RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 RNASE8Q8TDE3 154 aaKnown RBP12.98□□□□□ -0.33
NPHP4-210ENST00000506941 SERTM2A0A1B0GWG4 89 aa12.97□□□□□ -0.33
NPHP4-210ENST00000506941 NUPR2A6NF83 97 aa12.97□□□□□ -0.33
NPHP4-210ENST00000506941 CEMP1Q6PRD7 247 aaPredicted RBP12.97□□□□□ -0.33
NPHP4-210ENST00000506941 CYB561D1Q8N8Q1 229 aa12.97□□□□□ -0.33
NPHP4-210ENST00000506941 C16orf74Q96GX8 76 aa12.97□□□□□ -0.33
NPHP4-210ENST00000506941 ATG101Q9BSB4 218 aa12.97□□□□□ -0.33
NPHP4-210ENST00000506941 BOLA1Q9Y3E2 137 aa12.97□□□□□ -0.33
NPHP4-210ENST00000506941 SPART-AS1P0CW21 52 aa12.96□□□□□ -0.33
NPHP4-210ENST00000506941 RAB5CP51148 216 aa12.96□□□□□ -0.33
NPHP4-210ENST00000506941 CCDC28AQ8IWP9 274 aa12.96□□□□□ -0.33
NPHP4-210ENST00000506941 TMEM263Q8WUH6 116 aaKnown RBP12.96□□□□□ -0.33
NPHP4-210ENST00000506941 PYGO2Q9BRQ0 406 aa12.96□□□□□ -0.33
NPHP4-210ENST00000506941 PAGE4O60829 102 aa12.95□□□□□ -0.34
NPHP4-210ENST00000506941 IFNA7P01567 189 aa12.95□□□□□ -0.34
NPHP4-210ENST00000506941 ATP5G3P48201 142 aa12.95□□□□□ -0.34
NPHP4-210ENST00000506941 CCL20P78556 96 aa12.95□□□□□ -0.34
NPHP4-210ENST00000506941 TMEM75Q8N9X5 138 aa12.95□□□□□ -0.34
NPHP4-210ENST00000506941 LINC00479Q96M42 142 aa12.95□□□□□ -0.34
NPHP4-210ENST00000506941 LINC00467Q9BRT7 94 aa12.95□□□□□ -0.34
NPHP4-210ENST00000506941 NKX6-2Q9C056 277 aaPredicted RBP12.95□□□□□ -0.34
NPHP4-210ENST00000506941 ARL2-SNX15V9GYD0 113 aa12.95□□□□□ -0.34
NPHP4-210ENST00000506941 TRAV34A0A0B4J273 112 aa12.94□□□□□ -0.34
NPHP4-210ENST00000506941 F6UZH7 168 aa12.94□□□□□ -0.34
NPHP4-210ENST00000506941 K7EQM0 130 aa12.94□□□□□ -0.34
NPHP4-210ENST00000506941 PEX7O00628 323 aa12.94□□□□□ -0.34
NPHP4-210ENST00000506941 FLI1Q01543 452 aaPredicted RBP12.94□□□□□ -0.34
NPHP4-210ENST00000506941 CST9LP1Q5W188 147 aa12.94□□□□□ -0.34
NPHP4-210ENST00000506941 Q6AWC8 147 aa12.94□□□□□ -0.34
NPHP4-210ENST00000506941 ZNF493Q6ZR52 646 aa12.94□□□□□ -0.34
NPHP4-210ENST00000506941 TREM1Q9NP99 234 aa12.94□□□□□ -0.34
NPHP4-210ENST00000506941 PSG8Q9UQ74 426 aa12.94□□□□□ -0.34
NPHP4-210ENST00000506941 TRAV1-1A0A0B4J248 108 aa12.93□□□□□ -0.34
NPHP4-210ENST00000506941 TEX48A0A1B0GUV7 120 aa12.93□□□□□ -0.34
NPHP4-210ENST00000506941 C8orf49Q96NF6 230 aa12.93□□□□□ -0.34
NPHP4-210ENST00000506941 LYRM9A8MSI8 78 aa12.92□□□□□ -0.34
NPHP4-210ENST00000506941 ALKAL2Q6UX46 152 aa12.92□□□□□ -0.34
NPHP4-210ENST00000506941 PRNTQ86SH4 94 aa12.92□□□□□ -0.34
NPHP4-210ENST00000506941 EIF4E3Q8N5X7 224 aaKnown RBP12.92□□□□□ -0.34
NPHP4-210ENST00000506941 C11orf72Q8NBR9 251 aa12.92□□□□□ -0.34
NPHP4-210ENST00000506941 HIST1H2BAQ96A08 127 aa12.92□□□□□ -0.34
NPHP4-210ENST00000506941 TP53TG3Q9ULZ0 132 aa12.92□□□□□ -0.34
NPHP4-210ENST00000506941 IGHV1OR15-1A0A075B7D0 117 aa12.91□□□□□ -0.34
NPHP4-210ENST00000506941 TRAV10A0A0B4J240 114 aa12.91□□□□□ -0.34
NPHP4-210ENST00000506941 C11orf94C9JXX5 98 aa12.91□□□□□ -0.34
NPHP4-210ENST00000506941 RGS13O14921 159 aa12.91□□□□□ -0.34
NPHP4-210ENST00000506941 ANXA2RQ3ZCQ2 193 aa12.91□□□□□ -0.34
NPHP4-210ENST00000506941 MUC21Q5SSG8 566 aa12.91□□□□□ -0.34
NPHP4-210ENST00000506941 NOP10Q9NPE3 64 aaKnown RBP12.91□□□□□ -0.34
NPHP4-210ENST00000506941 TIMM8BQ9Y5J9 83 aaPredicted RBP12.91□□□□□ -0.34
NPHP4-210ENST00000506941 RYR3Q15413 4870 aa12.91□□□□□ -0.34
NPHP4-210ENST00000506941 CBY3A6NI87 242 aa12.9□□□□□ -0.34
NPHP4-210ENST00000506941 ZNF80P51504 273 aaPredicted RBP12.9□□□□□ -0.34
NPHP4-210ENST00000506941 DAD1P61803 113 aa12.9□□□□□ -0.34
NPHP4-210ENST00000506941 Q86TA4 180 aa12.9□□□□□ -0.34
NPHP4-210ENST00000506941 TCEAL7Q9BRU2 100 aa12.9□□□□□ -0.34
NPHP4-210ENST00000506941 NDFIP1Q9BT67 221 aa12.9□□□□□ -0.34
NPHP4-210ENST00000506941 KLK5Q9Y337 293 aaPredicted RBP12.9□□□□□ -0.34
NPHP4-210ENST00000506941 DEFB131BA0A096LNP1 70 aa12.89□□□□□ -0.35
NPHP4-210ENST00000506941 FBLL1A6NHQ2 334 aaKnown RBP12.89□□□□□ -0.35
NPHP4-210ENST00000506941 DEFB130BP0DP73 79 aa12.89□□□□□ -0.35
NPHP4-210ENST00000506941 DEFB130AP0DP74 79 aa12.89□□□□□ -0.35
NPHP4-210ENST00000506941 PPT1P50897 306 aa12.89□□□□□ -0.35
NPHP4-210ENST00000506941 ZNF680Q8NEM1 530 aa12.89□□□□□ -0.35
NPHP4-210ENST00000506941 C2CD4CQ8TF44 421 aa12.89□□□□□ -0.35
NPHP4-210ENST00000506941 GSN-AS1Q9NRJ2 163 aa12.89□□□□□ -0.35
NPHP4-210ENST00000506941 GNG13Q9P2W3 67 aa12.89□□□□□ -0.35
NPHP4-210ENST00000506941 VPS13DQ5THJ4 4388 aa12.89□□□□□ -0.35
NPHP4-210ENST00000506941 RYR2Q92736 4967 aa12.89□□□□□ -0.35
NPHP4-210ENST00000506941 HYDINQ4G0P3 5121 aa12.88□□□□□ -0.35
NPHP4-210ENST00000506941 SCO2A0A1W2PP80 73 aa12.88□□□□□ -0.35
NPHP4-210ENST00000506941 SNURFLB1AK76 121 aa12.88□□□□□ -0.35
NPHP4-210ENST00000506941 GCGP01275 180 aa12.88□□□□□ -0.35
NPHP4-210ENST00000506941 MANBALQ9NQG1 85 aa12.88□□□□□ -0.35
NPHP4-210ENST00000506941 KLF12Q9Y4X4 402 aa12.88□□□□□ -0.35
NPHP4-210ENST00000506941 TRAV21A0A0B4J279 112 aa12.87□□□□□ -0.35
NPHP4-210ENST00000506941 DAZ2Q13117 558 aaKnown RBP12.87□□□□□ -0.35
NPHP4-210ENST00000506941 LINC00612Q8N6U2 182 aa12.87□□□□□ -0.35
NPHP4-210ENST00000506941 FMC1Q96HJ9 113 aa12.87□□□□□ -0.35
NPHP4-210ENST00000506941 C11orf21Q9P2W6 132 aa12.87□□□□□ -0.35
NPHP4-210ENST00000506941 NAGKQ9UJ70 344 aa12.87□□□□□ -0.35
NPHP4-210ENST00000506941 MUC4Q99102 2169 aa12.86□□□□□ -0.35
NPHP4-210ENST00000506941 IGLL5B9A064 214 aa12.86□□□□□ -0.35
NPHP4-210ENST00000506941 TEX46H3BTG2 121 aa12.86□□□□□ -0.35
NPHP4-210ENST00000506941 HTN3P15516 51 aa12.86□□□□□ -0.35
NPHP4-210ENST00000506941 AKR1C3P42330 323 aa12.86□□□□□ -0.35
NPHP4-210ENST00000506941 TCL1AP56279 114 aa12.86□□□□□ -0.35
NPHP4-210ENST00000506941 TDRG1Q3Y452 100 aa12.86□□□□□ -0.35
NPHP4-210ENST00000506941 SMUG1Q53HV7 270 aa12.86□□□□□ -0.35
NPHP4-210ENST00000506941 SAPCD1Q5SSQ6 148 aa12.86□□□□□ -0.35
NPHP4-210ENST00000506941 IBA57Q5T440 356 aaKnown RBP12.86□□□□□ -0.35
NPHP4-210ENST00000506941 LCE6AA0A183 80 aa12.85□□□□□ -0.35
NPHP4-210ENST00000506941 TMEM183BQ1AE95 376 aa12.85□□□□□ -0.35
NPHP4-210ENST00000506941 FAM159AQ6UWV7 190 aa12.85□□□□□ -0.35
NPHP4-210ENST00000506941 Q6ZTI0 123 aa12.85□□□□□ -0.35
NPHP4-210ENST00000506941 TMEM183AQ8IXX5 376 aa12.85□□□□□ -0.35
NPHP4-210ENST00000506941 MDFICQ9P1T7 246 aa12.85□□□□□ -0.35
NPHP4-210ENST00000506941 NACAE9PAV3 2078 aa12.85□□□□□ -0.35
NPHP4-210ENST00000506941 IGHV4-4A0A075B6R2 117 aa12.84□□□□□ -0.35
NPHP4-210ENST00000506941 TRBV6-1A0A0K0K1D8 114 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms