RNA–Protein interactions for RNA: ENST00000506687.5

CPNE4-207, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-207ENST00000506687 AQP10Q96PS8 301 aa3.59□□□□□ -1.83
CPNE4-207ENST00000506687 GINS3Q9BRX5 216 aa3.59□□□□□ -1.83
CPNE4-207ENST00000506687 RSG1Q9BU20 258 aa3.59□□□□□ -1.83
CPNE4-207ENST00000506687 TMEM147Q9BVK8 224 aa3.59□□□□□ -1.83
CPNE4-207ENST00000506687 UQCC1Q9NVA1 299 aa3.59□□□□□ -1.83
CPNE4-207ENST00000506687 Q9UF83 564 aa3.59□□□□□ -1.83
CPNE4-207ENST00000506687 HSPB11Q9Y547 144 aa3.59□□□□□ -1.83
CPNE4-207ENST00000506687 COX11Q9Y6N1 276 aa3.59□□□□□ -1.83
CPNE4-207ENST00000506687 STARD9Q9P2P6 4700 aa3.58□□□□□ -1.84
CPNE4-207ENST00000506687 IGHV3OR16-13A0A075B7E8 117 aa3.58□□□□□ -1.84
CPNE4-207ENST00000506687 IGHV3-74A0A0B4J1X5 117 aa3.58□□□□□ -1.84
CPNE4-207ENST00000506687 TRAV2A0A0B4J234 112 aa3.58□□□□□ -1.84
CPNE4-207ENST00000506687 KIR2DL5BA0A0G2JN68 375 aa3.58□□□□□ -1.84
CPNE4-207ENST00000506687 KIR2DL5BA0A0G2JPC4 375 aa3.58□□□□□ -1.84
CPNE4-207ENST00000506687 LOC105371267A0A1B0GV96 52 aa3.58□□□□□ -1.84
CPNE4-207ENST00000506687 PAX4O43316 350 aa3.58□□□□□ -1.84
CPNE4-207ENST00000506687 GCGP01275 180 aa3.58□□□□□ -1.84
CPNE4-207ENST00000506687 IFNA7P01567 189 aa3.58□□□□□ -1.84
CPNE4-207ENST00000506687 CD5P06127 495 aa3.58□□□□□ -1.84
CPNE4-207ENST00000506687 FABP1P07148 127 aa3.58□□□□□ -1.84
CPNE4-207ENST00000506687 RBMY1A1P0DJD3 496 aaKnown RBP3.58□□□□□ -1.84
CPNE4-207ENST00000506687 SELENOTP62341 195 aa3.58□□□□□ -1.84
CPNE4-207ENST00000506687 AKR1C1Q04828 323 aa3.58□□□□□ -1.84
CPNE4-207ENST00000506687 TWIST1Q15672 202 aa3.58□□□□□ -1.84
CPNE4-207ENST00000506687 C1orf194Q5T5A4 169 aa3.58□□□□□ -1.84
CPNE4-207ENST00000506687 LCN12Q6JVE5 192 aa3.58□□□□□ -1.84
CPNE4-207ENST00000506687 REG3GQ6UW15 175 aa3.58□□□□□ -1.84
CPNE4-207ENST00000506687 LINC00322Q6ZN03 302 aaPredicted RBP3.58□□□□□ -1.84
CPNE4-207ENST00000506687 KIR2DL5AQ8N109 375 aa3.58□□□□□ -1.84
CPNE4-207ENST00000506687 OR5C1Q8NGR4 320 aa3.58□□□□□ -1.84
CPNE4-207ENST00000506687 OR2T35Q8NGX2 323 aa3.58□□□□□ -1.84
CPNE4-207ENST00000506687 KIR2DL5BQ8NHK3 375 aa3.58□□□□□ -1.84
CPNE4-207ENST00000506687 METTL26Q96S19 204 aa3.58□□□□□ -1.84
CPNE4-207ENST00000506687 GGTLC1Q9BX51 225 aa3.58□□□□□ -1.84
CPNE4-207ENST00000506687 WDR61Q9GZS3 305 aaKnown RBP3.58□□□□□ -1.84
CPNE4-207ENST00000506687 RABAC1Q9UI14 185 aa3.58□□□□□ -1.84
CPNE4-207ENST00000506687 TNFSF18Q9UNG2 199 aa3.58□□□□□ -1.84
CPNE4-207ENST00000506687 SMAD5-AS1Q9Y6J3 95 aa3.58□□□□□ -1.84
CPNE4-207ENST00000506687 AGRNO00468 2067 aa3.58□□□□□ -1.84
CPNE4-207ENST00000506687 HECTD4Q9Y4D8 3996 aa3.57□□□□□ -1.84
CPNE4-207ENST00000506687 IGHV3-66A0A0C4DH42 116 aa3.57□□□□□ -1.84
CPNE4-207ENST00000506687 ZNF98A6NK75 572 aa3.57□□□□□ -1.84
CPNE4-207ENST00000506687 HMSDA8MTL9 139 aa3.57□□□□□ -1.84
CPNE4-207ENST00000506687 H3BRN7 92 aa3.57□□□□□ -1.84
CPNE4-207ENST00000506687 SOCS3O14543 225 aa3.57□□□□□ -1.84
CPNE4-207ENST00000506687 HYPMO75409 117 aa3.57□□□□□ -1.84
CPNE4-207ENST00000506687 CD7P09564 240 aa3.57□□□□□ -1.84
CPNE4-207ENST00000506687 CT45A10P0DMU9 189 aa3.57□□□□□ -1.84
CPNE4-207ENST00000506687 RAB4AP20338 218 aa3.57□□□□□ -1.84
CPNE4-207ENST00000506687 NKX2-5P52952 324 aaPredicted RBP3.57□□□□□ -1.84
CPNE4-207ENST00000506687 LYZP61626 148 aa3.57□□□□□ -1.84
CPNE4-207ENST00000506687 RAB31Q13636 194 aa3.57□□□□□ -1.84
CPNE4-207ENST00000506687 CLINT1Q14677 625 aa3.57□□□□□ -1.84
CPNE4-207ENST00000506687 SMUG1Q53HV7 270 aa3.57□□□□□ -1.84
CPNE4-207ENST00000506687 CLLU1Q5K131 121 aa3.57□□□□□ -1.84
CPNE4-207ENST00000506687 MIC13Q5XKP0 118 aa3.57□□□□□ -1.84
CPNE4-207ENST00000506687 LAMTOR1Q6IAA8 161 aa3.57□□□□□ -1.84
CPNE4-207ENST00000506687 UFSP1Q6NVU6 142 aa3.57□□□□□ -1.84
CPNE4-207ENST00000506687 TCF24Q7RTU0 167 aa3.57□□□□□ -1.84
CPNE4-207ENST00000506687 DYNLRB2Q8TF09 96 aa3.57□□□□□ -1.84
CPNE4-207ENST00000506687 DCANP1Q8TF63 244 aa3.57□□□□□ -1.84
CPNE4-207ENST00000506687 SHANK2-AS3Q9BTD1 123 aa3.57□□□□□ -1.84
CPNE4-207ENST00000506687 NPCDR1Q9BY65 106 aa3.57□□□□□ -1.84
CPNE4-207ENST00000506687 SLC25A39Q9BZJ4 359 aaPredicted RBP3.57□□□□□ -1.84
CPNE4-207ENST00000506687 ARV1Q9H2C2 271 aa3.57□□□□□ -1.84
CPNE4-207ENST00000506687 MS4A6AQ9H2W1 248 aa3.57□□□□□ -1.84
CPNE4-207ENST00000506687 CYTL1Q9NRR1 136 aa3.57□□□□□ -1.84
CPNE4-207ENST00000506687 SLC39A9Q9NUM3 307 aa3.57□□□□□ -1.84
CPNE4-207ENST00000506687 MED9Q9NWA0 146 aa3.57□□□□□ -1.84
CPNE4-207ENST00000506687 RFNGQ9Y644 331 aa3.57□□□□□ -1.84
CPNE4-207ENST00000506687 PLECQ15149 4684 aaKnown RBP3.57□□□□□ -1.84
CPNE4-207ENST00000506687 FXYD6-FXYD2A0A087WZ82 144 aa3.56□□□□□ -1.84
CPNE4-207ENST00000506687 UBE2L5PA0A1B0GUS4 154 aa3.56□□□□□ -1.84
CPNE4-207ENST00000506687 ORM2P19652 201 aa3.56□□□□□ -1.84
CPNE4-207ENST00000506687 CXCL2P19875 107 aa3.56□□□□□ -1.84
CPNE4-207ENST00000506687 FGF7P21781 194 aa3.56□□□□□ -1.84
CPNE4-207ENST00000506687 CEBPGP53567 150 aa3.56□□□□□ -1.84
CPNE4-207ENST00000506687 LINC01547P58512 204 aaPredicted RBP3.56□□□□□ -1.84
CPNE4-207ENST00000506687 RAB14P61106 215 aa3.56□□□□□ -1.84
CPNE4-207ENST00000506687 ZNF726P1Q15940 193 aa3.56□□□□□ -1.84
CPNE4-207ENST00000506687 KRTAP19-4Q3LI73 84 aa3.56□□□□□ -1.84
CPNE4-207ENST00000506687 GCSAMLQ5JQS6 135 aa3.56□□□□□ -1.84
CPNE4-207ENST00000506687 CBLN2Q8IUK8 224 aa3.56□□□□□ -1.84
CPNE4-207ENST00000506687 FAM24BQ8N5W8 94 aa3.56□□□□□ -1.84
CPNE4-207ENST00000506687 FAM167A-AS1Q96KT0 104 aa3.56□□□□□ -1.84
CPNE4-207ENST00000506687 KRTAP4-12Q9BQ66 201 aa3.56□□□□□ -1.84
CPNE4-207ENST00000506687 PBDC1Q9BVG4 233 aa3.56□□□□□ -1.84
CPNE4-207ENST00000506687 SCRT1Q9BWW7 348 aa3.56□□□□□ -1.84
CPNE4-207ENST00000506687 SMIM3Q9BZL3 60 aa3.56□□□□□ -1.84
CPNE4-207ENST00000506687 ARL6Q9H0F7 186 aa3.56□□□□□ -1.84
CPNE4-207ENST00000506687 HIGD1AQ9Y241 93 aa3.56□□□□□ -1.84
CPNE4-207ENST00000506687 PXMP4Q9Y6I8 212 aa3.56□□□□□ -1.84
CPNE4-207ENST00000506687 HUWE1Q7Z6Z7 4374 aaKnown RBP3.56□□□□□ -1.84
CPNE4-207ENST00000506687 TRAV8-2A0A0B4J237 113 aa3.55□□□□□ -1.84
CPNE4-207ENST00000506687 TRAV5A0A0B4J249 113 aa3.55□□□□□ -1.84
CPNE4-207ENST00000506687 OR11H12B2RN74 326 aa3.55□□□□□ -1.84
CPNE4-207ENST00000506687 KRBOX1C9JBD0 128 aa3.55□□□□□ -1.84
CPNE4-207ENST00000506687 OR5G3P0C626 314 aa3.55□□□□□ -1.84
CPNE4-207ENST00000506687 RAB5AP20339 215 aa3.55□□□□□ -1.84
CPNE4-207ENST00000506687 CMC4P56277 68 aaPredicted RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms