RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 LENEPQ9Y5L5 61 aa12.06□□□□□ -0.48
SYNE4-207ENST00000505054 SERTM2A0A1B0GWG4 89 aa12.05□□□□□ -0.48
SYNE4-207ENST00000505054 TMEM189A5PLL7 270 aa12.05□□□□□ -0.48
SYNE4-207ENST00000505054 ZNF324O75467 553 aaPredicted RBP12.05□□□□□ -0.48
SYNE4-207ENST00000505054 GPX1P07203 203 aa12.05□□□□□ -0.48
SYNE4-207ENST00000505054 Q6ZQT7 251 aa12.05□□□□□ -0.48
SYNE4-207ENST00000505054 CYB561D1Q8N8Q1 229 aa12.05□□□□□ -0.48
SYNE4-207ENST00000505054 TVP23CQ96ET8 276 aa12.05□□□□□ -0.48
SYNE4-207ENST00000505054 SGK494Q96LW2 274 aa12.05□□□□□ -0.48
SYNE4-207ENST00000505054 NIPSNAP3BQ9BS92 247 aa12.05□□□□□ -0.48
SYNE4-207ENST00000505054 ATG101Q9BSB4 218 aa12.05□□□□□ -0.48
SYNE4-207ENST00000505054 ARL2-SNX15V9GYD0 113 aa12.05□□□□□ -0.48
SYNE4-207ENST00000505054 TRAV1-1A0A0B4J248 108 aa12.04□□□□□ -0.48
SYNE4-207ENST00000505054 PLAC8L1A1L4L8 177 aa12.04□□□□□ -0.48
SYNE4-207ENST00000505054 IGLV2-11P01706 119 aa12.04□□□□□ -0.48
SYNE4-207ENST00000505054 HTN1P15515 57 aa12.04□□□□□ -0.48
SYNE4-207ENST00000505054 CCDC28AQ8IWP9 274 aa12.04□□□□□ -0.48
SYNE4-207ENST00000505054 NKX6-2Q9C056 277 aaPredicted RBP12.04□□□□□ -0.48
SYNE4-207ENST00000505054 HECTD4Q9Y4D8 3996 aa12.03□□□□□ -0.48
SYNE4-207ENST00000505054 PEX7O00628 323 aa12.03□□□□□ -0.48
SYNE4-207ENST00000505054 PAGE4O60829 102 aa12.03□□□□□ -0.48
SYNE4-207ENST00000505054 IFNA7P01567 189 aa12.03□□□□□ -0.48
SYNE4-207ENST00000505054 ATP5G3P48201 142 aa12.03□□□□□ -0.48
SYNE4-207ENST00000505054 CCL20P78556 96 aa12.03□□□□□ -0.48
SYNE4-207ENST00000505054 LGALS9CQ6DKI2 356 aa12.03□□□□□ -0.48
SYNE4-207ENST00000505054 DKK2Q9UBU2 259 aa12.03□□□□□ -0.48
SYNE4-207ENST00000505054 K7EQM0 130 aa12.02□□□□□ -0.49
SYNE4-207ENST00000505054 C12orf74Q32Q52 190 aa12.02□□□□□ -0.49
SYNE4-207ENST00000505054 FAM222AQ5U5X8 452 aa12.02□□□□□ -0.49
SYNE4-207ENST00000505054 CST9LP1Q5W188 147 aa12.02□□□□□ -0.49
SYNE4-207ENST00000505054 ALKAL2Q6UX46 152 aa12.02□□□□□ -0.49
SYNE4-207ENST00000505054 ZNF767PQ75MW2 155 aa12.02□□□□□ -0.49
SYNE4-207ENST00000505054 TMEM75Q8N9X5 138 aa12.02□□□□□ -0.49
SYNE4-207ENST00000505054 RNASE8Q8TDE3 154 aaKnown RBP12.02□□□□□ -0.49
SYNE4-207ENST00000505054 LINC00479Q96M42 142 aa12.02□□□□□ -0.49
SYNE4-207ENST00000505054 PYGO2Q9BRQ0 406 aa12.02□□□□□ -0.49
SYNE4-207ENST00000505054 PSG8Q9UQ74 426 aa12.02□□□□□ -0.49
SYNE4-207ENST00000505054 DNAH10Q8IVF4 4471 aa12.02□□□□□ -0.49
SYNE4-207ENST00000505054 TRAV34A0A0B4J273 112 aa12.01□□□□□ -0.49
SYNE4-207ENST00000505054 F6UZH7 168 aa12.01□□□□□ -0.49
SYNE4-207ENST00000505054 FLI1Q01543 452 aaPredicted RBP12.01□□□□□ -0.49
SYNE4-207ENST00000505054 Q6ZTC4 211 aa12.01□□□□□ -0.49
SYNE4-207ENST00000505054 TMEM263Q8WUH6 116 aaKnown RBP12.01□□□□□ -0.49
SYNE4-207ENST00000505054 PHLDA1Q8WV24 401 aaPredicted RBP12.01□□□□□ -0.49
SYNE4-207ENST00000505054 HIST1H2BAQ96A08 127 aa12.01□□□□□ -0.49
SYNE4-207ENST00000505054 C16orf74Q96GX8 76 aa12.01□□□□□ -0.49
SYNE4-207ENST00000505054 LINC00467Q9BRT7 94 aa12.01□□□□□ -0.49
SYNE4-207ENST00000505054 PCLOQ9Y6V0 5065 aa12.01□□□□□ -0.49
SYNE4-207ENST00000505054 SPART-AS1P0CW21 52 aa12□□□□□ -0.49
SYNE4-207ENST00000505054 Q6AWC8 147 aa12□□□□□ -0.49
SYNE4-207ENST00000505054 ZNF493Q6ZR52 646 aa12□□□□□ -0.49
SYNE4-207ENST00000505054 TREM1Q9NP99 234 aa12□□□□□ -0.49
SYNE4-207ENST00000505054 FBLL1A6NHQ2 334 aaKnown RBP11.99□□□□□ -0.49
SYNE4-207ENST00000505054 PPT1P50897 306 aa11.99□□□□□ -0.49
SYNE4-207ENST00000505054 PRNTQ86SH4 94 aa11.99□□□□□ -0.49
SYNE4-207ENST00000505054 C8orf49Q96NF6 230 aa11.99□□□□□ -0.49
SYNE4-207ENST00000505054 TCEAL7Q9BRU2 100 aa11.99□□□□□ -0.49
SYNE4-207ENST00000505054 GNG13Q9P2W3 67 aa11.99□□□□□ -0.49
SYNE4-207ENST00000505054 IGHV1OR15-1A0A075B7D0 117 aa11.98□□□□□ -0.49
SYNE4-207ENST00000505054 TEX48A0A1B0GUV7 120 aa11.98□□□□□ -0.49
SYNE4-207ENST00000505054 Q86TA4 180 aa11.98□□□□□ -0.49
SYNE4-207ENST00000505054 EIF4E3Q8N5X7 224 aaKnown RBP11.98□□□□□ -0.49
SYNE4-207ENST00000505054 NDFIP1Q9BT67 221 aa11.98□□□□□ -0.49
SYNE4-207ENST00000505054 MANBALQ9NQG1 85 aa11.98□□□□□ -0.49
SYNE4-207ENST00000505054 DNAH6Q9C0G6 4158 aa11.97□□□□□ -0.49
SYNE4-207ENST00000505054 SCO2A0A1W2PP80 73 aa11.97□□□□□ -0.49
SYNE4-207ENST00000505054 LYRM9A8MSI8 78 aa11.97□□□□□ -0.49
SYNE4-207ENST00000505054 C11orf94C9JXX5 98 aa11.97□□□□□ -0.49
SYNE4-207ENST00000505054 TEX46H3BTG2 121 aa11.97□□□□□ -0.49
SYNE4-207ENST00000505054 RGS13O14921 159 aa11.97□□□□□ -0.49
SYNE4-207ENST00000505054 ZNF80P51504 273 aaPredicted RBP11.97□□□□□ -0.49
SYNE4-207ENST00000505054 ANXA2RQ3ZCQ2 193 aa11.97□□□□□ -0.49
SYNE4-207ENST00000505054 MUC21Q5SSG8 566 aa11.97□□□□□ -0.49
SYNE4-207ENST00000505054 C11orf72Q8NBR9 251 aa11.97□□□□□ -0.49
SYNE4-207ENST00000505054 TP53TG3Q9ULZ0 132 aa11.97□□□□□ -0.49
SYNE4-207ENST00000505054 KLF12Q9Y4X4 402 aa11.97□□□□□ -0.49
SYNE4-207ENST00000505054 CBY3A6NI87 242 aa11.96□□□□□ -0.49
SYNE4-207ENST00000505054 ZNF680Q8NEM1 530 aa11.96□□□□□ -0.49
SYNE4-207ENST00000505054 C2CD4CQ8TF44 421 aa11.96□□□□□ -0.49
SYNE4-207ENST00000505054 NOP10Q9NPE3 64 aaKnown RBP11.96□□□□□ -0.49
SYNE4-207ENST00000505054 TIMM8BQ9Y5J9 83 aaPredicted RBP11.96□□□□□ -0.49
SYNE4-207ENST00000505054 TRAV10A0A0B4J240 114 aa11.95□□□□□ -0.5
SYNE4-207ENST00000505054 TRAV21A0A0B4J279 112 aa11.95□□□□□ -0.5
SYNE4-207ENST00000505054 GCGP01275 180 aa11.95□□□□□ -0.5
SYNE4-207ENST00000505054 AKR1C3P42330 323 aa11.95□□□□□ -0.5
SYNE4-207ENST00000505054 SAPCD1Q5SSQ6 148 aa11.95□□□□□ -0.5
SYNE4-207ENST00000505054 FMC1Q96HJ9 113 aa11.95□□□□□ -0.5
SYNE4-207ENST00000505054 GSN-AS1Q9NRJ2 163 aa11.95□□□□□ -0.5
SYNE4-207ENST00000505054 TRBV6-1A0A0K0K1D8 114 aa11.94□□□□□ -0.5
SYNE4-207ENST00000505054 DAD1P61803 113 aa11.94□□□□□ -0.5
SYNE4-207ENST00000505054 TMEM183BQ1AE95 376 aa11.94□□□□□ -0.5
SYNE4-207ENST00000505054 SMUG1Q53HV7 270 aa11.94□□□□□ -0.5
SYNE4-207ENST00000505054 C11orf21Q9P2W6 132 aa11.94□□□□□ -0.5
SYNE4-207ENST00000505054 NAGKQ9UJ70 344 aa11.94□□□□□ -0.5
SYNE4-207ENST00000505054 SNURFLB1AK76 121 aa11.93□□□□□ -0.5
SYNE4-207ENST00000505054 LTAP01374 205 aa11.93□□□□□ -0.5
SYNE4-207ENST00000505054 DEFB130BP0DP73 79 aa11.93□□□□□ -0.5
SYNE4-207ENST00000505054 DEFB130AP0DP74 79 aa11.93□□□□□ -0.5
SYNE4-207ENST00000505054 BCL2P10415 239 aa11.93□□□□□ -0.5
SYNE4-207ENST00000505054 TCL1AP56279 114 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms