RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 Q6ZQT7 251 aa10.36□□□□□ -0.75
SNCAIP-209ENST00000508017 MAPKAPK5-AS1Q8N8E1 139 aa10.36□□□□□ -0.75
SNCAIP-209ENST00000508017 Q8N8P6 123 aa10.36□□□□□ -0.75
SNCAIP-209ENST00000508017 MRPL35Q9NZE8 188 aaKnown RBP10.36□□□□□ -0.75
SNCAIP-209ENST00000508017 SMIM17P0DL12 118 aa10.35□□□□□ -0.75
SNCAIP-209ENST00000508017 CEND1Q8N111 149 aa10.35□□□□□ -0.75
SNCAIP-209ENST00000508017 IGHV7-81A0A0B4J1V7 117 aa10.34□□□□□ -0.75
SNCAIP-209ENST00000508017 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.34□□□□□ -0.75
SNCAIP-209ENST00000508017 IGHV3-49A0A0A0MS15 119 aa10.34□□□□□ -0.75
SNCAIP-209ENST00000508017 FAM90A27PA6NNH2 459 aa10.34□□□□□ -0.75
SNCAIP-209ENST00000508017 ATP5LO75964 103 aa10.34□□□□□ -0.75
SNCAIP-209ENST00000508017 Q8N6K4 173 aa10.34□□□□□ -0.75
SNCAIP-209ENST00000508017 ZFAND3Q9H8U3 227 aa10.34□□□□□ -0.75
SNCAIP-209ENST00000508017 BUB3O43684 328 aa10.33□□□□□ -0.76
SNCAIP-209ENST00000508017 PRTN3P24158 256 aa10.33□□□□□ -0.76
SNCAIP-209ENST00000508017 EFNA4P52798 201 aa10.33□□□□□ -0.76
SNCAIP-209ENST00000508017 VMO1Q7Z5L0 202 aa10.33□□□□□ -0.76
SNCAIP-209ENST00000508017 NRACQ8N912 160 aa10.33□□□□□ -0.76
SNCAIP-209ENST00000508017 TM2D2Q9BX73 214 aa10.33□□□□□ -0.76
SNCAIP-209ENST00000508017 AGPAT4-IT1Q9H0P7 198 aa10.33□□□□□ -0.76
SNCAIP-209ENST00000508017 UFC1Q9Y3C8 167 aa10.33□□□□□ -0.76
SNCAIP-209ENST00000508017 CEP295Q9C0D2 2601 aa10.33□□□□□ -0.76
SNCAIP-209ENST00000508017 C15orf32Q32M92 178 aa10.33□□□□□ -0.76
SNCAIP-209ENST00000508017 ZFHX3Q15911 3703 aa10.32□□□□□ -0.76
SNCAIP-209ENST00000508017 IGHV7-4-1A0A0J9YVY3 117 aa10.32□□□□□ -0.76
SNCAIP-209ENST00000508017 ZNF207O43670 478 aaKnown RBP10.32□□□□□ -0.76
SNCAIP-209ENST00000508017 TMEM11P17152 192 aa10.32□□□□□ -0.76
SNCAIP-209ENST00000508017 M0R1W7 72 aa10.32□□□□□ -0.76
SNCAIP-209ENST00000508017 CLEC3BP05452 202 aa10.32□□□□□ -0.76
SNCAIP-209ENST00000508017 ECSCRQ19T08 205 aa10.32□□□□□ -0.76
SNCAIP-209ENST00000508017 SMPXQ9UHP9 88 aa10.32□□□□□ -0.76
SNCAIP-209ENST00000508017 CLPSL1A2RUU4 121 aa10.31□□□□□ -0.76
SNCAIP-209ENST00000508017 GOSR1O95249 250 aa10.31□□□□□ -0.76
SNCAIP-209ENST00000508017 WFDC2Q14508 124 aa10.31□□□□□ -0.76
SNCAIP-209ENST00000508017 LAGE3Q14657 143 aa10.31□□□□□ -0.76
SNCAIP-209ENST00000508017 PSMG4Q5JS54 123 aa10.31□□□□□ -0.76
SNCAIP-209ENST00000508017 ZNF502Q8TBZ5 544 aa10.31□□□□□ -0.76
SNCAIP-209ENST00000508017 NBASA2RRP1 2371 aa10.31□□□□□ -0.76
SNCAIP-209ENST00000508017 TRAV8-2A0A0B4J237 113 aa10.31□□□□□ -0.76
SNCAIP-209ENST00000508017 IGLL5B9A064 214 aa10.31□□□□□ -0.76
SNCAIP-209ENST00000508017 E9PLD3 99 aa10.31□□□□□ -0.76
SNCAIP-209ENST00000508017 SCGB2A1O75556 95 aa10.31□□□□□ -0.76
SNCAIP-209ENST00000508017 Q8N9W7 124 aa10.31□□□□□ -0.76
SNCAIP-209ENST00000508017 MYOZ3Q8TDC0 251 aa10.31□□□□□ -0.76
SNCAIP-209ENST00000508017 A0A087WX48 190 aa10.29□□□□□ -0.76
SNCAIP-209ENST00000508017 RBAKDNA6NC62 111 aa10.29□□□□□ -0.76
SNCAIP-209ENST00000508017 SPRY2O43597 315 aa10.29□□□□□ -0.76
SNCAIP-209ENST00000508017 MSRB2Q9Y3D2 182 aa10.29□□□□□ -0.76
SNCAIP-209ENST00000508017 C12orf74Q32Q52 190 aa10.29□□□□□ -0.76
SNCAIP-209ENST00000508017 CCDC144NLQ6NUI1 221 aa10.29□□□□□ -0.76
SNCAIP-209ENST00000508017 CLEC19AQ6UXS0 136 aa10.29□□□□□ -0.76
SNCAIP-209ENST00000508017 MTURNQ8N3F0 131 aa10.29□□□□□ -0.76
SNCAIP-209ENST00000508017 HLA-DRB4P13762 266 aa10.28□□□□□ -0.76
SNCAIP-209ENST00000508017 EBI3Q14213 229 aa10.28□□□□□ -0.76
SNCAIP-209ENST00000508017 AMTNQ6UX39 209 aa10.28□□□□□ -0.76
SNCAIP-209ENST00000508017 TIMD4Q96H15 378 aa10.28□□□□□ -0.76
SNCAIP-209ENST00000508017 ZNF479Q96JC4 524 aa10.28□□□□□ -0.76
SNCAIP-209ENST00000508017 CCDC140Q96MF4 163 aa10.28□□□□□ -0.76
SNCAIP-209ENST00000508017 VKORC1Q9BQB6 163 aa10.28□□□□□ -0.76
SNCAIP-209ENST00000508017 KLK15Q9H2R5 256 aa10.28□□□□□ -0.76
SNCAIP-209ENST00000508017 HLA-DRB4X5D2U9 266 aa10.28□□□□□ -0.76
SNCAIP-209ENST00000508017 SPTA1P02549 2419 aa10.28□□□□□ -0.76
SNCAIP-209ENST00000508017 H3BMG7 143 aa10.28□□□□□ -0.76
SNCAIP-209ENST00000508017 H3BVH4 76 aa10.28□□□□□ -0.76
SNCAIP-209ENST00000508017 ATP6V0E1O15342 81 aa10.28□□□□□ -0.76
SNCAIP-209ENST00000508017 SRSF1Q07955 248 aaKnown RBP eCLIP10.28□□□□□ -0.76
SNCAIP-209ENST00000508017 CDSNQ15517 529 aa10.28□□□□□ -0.76
SNCAIP-209ENST00000508017 TMEM78Q5T7P6 136 aa10.28□□□□□ -0.76
SNCAIP-209ENST00000508017 PRR9Q5T870 116 aa10.28□□□□□ -0.76
SNCAIP-209ENST00000508017 SPANXN1Q5VSR9 72 aa10.28□□□□□ -0.76
SNCAIP-209ENST00000508017 FOXI2Q6ZQN5 318 aa10.28□□□□□ -0.76
SNCAIP-209ENST00000508017 SLC50A1Q9BRV3 221 aa10.28□□□□□ -0.76
SNCAIP-209ENST00000508017 GTSF1LQ9H1H1 148 aa10.28□□□□□ -0.76
SNCAIP-209ENST00000508017 SPANXB1Q9NS25 103 aaPredicted RBP10.28□□□□□ -0.76
SNCAIP-209ENST00000508017 LINC01548A6NM66 108 aa10.27□□□□□ -0.76
SNCAIP-209ENST00000508017 G3V318 75 aa10.27□□□□□ -0.76
SNCAIP-209ENST00000508017 ZFP36P26651 326 aaKnown RBP10.27□□□□□ -0.76
SNCAIP-209ENST00000508017 SAMD13Q5VXD3 122 aa10.27□□□□□ -0.76
SNCAIP-209ENST00000508017 C8orf86Q6ZUL3 223 aa10.27□□□□□ -0.76
SNCAIP-209ENST00000508017 FAM110DQ8TAY7 271 aaPredicted RBP10.27□□□□□ -0.76
SNCAIP-209ENST00000508017 HIST1H4GQ99525 98 aa10.27□□□□□ -0.76
SNCAIP-209ENST00000508017 PRSS47A8MTI9 375 aa10.27□□□□□ -0.77
SNCAIP-209ENST00000508017 J3KRW8 73 aa10.27□□□□□ -0.77
SNCAIP-209ENST00000508017 IGF1P05019 195 aa10.27□□□□□ -0.77
SNCAIP-209ENST00000508017 SH2D6Q7Z4S9 175 aa10.27□□□□□ -0.77
SNCAIP-209ENST00000508017 TSSC4Q9Y5U2 329 aaPredicted RBP10.27□□□□□ -0.77
SNCAIP-209ENST00000508017 AZU1P20160 251 aa10.26□□□□□ -0.77
SNCAIP-209ENST00000508017 TRBV7-3A0A075B6L6 115 aa10.26□□□□□ -0.77
SNCAIP-209ENST00000508017 LCNL1Q6ZST4 164 aa10.26□□□□□ -0.77
SNCAIP-209ENST00000508017 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.25□□□□□ -0.77
SNCAIP-209ENST00000508017 PLNP26678 52 aa10.25□□□□□ -0.77
SNCAIP-209ENST00000508017 CELSR1Q9NYQ6 3014 aa10.25□□□□□ -0.77
SNCAIP-209ENST00000508017 RAB9AP51151 201 aa10.25□□□□□ -0.77
SNCAIP-209ENST00000508017 SMAGPQ0VAQ4 97 aa10.25□□□□□ -0.77
SNCAIP-209ENST00000508017 TAL2Q16559 108 aa10.25□□□□□ -0.77
SNCAIP-209ENST00000508017 ETDBQ3ZM63 59 aa10.25□□□□□ -0.77
SNCAIP-209ENST00000508017 SMIM2Q9BVW6 85 aa10.25□□□□□ -0.77
SNCAIP-209ENST00000508017 F8VRH5 84 aa10.24□□□□□ -0.77
SNCAIP-209ENST00000508017 F8W1H4 67 aa10.24□□□□□ -0.77
SNCAIP-209ENST00000508017 MINOS1Q5TGZ0 78 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms