RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 AGPAT4-IT1Q9H0P7 198 aa4.48□□□□□ -1.69
VCAN-207ENST00000507162 SH3BGRL3Q9H299 93 aa4.48□□□□□ -1.69
VCAN-207ENST00000507162 NDUFB11Q9NX14 153 aa4.48□□□□□ -1.69
VCAN-207ENST00000507162 IGHV3-64A0A075B6Q5 118 aa4.47□□□□□ -1.69
VCAN-207ENST00000507162 GAGE12JA6NER3 117 aa4.47□□□□□ -1.69
VCAN-207ENST00000507162 Q0VG73 95 aa4.47□□□□□ -1.69
VCAN-207ENST00000507162 GAGE1Q13065 139 aa4.47□□□□□ -1.69
VCAN-207ENST00000507162 GAGE4Q13068 117 aa4.47□□□□□ -1.69
VCAN-207ENST00000507162 GAGE5Q13069 117 aa4.47□□□□□ -1.69
VCAN-207ENST00000507162 RHOHQ15669 191 aa4.47□□□□□ -1.69
VCAN-207ENST00000507162 GAGE13Q4V321 117 aa4.47□□□□□ -1.69
VCAN-207ENST00000507162 PRR9Q5T870 116 aa4.47□□□□□ -1.69
VCAN-207ENST00000507162 NIT1Q86X76 327 aa4.47□□□□□ -1.69
VCAN-207ENST00000507162 BPIFA4PQ86YQ2 179 aa4.47□□□□□ -1.69
VCAN-207ENST00000507162 OR52I2Q8NH67 350 aa4.47□□□□□ -1.69
VCAN-207ENST00000507162 SRRQ9GZT4 340 aa4.47□□□□□ -1.69
VCAN-207ENST00000507162 DUSP21Q9H596 190 aa4.47□□□□□ -1.69
VCAN-207ENST00000507162 PLAC8Q9NZF1 115 aa4.47□□□□□ -1.69
VCAN-207ENST00000507162 HSPB7Q9UBY9 170 aa4.47□□□□□ -1.69
VCAN-207ENST00000507162 A0A087WX48 190 aa4.46□□□□□ -1.7
VCAN-207ENST00000507162 PGPA6NDG6 321 aa4.46□□□□□ -1.7
VCAN-207ENST00000507162 ANKRD65E5RJM6 399 aa4.46□□□□□ -1.7
VCAN-207ENST00000507162 H3BQ15 152 aa4.46□□□□□ -1.7
VCAN-207ENST00000507162 M0R2P5 195 aa4.46□□□□□ -1.7
VCAN-207ENST00000507162 M0R3E3 92 aa4.46□□□□□ -1.7
VCAN-207ENST00000507162 ZNF253O75346 499 aa4.46□□□□□ -1.7
VCAN-207ENST00000507162 B3GALNT1O75752 331 aa4.46□□□□□ -1.7
VCAN-207ENST00000507162 UBE2MP61081 183 aaKnown RBP4.46□□□□□ -1.7
VCAN-207ENST00000507162 CACNG7P62955 275 aa4.46□□□□□ -1.7
VCAN-207ENST00000507162 SMCO1Q147U7 214 aa4.46□□□□□ -1.7
VCAN-207ENST00000507162 ELOBQ15370 118 aa4.46□□□□□ -1.7
VCAN-207ENST00000507162 BAK1Q16611 211 aa4.46□□□□□ -1.7
VCAN-207ENST00000507162 KCNIP4Q6PIL6 250 aa4.46□□□□□ -1.7
VCAN-207ENST00000507162 LINC00305Q7Z4B0 112 aa4.46□□□□□ -1.7
VCAN-207ENST00000507162 ZNF664Q8N3J9 261 aa4.46□□□□□ -1.7
VCAN-207ENST00000507162 ZFAND2AQ8N6M9 145 aa4.46□□□□□ -1.7
VCAN-207ENST00000507162 PRR26Q8N8Z3 221 aa4.46□□□□□ -1.7
VCAN-207ENST00000507162 OR13C8Q8NGS7 320 aa4.46□□□□□ -1.7
VCAN-207ENST00000507162 MARCH1Q8TCQ1 289 aa4.46□□□□□ -1.7
VCAN-207ENST00000507162 SPACA4Q8TDM5 124 aa4.46□□□□□ -1.7
VCAN-207ENST00000507162 GPX8Q8TED1 209 aa4.46□□□□□ -1.7
VCAN-207ENST00000507162 SAT2Q96F10 170 aaPredicted RBP4.46□□□□□ -1.7
VCAN-207ENST00000507162 FAM19A4Q96LR4 140 aa4.46□□□□□ -1.7
VCAN-207ENST00000507162 KRTAP9-3Q9BYQ3 159 aa4.46□□□□□ -1.7
VCAN-207ENST00000507162 ARV1Q9H2C2 271 aa4.46□□□□□ -1.7
VCAN-207ENST00000507162 C8orf4Q9NR00 106 aa4.46□□□□□ -1.7
VCAN-207ENST00000507162 PSORS1C2Q9UIG4 136 aa4.46□□□□□ -1.7
VCAN-207ENST00000507162 RNF24Q9Y225 148 aa4.46□□□□□ -1.7
VCAN-207ENST00000507162 TRGV11A0A075B6L2 103 aa4.45□□□□□ -1.7
VCAN-207ENST00000507162 MUC21A0A0G2JKD1 596 aa4.45□□□□□ -1.7
VCAN-207ENST00000507162 TRBV6-4A0A1B0GX49 114 aa4.45□□□□□ -1.7
VCAN-207ENST00000507162 C5orf51A6NDU8 294 aa4.45□□□□□ -1.7
VCAN-207ENST00000507162 CCSO14618 274 aa4.45□□□□□ -1.7
VCAN-207ENST00000507162 GNRH2O43555 120 aa4.45□□□□□ -1.7
VCAN-207ENST00000507162 CRISP2P16562 243 aa4.45□□□□□ -1.7
VCAN-207ENST00000507162 AKR1C4P17516 323 aa4.45□□□□□ -1.7
VCAN-207ENST00000507162 CCR6P51684 374 aa4.45□□□□□ -1.7
VCAN-207ENST00000507162 LINC01547P58512 204 aaPredicted RBP4.45□□□□□ -1.7
VCAN-207ENST00000507162 PLP1P60201 277 aa4.45□□□□□ -1.7
VCAN-207ENST00000507162 MAJINQ3KP22 176 aa4.45□□□□□ -1.7
VCAN-207ENST00000507162 SCGB2B2Q4G0G5 96 aa4.45□□□□□ -1.7
VCAN-207ENST00000507162 ATRAIDQ6UW56 229 aa4.45□□□□□ -1.7
VCAN-207ENST00000507162 PRSS48Q7RTY5 328 aa4.45□□□□□ -1.7
VCAN-207ENST00000507162 SNX29P2Q8IUI4 249 aa4.45□□□□□ -1.7
VCAN-207ENST00000507162 PACRGLQ8N7B6 248 aa4.45□□□□□ -1.7
VCAN-207ENST00000507162 Q8TAT8 98 aa4.45□□□□□ -1.7
VCAN-207ENST00000507162 NAGKQ9UJ70 344 aa4.45□□□□□ -1.7
VCAN-207ENST00000507162 A0A087WWC5 75 aa4.44□□□□□ -1.7
VCAN-207ENST00000507162 TMEM262E9PQX1 116 aa4.44□□□□□ -1.7
VCAN-207ENST00000507162 CRPP02741 224 aa4.44□□□□□ -1.7
VCAN-207ENST00000507162 NMBP08949 121 aa4.44□□□□□ -1.7
VCAN-207ENST00000507162 PTTG1IPP53801 180 aa4.44□□□□□ -1.7
VCAN-207ENST00000507162 RPP30P78346 268 aaKnown RBP4.44□□□□□ -1.7
VCAN-207ENST00000507162 RNASE10Q5GAN6 216 aaKnown RBP4.44□□□□□ -1.7
VCAN-207ENST00000507162 SPANXN5Q5MJ07 72 aa4.44□□□□□ -1.7
VCAN-207ENST00000507162 TMEM78Q5T7P6 136 aa4.44□□□□□ -1.7
VCAN-207ENST00000507162 ENHOQ6UWT2 76 aa4.44□□□□□ -1.7
VCAN-207ENST00000507162 FAM159AQ6UWV7 190 aa4.44□□□□□ -1.7
VCAN-207ENST00000507162 LHFPL1Q86WI0 220 aa4.44□□□□□ -1.7
VCAN-207ENST00000507162 CYB561D1Q8N8Q1 229 aa4.44□□□□□ -1.7
VCAN-207ENST00000507162 TMEM75Q8N9X5 138 aa4.44□□□□□ -1.7
VCAN-207ENST00000507162 OR10G9Q8NGN4 311 aa4.44□□□□□ -1.7
VCAN-207ENST00000507162 TERB2Q8NHR7 220 aa4.44□□□□□ -1.7
VCAN-207ENST00000507162 YIPF6Q96EC8 236 aa4.44□□□□□ -1.7
VCAN-207ENST00000507162 NAA60Q9H7X0 242 aa4.44□□□□□ -1.7
VCAN-207ENST00000507162 C14orf166Q9Y224 244 aaKnown RBP4.44□□□□□ -1.7
VCAN-207ENST00000507162 IGKV2-40A0A087WW87 121 aaPredicted RBP4.43□□□□□ -1.7
VCAN-207ENST00000507162 IGKV2-24A0A0C4DH68 120 aa4.43□□□□□ -1.7
VCAN-207ENST00000507162 hDV102S1A0JD36 115 aa4.43□□□□□ -1.7
VCAN-207ENST00000507162 WRBO00258 174 aa4.43□□□□□ -1.7
VCAN-207ENST00000507162 COX7A2P2O60397 106 aa4.43□□□□□ -1.7
VCAN-207ENST00000507162 IGKV2D-40P01614 121 aaPredicted RBP4.43□□□□□ -1.7
VCAN-207ENST00000507162 IGLC2P0DOY2 106 aa4.43□□□□□ -1.7
VCAN-207ENST00000507162 SELENOTP62341 195 aa4.43□□□□□ -1.7
VCAN-207ENST00000507162 UBE2NLQ5JXB2 153 aa4.43□□□□□ -1.7
VCAN-207ENST00000507162 LYZL2Q7Z4W2 148 aa4.43□□□□□ -1.7
VCAN-207ENST00000507162 STPG4Q8N801 248 aa4.43□□□□□ -1.7
VCAN-207ENST00000507162 C15orf54Q8N8G6 183 aa4.43□□□□□ -1.7
VCAN-207ENST00000507162 SAMD12Q8N8I0 201 aa4.43□□□□□ -1.7
VCAN-207ENST00000507162 RAB2BQ8WUD1 216 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms