RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 PYGO2Q9BRQ0 406 aa9.33□□□□□ -0.92
TCOF1-209ENST00000506630 IGHV4-4A0A075B6R2 117 aa9.32□□□□□ -0.92
TCOF1-209ENST00000506630 TRBV7-9A0A0J9YWB2 115 aa9.32□□□□□ -0.92
TCOF1-209ENST00000506630 MAP1LC3B2A6NCE7 125 aa9.32□□□□□ -0.92
TCOF1-209ENST00000506630 NMBP08949 121 aa9.32□□□□□ -0.92
TCOF1-209ENST00000506630 EIF5AP63241 154 aaKnown RBP9.32□□□□□ -0.92
TCOF1-209ENST00000506630 AKAP14Q86UN6 197 aa9.32□□□□□ -0.92
TCOF1-209ENST00000506630 C5orf17Q8NAS9 161 aa9.32□□□□□ -0.92
TCOF1-209ENST00000506630 MAP1LC3BQ9GZQ8 125 aa9.32□□□□□ -0.92
TCOF1-209ENST00000506630 TMPRSS5Q9H3S3 457 aa9.32□□□□□ -0.92
TCOF1-209ENST00000506630 TIMM8BQ9Y5J9 83 aaPredicted RBP9.32□□□□□ -0.92
TCOF1-209ENST00000506630 TRAV8-1A0A0A6YYK1 113 aa9.31□□□□□ -0.92
TCOF1-209ENST00000506630 CBY3A6NI87 242 aa9.31□□□□□ -0.92
TCOF1-209ENST00000506630 SNURFLB1AK76 121 aa9.31□□□□□ -0.92
TCOF1-209ENST00000506630 GGTLC3B5MD39 225 aa9.31□□□□□ -0.92
TCOF1-209ENST00000506630 RGS13O14921 159 aa9.31□□□□□ -0.92
TCOF1-209ENST00000506630 ZNF324O75467 553 aaPredicted RBP9.31□□□□□ -0.92
TCOF1-209ENST00000506630 SEC11BP0C7V7 166 aa9.31□□□□□ -0.92
TCOF1-209ENST00000506630 DEFB130BP0DP73 79 aa9.31□□□□□ -0.92
TCOF1-209ENST00000506630 DEFB130AP0DP74 79 aa9.31□□□□□ -0.92
TCOF1-209ENST00000506630 TPT1P13693 172 aaKnown RBP9.31□□□□□ -0.92
TCOF1-209ENST00000506630 TCTAP57738 103 aa9.31□□□□□ -0.92
TCOF1-209ENST00000506630 UBE2G2P60604 165 aa9.31□□□□□ -0.92
TCOF1-209ENST00000506630 ARL6IP6Q8N6S5 226 aa9.31□□□□□ -0.92
TCOF1-209ENST00000506630 TMED6Q8WW62 240 aa9.31□□□□□ -0.92
TCOF1-209ENST00000506630 NOP10Q9NPE3 64 aaKnown RBP9.31□□□□□ -0.92
TCOF1-209ENST00000506630 SERTM2A0A1B0GWG4 89 aa9.3□□□□□ -0.92
TCOF1-209ENST00000506630 A0A1W2PRE2 83 aa9.3□□□□□ -0.92
TCOF1-209ENST00000506630 K7EQM0 130 aa9.3□□□□□ -0.92
TCOF1-209ENST00000506630 TCRAP04437 139 aa9.3□□□□□ -0.92
TCOF1-209ENST00000506630 FHITP49789 147 aa9.3□□□□□ -0.92
TCOF1-209ENST00000506630 SUMO1P63165 101 aaKnown RBP9.3□□□□□ -0.92
TCOF1-209ENST00000506630 Q6ZQT7 251 aa9.3□□□□□ -0.92
TCOF1-209ENST00000506630 EIF4E3Q8N5X7 224 aaKnown RBP9.3□□□□□ -0.92
TCOF1-209ENST00000506630 FAM213BQ8TBF2 198 aa9.3□□□□□ -0.92
TCOF1-209ENST00000506630 SGK494Q96LW2 274 aa9.3□□□□□ -0.92
TCOF1-209ENST00000506630 LENEPQ9Y5L5 61 aa9.3□□□□□ -0.92
TCOF1-209ENST00000506630 C1QBP02746 253 aa9.29□□□□□ -0.92
TCOF1-209ENST00000506630 ZNF680Q8NEM1 530 aa9.29□□□□□ -0.92
TCOF1-209ENST00000506630 STOML3Q8TAV4 291 aa9.29□□□□□ -0.92
TCOF1-209ENST00000506630 NDFIP1Q9BT67 221 aa9.29□□□□□ -0.92
TCOF1-209ENST00000506630 TREM1Q9NP99 234 aa9.29□□□□□ -0.92
TCOF1-209ENST00000506630 APLNQ9ULZ1 77 aa9.29□□□□□ -0.92
TCOF1-209ENST00000506630 EPDR1Q9UM22 224 aa9.29□□□□□ -0.92
TCOF1-209ENST00000506630 PCLOQ9Y6V0 5065 aa9.29□□□□□ -0.92
TCOF1-209ENST00000506630 IGHV1OR15-1A0A075B7D0 117 aa9.28□□□□□ -0.92
TCOF1-209ENST00000506630 A0A1B0GV50 99 aa9.28□□□□□ -0.92
TCOF1-209ENST00000506630 UMAD1C9J7I0 102 aa9.28□□□□□ -0.92
TCOF1-209ENST00000506630 F6UZH7 168 aa9.28□□□□□ -0.92
TCOF1-209ENST00000506630 IFNA7P01567 189 aa9.28□□□□□ -0.92
TCOF1-209ENST00000506630 ANXA2RQ3ZCQ2 193 aa9.28□□□□□ -0.92
TCOF1-209ENST00000506630 LGALSLQ3ZCW2 172 aaPredicted RBP9.28□□□□□ -0.92
TCOF1-209ENST00000506630 MUC21Q5SSG8 566 aa9.28□□□□□ -0.92
TCOF1-209ENST00000506630 CYB561D1Q8N8Q1 229 aa9.28□□□□□ -0.92
TCOF1-209ENST00000506630 LINC00467Q9BRT7 94 aa9.28□□□□□ -0.92
TCOF1-209ENST00000506630 NDUFAF3Q9BU61 184 aa9.28□□□□□ -0.92
TCOF1-209ENST00000506630 MUC4Q99102 2169 aa9.27□□□□□ -0.92
TCOF1-209ENST00000506630 FAM74A7A6NL05 159 aa9.27□□□□□ -0.93
TCOF1-209ENST00000506630 Q6AWC8 147 aa9.27□□□□□ -0.93
TCOF1-209ENST00000506630 LINC00336Q6ZUF6 198 aa9.27□□□□□ -0.93
TCOF1-209ENST00000506630 TMEM75Q8N9X5 138 aa9.27□□□□□ -0.93
TCOF1-209ENST00000506630 TVP23CQ96ET8 276 aa9.27□□□□□ -0.93
TCOF1-209ENST00000506630 ATG101Q9BSB4 218 aa9.27□□□□□ -0.93
TCOF1-209ENST00000506630 GSN-AS1Q9NRJ2 163 aa9.27□□□□□ -0.93
TCOF1-209ENST00000506630 NAGKQ9UJ70 344 aa9.27□□□□□ -0.93
TCOF1-209ENST00000506630 TP53TG3Q9ULZ0 132 aa9.27□□□□□ -0.93
TCOF1-209ENST00000506630 NACAE9PAV3 2078 aa9.27□□□□□ -0.93
TCOF1-209ENST00000506630 GAGE12BA1L429 117 aa9.26□□□□□ -0.93
TCOF1-209ENST00000506630 F5H768 121 aa9.26□□□□□ -0.93
TCOF1-209ENST00000506630 GAGE7O76087 117 aa9.26□□□□□ -0.93
TCOF1-209ENST00000506630 ATP5G1P05496 136 aa9.26□□□□□ -0.93
TCOF1-209ENST00000506630 GAGE12FP0CL80 117 aa9.26□□□□□ -0.93
TCOF1-209ENST00000506630 GAGE12GP0CL81 117 aa9.26□□□□□ -0.93
TCOF1-209ENST00000506630 GAGE12IP0CL82 117 aa9.26□□□□□ -0.93
TCOF1-209ENST00000506630 MED14OSP0DP75 135 aa9.26□□□□□ -0.93
TCOF1-209ENST00000506630 ATP5G3P48201 142 aa9.26□□□□□ -0.93
TCOF1-209ENST00000506630 FLI1Q01543 452 aaPredicted RBP9.26□□□□□ -0.93
TCOF1-209ENST00000506630 DPPA3Q6W0C5 159 aa9.26□□□□□ -0.93
TCOF1-209ENST00000506630 PRNTQ86SH4 94 aa9.26□□□□□ -0.93
TCOF1-209ENST00000506630 C11orf72Q8NBR9 251 aa9.26□□□□□ -0.93
TCOF1-209ENST00000506630 SFT2D1Q8WV19 159 aa9.26□□□□□ -0.93
TCOF1-209ENST00000506630 NKX6-2Q9C056 277 aaPredicted RBP9.26□□□□□ -0.93
TCOF1-209ENST00000506630 PSG8Q9UQ74 426 aa9.26□□□□□ -0.93
TCOF1-209ENST00000506630 DNAH2Q9P225 4427 aa9.25□□□□□ -0.93
TCOF1-209ENST00000506630 TRGV1A0A0A0MS02 117 aa9.25□□□□□ -0.93
TCOF1-209ENST00000506630 TRAV21A0A0B4J279 112 aa9.25□□□□□ -0.93
TCOF1-209ENST00000506630 A0A1B0GVG6 124 aa9.25□□□□□ -0.93
TCOF1-209ENST00000506630 PEX7O00628 323 aa9.25□□□□□ -0.93
TCOF1-209ENST00000506630 ZNF415Q09FC8 603 aa9.25□□□□□ -0.93
TCOF1-209ENST00000506630 DAZ2Q13117 558 aaKnown RBP9.25□□□□□ -0.93
TCOF1-209ENST00000506630 ZFP69Q49AA0 526 aa9.25□□□□□ -0.93
TCOF1-209ENST00000506630 IBA57Q5T440 356 aaKnown RBP9.25□□□□□ -0.93
TCOF1-209ENST00000506630 CST9LP1Q5W188 147 aa9.25□□□□□ -0.93
TCOF1-209ENST00000506630 EIF5AL1Q6IS14 154 aaKnown RBP9.25□□□□□ -0.93
TCOF1-209ENST00000506630 TMEM88Q6PEY1 159 aa9.25□□□□□ -0.93
TCOF1-209ENST00000506630 FAM159AQ6UWV7 190 aa9.25□□□□□ -0.93
TCOF1-209ENST00000506630 MBD3L1Q8WWY6 194 aa9.25□□□□□ -0.93
TCOF1-209ENST00000506630 FAM210BQ96KR6 192 aa9.25□□□□□ -0.93
TCOF1-209ENST00000506630 C8orf49Q96NF6 230 aa9.25□□□□□ -0.93
TCOF1-209ENST00000506630 TRAV34A0A0B4J273 112 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms