Q92782 380 aa8.3□□□□□ -1.08
LIN54-207ENST00000508171 CBY1Q9Y3M2 126 aa8.3□□□□□ -1.08
LIN54-207ENST00000508171 F6UB75 175 aa8.29□□□□□ -1.08
LIN54-207ENST00000508171 AVPP01185 164 aa8.29□□□□□ -1.08
LIN54-207ENST00000508171 NMUP48645 174 aa8.29□□□□□ -1.08
LIN54-207ENST00000508171 KIR3DS1Q14943 382 aa8.29□□□□□ -1.08
LIN54-207ENST00000508171 C9orf139Q6ZV77 190 aa8.29□□□□□ -1.08
LIN54-207ENST00000508171 NRACQ8N912 160 aa8.29□□□□□ -1.08
LIN54-207ENST00000508171 OR1N2Q8NGR9 330 aa8.29□□□□□ -1.08
LIN54-207ENST00000508171 DOPEY2Q9Y3R5 2298 aa8.29□□□□□ -1.08
LIN54-207ENST00000508171 NDUFA4O00483 81 aa8.29□□□□□ -1.08
LIN54-207ENST00000508171 PRSS1P07477 247 aa8.29□□□□□ -1.08
LIN54-207ENST00000508171 TMEM97Q5BJF2 176 aa8.29□□□□□ -1.08
LIN54-207ENST00000508171 ZFAND2AQ8N6M9 145 aa8.29□□□□□ -1.08
LIN54-207ENST00000508171 Q8N8P6 123 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms