RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 MGST2Q99735 147 aa2.09□□□□□ -2.07
TCOF1-208ENST00000506063 MARVELD1Q9BSK0 173 aa2.09□□□□□ -2.07
TCOF1-208ENST00000506063 RSG1Q9BU20 258 aa2.09□□□□□ -2.07
TCOF1-208ENST00000506063 NPCDR1Q9BY65 106 aa2.09□□□□□ -2.07
TCOF1-208ENST00000506063 SAV1Q9H4B6 383 aaPredicted RBP2.09□□□□□ -2.07
TCOF1-208ENST00000506063 DPH3P1Q9H4G8 78 aa2.09□□□□□ -2.07
TCOF1-208ENST00000506063 SLC39A9Q9NUM3 307 aa2.09□□□□□ -2.07
TCOF1-208ENST00000506063 WDR83OSQ9Y284 106 aa2.09□□□□□ -2.07
TCOF1-208ENST00000506063 HSPB11Q9Y547 144 aa2.09□□□□□ -2.07
TCOF1-208ENST00000506063 ALG5Q9Y673 324 aa2.09□□□□□ -2.07
TCOF1-208ENST00000506063 U3KQE9 123 aa2.09□□□□□ -2.07
TCOF1-208ENST00000506063 BORCS7-ASMTA0A0B4J1R7 106 aa2.08□□□□□ -2.08
TCOF1-208ENST00000506063 A0A1W2PPV4 95 aa2.08□□□□□ -2.08
TCOF1-208ENST00000506063 PMS2P5A8MQ11 134 aa2.08□□□□□ -2.08
TCOF1-208ENST00000506063 SOCS3O14543 225 aa2.08□□□□□ -2.08
TCOF1-208ENST00000506063 ZNF253O75346 499 aa2.08□□□□□ -2.08
TCOF1-208ENST00000506063 MPC2O95563 127 aa2.08□□□□□ -2.08
TCOF1-208ENST00000506063 GIPP09681 153 aaPredicted RBP2.08□□□□□ -2.08
TCOF1-208ENST00000506063 HIST1H1EP10412 219 aaKnown RBP2.08□□□□□ -2.08
TCOF1-208ENST00000506063 RPL12P30050 165 aaKnown RBP2.08□□□□□ -2.08
TCOF1-208ENST00000506063 LEPP41159 167 aa2.08□□□□□ -2.08
TCOF1-208ENST00000506063 CSN1S1P47710 185 aa2.08□□□□□ -2.08
TCOF1-208ENST00000506063 RPL29P47914 159 aaKnown RBP2.08□□□□□ -2.08
TCOF1-208ENST00000506063 CNN1P51911 297 aaKnown RBP2.08□□□□□ -2.08
TCOF1-208ENST00000506063 PAX9P55771 341 aa2.08□□□□□ -2.08
TCOF1-208ENST00000506063 H2BFSP57053 126 aa2.08□□□□□ -2.08
TCOF1-208ENST00000506063 PSG9Q00887 426 aa2.08□□□□□ -2.08
TCOF1-208ENST00000506063 SRSF9Q13242 221 aaKnown RBP eCLIP2.08□□□□□ -2.08
TCOF1-208ENST00000506063 PDE6HQ13956 83 aa2.08□□□□□ -2.08
TCOF1-208ENST00000506063 CIRBPQ14011 172 aaKnown RBP2.08□□□□□ -2.08
TCOF1-208ENST00000506063 PRR4Q16378 134 aa2.08□□□□□ -2.08
TCOF1-208ENST00000506063 VWC2Q2TAL6 325 aa2.08□□□□□ -2.08
TCOF1-208ENST00000506063 FFAR4Q5NUL3 377 aa2.08□□□□□ -2.08
TCOF1-208ENST00000506063 FAM74A1Q5RGS3 127 aa2.08□□□□□ -2.08
TCOF1-208ENST00000506063 FAM78BQ5VT40 261 aa2.08□□□□□ -2.08
TCOF1-208ENST00000506063 MIC13Q5XKP0 118 aa2.08□□□□□ -2.08
TCOF1-208ENST00000506063 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.08□□□□□ -2.08
TCOF1-208ENST00000506063 KRTAP19-1Q8IUB9 90 aa2.08□□□□□ -2.08
TCOF1-208ENST00000506063 IQCF2Q8IXL9 164 aa2.08□□□□□ -2.08
TCOF1-208ENST00000506063 TMEM256Q8N2U0 113 aa2.08□□□□□ -2.08
TCOF1-208ENST00000506063 RNF182Q8N6D2 247 aa2.08□□□□□ -2.08
TCOF1-208ENST00000506063 HSD17B11Q8NBQ5 300 aa2.08□□□□□ -2.08
TCOF1-208ENST00000506063 CMTM2Q8TAZ6 248 aa2.08□□□□□ -2.08
TCOF1-208ENST00000506063 RNASE8Q8TDE3 154 aaKnown RBP2.08□□□□□ -2.08
TCOF1-208ENST00000506063 TMEM37Q8WXS4 190 aa2.08□□□□□ -2.08
TCOF1-208ENST00000506063 MRPL53Q96EL3 112 aaKnown RBP2.08□□□□□ -2.08
TCOF1-208ENST00000506063 IGF2BP2-AS1Q96M15 143 aa2.08□□□□□ -2.08
TCOF1-208ENST00000506063 SMIM3Q9BZL3 60 aa2.08□□□□□ -2.08
TCOF1-208ENST00000506063 WDR61Q9GZS3 305 aaKnown RBP2.08□□□□□ -2.08
TCOF1-208ENST00000506063 TMPRSS5Q9H3S3 457 aa2.08□□□□□ -2.08
TCOF1-208ENST00000506063 OR5AC2Q9NZP5 309 aa2.08□□□□□ -2.08
TCOF1-208ENST00000506063 PRELID1Q9Y255 219 aa2.08□□□□□ -2.08
TCOF1-208ENST00000506063 TIMM9Q9Y5J7 89 aa2.08□□□□□ -2.08
TCOF1-208ENST00000506063 KIF25-AS1Q9Y6Z4 181 aa2.08□□□□□ -2.08
TCOF1-208ENST00000506063 TRAV5A0A0B4J249 113 aa2.07□□□□□ -2.08
TCOF1-208ENST00000506063 A0A0D9SG52 128 aa2.07□□□□□ -2.08
TCOF1-208ENST00000506063 A0A0J9YX75 114 aa2.07□□□□□ -2.08
TCOF1-208ENST00000506063 KANTRA0A1W2PQU2 76 aa2.07□□□□□ -2.08
TCOF1-208ENST00000506063 RNF222A6NCQ9 220 aa2.07□□□□□ -2.08
TCOF1-208ENST00000506063 F6UB75 175 aa2.07□□□□□ -2.08
TCOF1-208ENST00000506063 K7EQM0 130 aa2.07□□□□□ -2.08
TCOF1-208ENST00000506063 M0R2Z0 102 aa2.07□□□□□ -2.08
TCOF1-208ENST00000506063 SLC17A3O00476 420 aa2.07□□□□□ -2.08
TCOF1-208ENST00000506063 PFDN1O60925 122 aa2.07□□□□□ -2.08
TCOF1-208ENST00000506063 MBP02144 154 aa2.07□□□□□ -2.08
TCOF1-208ENST00000506063 IGLC2P0DOY2 106 aa2.07□□□□□ -2.08
TCOF1-208ENST00000506063 CXCL3P19876 107 aa2.07□□□□□ -2.08
TCOF1-208ENST00000506063 EVI2AP22794 236 aa2.07□□□□□ -2.08
TCOF1-208ENST00000506063 CDC34P49427 236 aaPredicted RBP2.07□□□□□ -2.08
TCOF1-208ENST00000506063 PRR3P79522 188 aaKnown RBP2.07□□□□□ -2.08
TCOF1-208ENST00000506063 IFITM3Q01628 133 aa2.07□□□□□ -2.08
TCOF1-208ENST00000506063 ARL16Q0P5N6 197 aa2.07□□□□□ -2.08
TCOF1-208ENST00000506063 SPINK13Q1W4C9 94 aa2.07□□□□□ -2.08
TCOF1-208ENST00000506063 TDRG1Q3Y452 100 aa2.07□□□□□ -2.08
TCOF1-208ENST00000506063 ZFP69Q49AA0 526 aa2.07□□□□□ -2.08
TCOF1-208ENST00000506063 AKR1C8PQ5T2L2 129 aa2.07□□□□□ -2.08
TCOF1-208ENST00000506063 TMEM78Q5T7P6 136 aa2.07□□□□□ -2.08
TCOF1-208ENST00000506063 MORN5Q5VZ52 161 aa2.07□□□□□ -2.08
TCOF1-208ENST00000506063 PQLC2Q6ZP29 291 aa2.07□□□□□ -2.08
TCOF1-208ENST00000506063 C9orf47Q6ZRZ4 202 aa2.07□□□□□ -2.08
TCOF1-208ENST00000506063 CCDC28AQ8IWP9 274 aa2.07□□□□□ -2.08
TCOF1-208ENST00000506063 BAP18Q8IXM2 172 aa2.07□□□□□ -2.08
TCOF1-208ENST00000506063 C10orf126Q8N4M7 172 aa2.07□□□□□ -2.08
TCOF1-208ENST00000506063 ZNF680Q8NEM1 530 aa2.07□□□□□ -2.08
TCOF1-208ENST00000506063 OR11H7Q8NGC8 314 aa2.07□□□□□ -2.08
TCOF1-208ENST00000506063 OR8A1Q8NGG7 326 aa2.07□□□□□ -2.08
TCOF1-208ENST00000506063 OR2T35Q8NGX2 323 aa2.07□□□□□ -2.08
TCOF1-208ENST00000506063 BLNKQ8WV28 456 aa2.07□□□□□ -2.08
TCOF1-208ENST00000506063 RPUSD4Q96CM3 377 aaKnown RBP2.07□□□□□ -2.08
TCOF1-208ENST00000506063 C16orf74Q96GX8 76 aa2.07□□□□□ -2.08
TCOF1-208ENST00000506063 AQP10Q96PS8 301 aa2.07□□□□□ -2.08
TCOF1-208ENST00000506063 ODF3Q96PU9 254 aa2.07□□□□□ -2.08
TCOF1-208ENST00000506063 ARPC5LQ9BPX5 153 aa2.07□□□□□ -2.08
TCOF1-208ENST00000506063 C20orf144Q9BQM9 153 aa2.07□□□□□ -2.08
TCOF1-208ENST00000506063 NDFIP1Q9BT67 221 aa2.07□□□□□ -2.08
TCOF1-208ENST00000506063 PSMG3Q9BT73 122 aaPredicted RBP2.07□□□□□ -2.08
TCOF1-208ENST00000506063 PARD6GQ9BYG4 376 aaPredicted RBP2.07□□□□□ -2.08
TCOF1-208ENST00000506063 C11orf1Q9H5F2 150 aa2.07□□□□□ -2.08
TCOF1-208ENST00000506063 Q9HAA7 133 aa2.07□□□□□ -2.08
TCOF1-208ENST00000506063 NOP10Q9NPE3 64 aaKnown RBP2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms