RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 GNG4P50150 75 aa10.36□□□□□ -0.75
RNF4-208ENST00000507247 ZNF80P51504 273 aaPredicted RBP10.36□□□□□ -0.75
RNF4-208ENST00000507247 NUTF2P61970 127 aaKnown RBP10.36□□□□□ -0.75
RNF4-208ENST00000507247 BTN1A1Q13410 526 aa10.36□□□□□ -0.75
RNF4-208ENST00000507247 RBMY1FQ15415 496 aaKnown RBP10.36□□□□□ -0.75
RNF4-208ENST00000507247 SOHLH1Q5JUK2 328 aa10.36□□□□□ -0.75
RNF4-208ENST00000507247 SAPCD1Q5SSQ6 148 aa10.36□□□□□ -0.75
RNF4-208ENST00000507247 GFI1BQ5VTD9 330 aa10.36□□□□□ -0.75
RNF4-208ENST00000507247 Q6ZQT7 251 aa10.36□□□□□ -0.75
RNF4-208ENST00000507247 ZC2HC1AQ96GY0 325 aa10.36□□□□□ -0.75
RNF4-208ENST00000507247 KIR2DL5BA0A0G2JN68 375 aa10.35□□□□□ -0.75
RNF4-208ENST00000507247 KIR2DL5BA0A0G2JPC4 375 aa10.35□□□□□ -0.75
RNF4-208ENST00000507247 TMEM218A2RU14 115 aa10.35□□□□□ -0.75
RNF4-208ENST00000507247 GPX1P07203 203 aa10.35□□□□□ -0.75
RNF4-208ENST00000507247 RNASE4P34096 147 aaKnown RBP10.35□□□□□ -0.75
RNF4-208ENST00000507247 APOC4P55056 127 aa10.35□□□□□ -0.75
RNF4-208ENST00000507247 DEFB121Q5J5C9 76 aa10.35□□□□□ -0.75
RNF4-208ENST00000507247 COX8CQ7Z4L0 72 aa10.35□□□□□ -0.75
RNF4-208ENST00000507247 KIR2DL5AQ8N109 375 aa10.35□□□□□ -0.75
RNF4-208ENST00000507247 KIR2DL5BQ8NHK3 375 aa10.35□□□□□ -0.75
RNF4-208ENST00000507247 OCC1Q8TAD7 63 aa10.35□□□□□ -0.75
RNF4-208ENST00000507247 PRKDCP78527 4128 aaKnown RBP10.35□□□□□ -0.75
RNF4-208ENST00000507247 NOTCH1P46531 2555 aa10.34□□□□□ -0.75
RNF4-208ENST00000507247 C7orf71A4D174 169 aa10.34□□□□□ -0.75
RNF4-208ENST00000507247 K7EN84 100 aa10.34□□□□□ -0.75
RNF4-208ENST00000507247 GCGP01275 180 aa10.34□□□□□ -0.75
RNF4-208ENST00000507247 AMBPP02760 352 aa10.34□□□□□ -0.75
RNF4-208ENST00000507247 CRIP1P50238 77 aa10.34□□□□□ -0.75
RNF4-208ENST00000507247 NDUFA5Q16718 116 aa10.34□□□□□ -0.75
RNF4-208ENST00000507247 FAM74A3Q4VXF1 159 aa10.34□□□□□ -0.75
RNF4-208ENST00000507247 SMUG1Q53HV7 270 aa10.34□□□□□ -0.75
RNF4-208ENST00000507247 CSNK1G2-AS1Q8NCQ2 148 aa10.34□□□□□ -0.75
RNF4-208ENST00000507247 MRAPQ8TCY5 172 aa10.34□□□□□ -0.75
RNF4-208ENST00000507247 TRAV12-3A0A0B4J271 114 aa10.33□□□□□ -0.76
RNF4-208ENST00000507247 INSP01308 110 aa10.33□□□□□ -0.76
RNF4-208ENST00000507247 MGST1P10620 155 aaKnown RBP10.33□□□□□ -0.76
RNF4-208ENST00000507247 Q6AWC8 147 aa10.33□□□□□ -0.76
RNF4-208ENST00000507247 C1orf158Q8N1D5 194 aa10.33□□□□□ -0.76
RNF4-208ENST00000507247 SMIM12Q96EX1 92 aa10.33□□□□□ -0.76
RNF4-208ENST00000507247 NAT8Q9UHE5 227 aa10.33□□□□□ -0.76
RNF4-208ENST00000507247 LY96Q9Y6Y9 160 aa10.33□□□□□ -0.76
RNF4-208ENST00000507247 F8W036 122 aa10.32□□□□□ -0.76
RNF4-208ENST00000507247 ZNF324O75467 553 aaPredicted RBP10.32□□□□□ -0.76
RNF4-208ENST00000507247 OR5I1Q13606 314 aa10.32□□□□□ -0.76
RNF4-208ENST00000507247 TMEM241Q24JQ0 296 aa10.32□□□□□ -0.76
RNF4-208ENST00000507247 PRR27Q6MZM9 219 aa10.32□□□□□ -0.76
RNF4-208ENST00000507247 LINC01551Q86U37 167 aa10.32□□□□□ -0.76
RNF4-208ENST00000507247 C1QTNF4Q9BXJ3 329 aa10.32□□□□□ -0.76
RNF4-208ENST00000507247 SDF2L1Q9HCN8 221 aa10.32□□□□□ -0.76
RNF4-208ENST00000507247 TGP01266 2768 aa10.31□□□□□ -0.76
RNF4-208ENST00000507247 UBE2CO00762 179 aa10.31□□□□□ -0.76
RNF4-208ENST00000507247 SH2D1AO60880 128 aa10.31□□□□□ -0.76
RNF4-208ENST00000507247 PFN1P07737 140 aaKnown RBP10.31□□□□□ -0.76
RNF4-208ENST00000507247 RPL23P62829 140 aaKnown RBP10.31□□□□□ -0.76
RNF4-208ENST00000507247 DEFB135Q30KP9 77 aa10.31□□□□□ -0.76
RNF4-208ENST00000507247 SBSPONQ8IVN8 264 aa10.31□□□□□ -0.76
RNF4-208ENST00000507247 SEC11CQ9BY50 192 aa10.31□□□□□ -0.76
RNF4-208ENST00000507247 C11orf21Q9P2W6 132 aa10.31□□□□□ -0.76
RNF4-208ENST00000507247 TRAV21A0A0B4J279 112 aa10.3□□□□□ -0.76
RNF4-208ENST00000507247 C10orf91Q5T1B1 145 aa10.3□□□□□ -0.76
RNF4-208ENST00000507247 FAM162BQ5T6X4 162 aa10.3□□□□□ -0.76
RNF4-208ENST00000507247 C20orf144Q9BQM9 153 aa10.3□□□□□ -0.76
RNF4-208ENST00000507247 NIPSNAP3BQ9BS92 247 aa10.3□□□□□ -0.76
RNF4-208ENST00000507247 IGHV3OR16-12A0A075B7B8 117 aa10.29□□□□□ -0.76
RNF4-208ENST00000507247 C19orf71A6NCJ1 209 aa10.29□□□□□ -0.76
RNF4-208ENST00000507247 FABP5P3A8MUU1 101 aa10.29□□□□□ -0.76
RNF4-208ENST00000507247 PRM2P04554 102 aa10.29□□□□□ -0.76
RNF4-208ENST00000507247 ADIRFQ15847 76 aa10.29□□□□□ -0.76
RNF4-208ENST00000507247 MUC21Q5SSG8 566 aa10.29□□□□□ -0.76
RNF4-208ENST00000507247 ZNF705AQ6ZN79 300 aaPredicted RBP10.29□□□□□ -0.76
RNF4-208ENST00000507247 Q6ZWC4 215 aa10.29□□□□□ -0.76
RNF4-208ENST00000507247 RETNQ9HD89 108 aa10.29□□□□□ -0.76
RNF4-208ENST00000507247 ISOC2Q96AB3 205 aa10.28□□□□□ -0.76
RNF4-208ENST00000507247 RNF183Q96D59 192 aa10.28□□□□□ -0.76
RNF4-208ENST00000507247 LINC01587Q99440 93 aa10.28□□□□□ -0.76
RNF4-208ENST00000507247 RNASE7Q9H1E1 156 aaKnown RBP10.28□□□□□ -0.76
RNF4-208ENST00000507247 CARHSP1Q9Y2V2 147 aaKnown RBP10.28□□□□□ -0.76
RNF4-208ENST00000507247 GOLT1BQ9Y3E0 138 aa10.28□□□□□ -0.76
RNF4-208ENST00000507247 IGKV3D-20A0A0C4DH25 116 aa10.27□□□□□ -0.77
RNF4-208ENST00000507247 H7BYZ3 331 aa10.27□□□□□ -0.77
RNF4-208ENST00000507247 RPL19P84098 196 aaKnown RBP10.27□□□□□ -0.77
RNF4-208ENST00000507247 ANXA2RQ3ZCQ2 193 aa10.27□□□□□ -0.77
RNF4-208ENST00000507247 TMEM256Q8N2U0 113 aa10.27□□□□□ -0.77
RNF4-208ENST00000507247 NUDT10Q8NFP7 164 aa10.27□□□□□ -0.77
RNF4-208ENST00000507247 NUDT11Q96G61 164 aa10.27□□□□□ -0.77
RNF4-208ENST00000507247 RCHY1Q96PM5 261 aa10.27□□□□□ -0.77
RNF4-208ENST00000507247 OVOL2Q9BRP0 275 aa10.27□□□□□ -0.77
RNF4-208ENST00000507247 TMEM208Q9BTX3 173 aa10.27□□□□□ -0.77
RNF4-208ENST00000507247 BIN3Q9NQY0 253 aa10.27□□□□□ -0.77
RNF4-208ENST00000507247 NAGKQ9UJ70 344 aa10.27□□□□□ -0.77
RNF4-208ENST00000507247 X6R8D5 127 aa10.27□□□□□ -0.77
RNF4-208ENST00000507247 IGHV1OR15-1A0A075B7D0 117 aa10.26□□□□□ -0.77
RNF4-208ENST00000507247 ZNF705GA8MUZ8 300 aaPredicted RBP10.26□□□□□ -0.77
RNF4-208ENST00000507247 M0R036 132 aa10.26□□□□□ -0.77
RNF4-208ENST00000507247 SPRY2O43597 315 aa10.26□□□□□ -0.77
RNF4-208ENST00000507247 LINC01559Q495D7 138 aa10.26□□□□□ -0.77
RNF4-208ENST00000507247 B9D2Q9BPU9 175 aa10.26□□□□□ -0.77
RNF4-208ENST00000507247 TM2D3Q9BRN9 247 aa10.26□□□□□ -0.77
RNF4-208ENST00000507247 PYGO2Q9BRQ0 406 aa10.26□□□□□ -0.77
RNF4-208ENST00000507247 TP53TG3Q9ULZ0 132 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms