RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 RNASE11Q8TAA1 199 aaKnown RBP4.51□□□□□ -1.69
VCAN-206ENST00000505615 BLNKQ8WV28 456 aa4.51□□□□□ -1.69
VCAN-206ENST00000505615 RBPMSQ93062 196 aaKnown RBP4.51□□□□□ -1.69
VCAN-206ENST00000505615 ZNF486Q96H40 463 aaPredicted RBP4.51□□□□□ -1.69
VCAN-206ENST00000505615 SLC35E1Q96K37 410 aa4.51□□□□□ -1.69
VCAN-206ENST00000505615 PAXXQ9BUH6 204 aa4.51□□□□□ -1.69
VCAN-206ENST00000505615 MRPL32Q9BYC8 188 aaKnown RBP4.51□□□□□ -1.69
VCAN-206ENST00000505615 MRPL16Q9NX20 251 aaKnown RBP4.51□□□□□ -1.69
VCAN-206ENST00000505615 TPRKBQ9Y3C4 175 aa4.51□□□□□ -1.69
VCAN-206ENST00000505615 PRAC2D3DTV9 90 aa4.5□□□□□ -1.69
VCAN-206ENST00000505615 RCVRNP35243 200 aa4.5□□□□□ -1.69
VCAN-206ENST00000505615 UBE2G2P60604 165 aa4.5□□□□□ -1.69
VCAN-206ENST00000505615 LAGE3Q14657 143 aa4.5□□□□□ -1.69
VCAN-206ENST00000505615 C9orf47Q6ZRZ4 202 aa4.5□□□□□ -1.69
VCAN-206ENST00000505615 LGI3Q8N145 548 aa4.5□□□□□ -1.69
VCAN-206ENST00000505615 ZNF431Q8TF32 576 aaPredicted RBP4.5□□□□□ -1.69
VCAN-206ENST00000505615 TMEM56-RWDD3S4R434 201 aa4.5□□□□□ -1.69
VCAN-206ENST00000505615 U3KQ87 197 aa4.5□□□□□ -1.69
VCAN-206ENST00000505615 LOC100131303A0A0U1RQF7 123 aa4.49□□□□□ -1.69
VCAN-206ENST00000505615 RBFOX3A6NFN3 312 aa4.49□□□□□ -1.69
VCAN-206ENST00000505615 FAM74A7A6NL05 159 aa4.49□□□□□ -1.69
VCAN-206ENST00000505615 GABARAPH6UMI1 98 aa4.49□□□□□ -1.69
VCAN-206ENST00000505615 MRPS12O15235 138 aaKnown RBP4.49□□□□□ -1.69
VCAN-206ENST00000505615 GABARAPO95166 117 aa4.49□□□□□ -1.69
VCAN-206ENST00000505615 CDS2O95674 445 aa4.49□□□□□ -1.69
VCAN-206ENST00000505615 CFDP00746 253 aaPredicted RBP4.49□□□□□ -1.69
VCAN-206ENST00000505615 IGHV3-30P01768 117 aa4.49□□□□□ -1.69
VCAN-206ENST00000505615 IGHV3-33P01772 117 aa4.49□□□□□ -1.69
VCAN-206ENST00000505615 SFTA3P0C7M3 94 aa4.49□□□□□ -1.69
VCAN-206ENST00000505615 CT45A10P0DMU9 189 aa4.49□□□□□ -1.69
VCAN-206ENST00000505615 IGHV3-30-3P0DP02 117 aa4.49□□□□□ -1.69
VCAN-206ENST00000505615 IGHV3-30-5P0DP03 117 aa4.49□□□□□ -1.69
VCAN-206ENST00000505615 ORM2P19652 201 aa4.49□□□□□ -1.69
VCAN-206ENST00000505615 CDC34P49427 236 aaPredicted RBP4.49□□□□□ -1.69
VCAN-206ENST00000505615 MXD1Q05195 221 aa4.49□□□□□ -1.69
VCAN-206ENST00000505615 ZNF846Q147U1 533 aa4.49□□□□□ -1.69
VCAN-206ENST00000505615 FAM74A3Q4VXF1 159 aa4.49□□□□□ -1.69
VCAN-206ENST00000505615 INO80EQ8NBZ0 244 aaPredicted RBP4.49□□□□□ -1.69
VCAN-206ENST00000505615 BAALCQ8WXS3 180 aa4.49□□□□□ -1.69
VCAN-206ENST00000505615 ODF3Q96PU9 254 aa4.49□□□□□ -1.69
VCAN-206ENST00000505615 SHANK2-AS3Q9BTD1 123 aa4.49□□□□□ -1.69
VCAN-206ENST00000505615 TMEM147Q9BVK8 224 aa4.49□□□□□ -1.69
VCAN-206ENST00000505615 TMEM222Q9H0R3 208 aa4.49□□□□□ -1.69
VCAN-206ENST00000505615 TRGV4A0A0C4DH28 118 aa4.48□□□□□ -1.69
VCAN-206ENST00000505615 TEX13DA0A0J9YY54 714 aaPredicted RBP4.48□□□□□ -1.69
VCAN-206ENST00000505615 A0A1B0GW15 77 aa4.48□□□□□ -1.69
VCAN-206ENST00000505615 C7orf71A4D174 169 aa4.48□□□□□ -1.69
VCAN-206ENST00000505615 ORM1P02763 201 aa4.48□□□□□ -1.69
VCAN-206ENST00000505615 RPL7P18124 248 aaKnown RBP4.48□□□□□ -1.69
VCAN-206ENST00000505615 PRSS3P35030 304 aa4.48□□□□□ -1.69
VCAN-206ENST00000505615 LEPP41159 167 aa4.48□□□□□ -1.69
VCAN-206ENST00000505615 LRRC37A5PQ49AS3 106 aa4.48□□□□□ -1.69
VCAN-206ENST00000505615 SMUG1Q53HV7 270 aa4.48□□□□□ -1.69
VCAN-206ENST00000505615 IBA57Q5T440 356 aaKnown RBP4.48□□□□□ -1.69
VCAN-206ENST00000505615 GPR107Q5VW38 600 aa4.48□□□□□ -1.69
VCAN-206ENST00000505615 Q6ZNX1 250 aa4.48□□□□□ -1.69
VCAN-206ENST00000505615 Q6ZRG5 221 aa4.48□□□□□ -1.69
VCAN-206ENST00000505615 LINC00518Q8N0U6 118 aa4.48□□□□□ -1.69
VCAN-206ENST00000505615 EIF4E3Q8N5X7 224 aaKnown RBP4.48□□□□□ -1.69
VCAN-206ENST00000505615 DTD1Q8TEA8 209 aa4.48□□□□□ -1.69
VCAN-206ENST00000505615 PCNPQ8WW12 178 aaKnown RBP4.48□□□□□ -1.69
VCAN-206ENST00000505615 LINC01600Q96MT4 127 aa4.48□□□□□ -1.69
VCAN-206ENST00000505615 TXNDC17Q9BRA2 123 aa4.48□□□□□ -1.69
VCAN-206ENST00000505615 RBKSQ9H477 322 aa4.48□□□□□ -1.69
VCAN-206ENST00000505615 ZNF331Q9NQX6 463 aaPredicted RBP4.48□□□□□ -1.69
VCAN-206ENST00000505615 NAGKQ9UJ70 344 aa4.48□□□□□ -1.69
VCAN-206ENST00000505615 TP53TG3Q9ULZ0 132 aa4.48□□□□□ -1.69
VCAN-206ENST00000505615 SLC17A3O00476 420 aa4.47□□□□□ -1.69
VCAN-206ENST00000505615 CXCL2P19875 107 aa4.47□□□□□ -1.69
VCAN-206ENST00000505615 PAPPA-AS1Q5QFB9 102 aa4.47□□□□□ -1.69
VCAN-206ENST00000505615 PIK3CD-AS1Q5SR53 167 aa4.47□□□□□ -1.69
VCAN-206ENST00000505615 STEAP1BQ6NZ63 245 aa4.47□□□□□ -1.69
VCAN-206ENST00000505615 OR10G4Q8NGN3 311 aa4.47□□□□□ -1.69
VCAN-206ENST00000505615 OR13C8Q8NGS7 320 aa4.47□□□□□ -1.69
VCAN-206ENST00000505615 COPZ2Q9P299 210 aa4.47□□□□□ -1.69
VCAN-206ENST00000505615 GAGE12JA6NER3 117 aa4.46□□□□□ -1.7
VCAN-206ENST00000505615 KLLNB2CW77 178 aa4.46□□□□□ -1.7
VCAN-206ENST00000505615 PANO1I0J062 215 aa4.46□□□□□ -1.7
VCAN-206ENST00000505615 HSBP1O75506 76 aa4.46□□□□□ -1.7
VCAN-206ENST00000505615 SULT1A3P0DMM9 295 aa4.46□□□□□ -1.7
VCAN-206ENST00000505615 SULT1A4P0DMN0 295 aa4.46□□□□□ -1.7
VCAN-206ENST00000505615 PMCHP20382 165 aa4.46□□□□□ -1.7
VCAN-206ENST00000505615 BLOC1S1P78537 153 aa4.46□□□□□ -1.7
VCAN-206ENST00000505615 CD300CQ08708 224 aa4.46□□□□□ -1.7
VCAN-206ENST00000505615 BTN1A1Q13410 526 aa4.46□□□□□ -1.7
VCAN-206ENST00000505615 C5orf47Q569G3 176 aa4.46□□□□□ -1.7
VCAN-206ENST00000505615 UBE2NLQ5JXB2 153 aa4.46□□□□□ -1.7
VCAN-206ENST00000505615 LCE1AQ5T7P2 110 aa4.46□□□□□ -1.7
VCAN-206ENST00000505615 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.46□□□□□ -1.7
VCAN-206ENST00000505615 Q6ZQT7 251 aa4.46□□□□□ -1.7
VCAN-206ENST00000505615 Q8N976 141 aa4.46□□□□□ -1.7
VCAN-206ENST00000505615 CCDC71LQ8N9Z2 235 aa4.46□□□□□ -1.7
VCAN-206ENST00000505615 OR1S1Q8NH92 325 aa4.46□□□□□ -1.7
VCAN-206ENST00000505615 S100A16Q96FQ6 103 aaKnown RBP4.46□□□□□ -1.7
VCAN-206ENST00000505615 SLC25A31Q9H0C2 315 aa4.46□□□□□ -1.7
VCAN-206ENST00000505615 SSR3Q9UNL2 185 aa4.46□□□□□ -1.7
VCAN-206ENST00000505615 HIGD1AQ9Y241 93 aa4.46□□□□□ -1.7
VCAN-206ENST00000505615 TRAV8-6A0A0B4J262 113 aa4.45□□□□□ -1.7
VCAN-206ENST00000505615 PMS2P5A8MQ11 134 aa4.45□□□□□ -1.7
VCAN-206ENST00000505615 CENPXA8MT69 81 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms