RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 NMES1Q9C002 83 aa11.02□□□□□ -0.65
PDLIM7-213ENST00000505074 WDR61Q9GZS3 305 aaKnown RBP11.02□□□□□ -0.65
PDLIM7-213ENST00000505074 ICOSQ9Y6W8 199 aa11.02□□□□□ -0.65
PDLIM7-213ENST00000505074 FAT1Q14517 4588 aa11.01□□□□□ -0.65
PDLIM7-213ENST00000505074 SRRM2Q9UQ35 2752 aaKnown RBP11.01□□□□□ -0.65
PDLIM7-213ENST00000505074 A0A1W2PPQ1 181 aa11.01□□□□□ -0.65
PDLIM7-213ENST00000505074 SPINK4O60575 86 aa11.01□□□□□ -0.65
PDLIM7-213ENST00000505074 ZNF138P52744 262 aa11.01□□□□□ -0.65
PDLIM7-213ENST00000505074 UBE2L3P68036 154 aaKnown RBP11.01□□□□□ -0.65
PDLIM7-213ENST00000505074 ZNF415Q09FC8 603 aa11.01□□□□□ -0.65
PDLIM7-213ENST00000505074 IBA57Q5T440 356 aaKnown RBP11.01□□□□□ -0.65
PDLIM7-213ENST00000505074 ZFAND2AQ8N6M9 145 aa11.01□□□□□ -0.65
PDLIM7-213ENST00000505074 ZNF492Q9P255 531 aa11.01□□□□□ -0.65
PDLIM7-213ENST00000505074 NMBP08949 121 aa11□□□□□ -0.65
PDLIM7-213ENST00000505074 RANP62826 216 aaKnown RBP11□□□□□ -0.65
PDLIM7-213ENST00000505074 CYCSP99999 105 aaKnown RBP11□□□□□ -0.65
PDLIM7-213ENST00000505074 MUC21Q5SSG8 566 aa11□□□□□ -0.65
PDLIM7-213ENST00000505074 Q6ZQT7 251 aa11□□□□□ -0.65
PDLIM7-213ENST00000505074 FXYD5Q96DB9 178 aa11□□□□□ -0.65
PDLIM7-213ENST00000505074 ST6GAL2Q96JF0 529 aa11□□□□□ -0.65
PDLIM7-213ENST00000505074 MDFICQ9P1T7 246 aa11□□□□□ -0.65
PDLIM7-213ENST00000505074 H0YIZ8 118 aa10.99□□□□□ -0.65
PDLIM7-213ENST00000505074 FAM229AH3BQW9 127 aa10.99□□□□□ -0.65
PDLIM7-213ENST00000505074 EREGO14944 169 aa10.99□□□□□ -0.65
PDLIM7-213ENST00000505074 SIVA1O15304 175 aa10.99□□□□□ -0.65
PDLIM7-213ENST00000505074 PRAF2O60831 178 aa10.99□□□□□ -0.65
PDLIM7-213ENST00000505074 UPK1BO75841 260 aa10.99□□□□□ -0.65
PDLIM7-213ENST00000505074 FFAR4Q5NUL3 377 aa10.99□□□□□ -0.65
PDLIM7-213ENST00000505074 CDPF1Q6NVV7 123 aa10.99□□□□□ -0.65
PDLIM7-213ENST00000505074 LINC00299Q6ZSB3 139 aa10.99□□□□□ -0.65
PDLIM7-213ENST00000505074 ATP5SQ99766 215 aa10.99□□□□□ -0.65
PDLIM7-213ENST00000505074 RPH3ALQ9UNE2 315 aa10.99□□□□□ -0.65
PDLIM7-213ENST00000505074 UBR4Q5T4S7 5183 aa10.99□□□□□ -0.65
PDLIM7-213ENST00000505074 VPS13BQ7Z7G8 4022 aa10.98□□□□□ -0.65
PDLIM7-213ENST00000505074 INMT-MINDY4F8WBC2 141 aa10.98□□□□□ -0.65
PDLIM7-213ENST00000505074 SSNA1O43805 119 aa10.98□□□□□ -0.65
PDLIM7-213ENST00000505074 NXPH4O95158 308 aa10.98□□□□□ -0.65
PDLIM7-213ENST00000505074 SMR3BP02814 79 aaPredicted RBP10.98□□□□□ -0.65
PDLIM7-213ENST00000505074 PET100P0DJ07 73 aa10.98□□□□□ -0.65
PDLIM7-213ENST00000505074 LINC00315P59091 139 aa10.98□□□□□ -0.65
PDLIM7-213ENST00000505074 SCGB1C1Q8TD33 95 aa10.98□□□□□ -0.65
PDLIM7-213ENST00000505074 C8orf49Q96NF6 230 aa10.98□□□□□ -0.65
PDLIM7-213ENST00000505074 SMIM3Q9BZL3 60 aa10.98□□□□□ -0.65
PDLIM7-213ENST00000505074 PRO0255Q9UI72 69 aa10.98□□□□□ -0.65
PDLIM7-213ENST00000505074 TRGV4A0A0C4DH28 118 aa10.97□□□□□ -0.65
PDLIM7-213ENST00000505074 IFNA5P01569 189 aa10.97□□□□□ -0.65
PDLIM7-213ENST00000505074 FUSP35637 526 aaKnown RBP eCLIP10.97□□□□□ -0.65
PDLIM7-213ENST00000505074 TAS2R45P59539 299 aa10.97□□□□□ -0.65
PDLIM7-213ENST00000505074 KHDC3LQ587J8 217 aa10.97□□□□□ -0.65
PDLIM7-213ENST00000505074 PPP1R1CQ8WVI7 109 aa10.97□□□□□ -0.65
PDLIM7-213ENST00000505074 HYLS1Q96M11 299 aa10.97□□□□□ -0.65
PDLIM7-213ENST00000505074 NAGKQ9UJ70 344 aa10.97□□□□□ -0.65
PDLIM7-213ENST00000505074 HHLA3Q9XRX5 114 aa10.97□□□□□ -0.65
PDLIM7-213ENST00000505074 SLAQ13239 276 aa10.96□□□□□ -0.65
PDLIM7-213ENST00000505074 PCNPQ8WW12 178 aaKnown RBP10.96□□□□□ -0.65
PDLIM7-213ENST00000505074 HSPB11Q9Y547 144 aa10.96□□□□□ -0.65
PDLIM7-213ENST00000505074 RBAKDNA6NC62 111 aa10.95□□□□□ -0.66
PDLIM7-213ENST00000505074 EIF3GO75821 320 aaKnown RBP eCLIP10.95□□□□□ -0.66
PDLIM7-213ENST00000505074 CRYBA4P53673 196 aa10.95□□□□□ -0.66
PDLIM7-213ENST00000505074 H2BFSP57053 126 aa10.95□□□□□ -0.66
PDLIM7-213ENST00000505074 ERVFC1-1P60608 527 aa10.95□□□□□ -0.66
PDLIM7-213ENST00000505074 ZNF266Q14584 549 aa10.95□□□□□ -0.66
PDLIM7-213ENST00000505074 MRPL23Q16540 153 aaKnown RBP10.95□□□□□ -0.66
PDLIM7-213ENST00000505074 TMEM183BQ1AE95 376 aa10.95□□□□□ -0.66
PDLIM7-213ENST00000505074 FAM159AQ6UWV7 190 aa10.95□□□□□ -0.66
PDLIM7-213ENST00000505074 Q6ZSN1 163 aa10.95□□□□□ -0.66
PDLIM7-213ENST00000505074 TMEM183AQ8IXX5 376 aa10.95□□□□□ -0.66
PDLIM7-213ENST00000505074 CMTM2Q8TAZ6 248 aa10.95□□□□□ -0.66
PDLIM7-213ENST00000505074 TRGV11A0A075B6L2 103 aa10.94□□□□□ -0.66
PDLIM7-213ENST00000505074 TRBV7-9A0A0J9YWB2 115 aa10.94□□□□□ -0.66
PDLIM7-213ENST00000505074 SFTA3P0C7M3 94 aa10.94□□□□□ -0.66
PDLIM7-213ENST00000505074 RPL12P30050 165 aaKnown RBP10.94□□□□□ -0.66
PDLIM7-213ENST00000505074 DIRC3C9JPN6 131 aa10.93□□□□□ -0.66
PDLIM7-213ENST00000505074 MPC2O95563 127 aa10.93□□□□□ -0.66
PDLIM7-213ENST00000505074 SRIP30626 198 aa10.93□□□□□ -0.66
PDLIM7-213ENST00000505074 KRTAP10-1P60331 282 aa10.93□□□□□ -0.66
PDLIM7-213ENST00000505074 IFITM3Q01628 133 aa10.93□□□□□ -0.66
PDLIM7-213ENST00000505074 FHL2Q14192 279 aa10.93□□□□□ -0.66
PDLIM7-213ENST00000505074 FAM74A1Q5RGS3 127 aa10.93□□□□□ -0.66
PDLIM7-213ENST00000505074 Q6ZRN7 208 aaPredicted RBP10.93□□□□□ -0.66
PDLIM7-213ENST00000505074 NEGR1Q7Z3B1 354 aa10.93□□□□□ -0.66
PDLIM7-213ENST00000505074 A0A1W2PPV4 95 aa10.92□□□□□ -0.66
PDLIM7-213ENST00000505074 PGPA6NDG6 321 aa10.92□□□□□ -0.66
PDLIM7-213ENST00000505074 DEFA1P59665 94 aa10.92□□□□□ -0.66
PDLIM7-213ENST00000505074 DEFA3P59666 94 aa10.92□□□□□ -0.66
PDLIM7-213ENST00000505074 SERTAD4-AS1Q5TG53 156 aa10.92□□□□□ -0.66
PDLIM7-213ENST00000505074 LYPD5Q6UWN5 251 aa10.92□□□□□ -0.66
PDLIM7-213ENST00000505074 SYT8Q8NBV8 401 aa10.92□□□□□ -0.66
PDLIM7-213ENST00000505074 ZNF479Q96JC4 524 aa10.92□□□□□ -0.66
PDLIM7-213ENST00000505074 MBD2Q9UBB5 411 aa10.92□□□□□ -0.66
PDLIM7-213ENST00000505074 TRAV9-2A0A087WT02 112 aa10.91□□□□□ -0.66
PDLIM7-213ENST00000505074 GYPEP15421 78 aa10.91□□□□□ -0.66
PDLIM7-213ENST00000505074 ACOT6Q3I5F7 207 aaPredicted RBP10.91□□□□□ -0.66
PDLIM7-213ENST00000505074 Q6AWC8 147 aa10.91□□□□□ -0.66
PDLIM7-213ENST00000505074 MARVELD1Q9BSK0 173 aa10.91□□□□□ -0.66
PDLIM7-213ENST00000505074 SPXQ9BT56 116 aa10.91□□□□□ -0.66
PDLIM7-213ENST00000505074 OTORQ9NRC9 128 aa10.91□□□□□ -0.66
PDLIM7-213ENST00000505074 LENEPQ9Y5L5 61 aa10.91□□□□□ -0.66
PDLIM7-213ENST00000505074 LY96Q9Y6Y9 160 aa10.91□□□□□ -0.66
PDLIM7-213ENST00000505074 F6UZH7 168 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms