RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 ATRAIDQ6UW56 229 aa3.63□□□□□ -1.83
DEPDC1B-203ENST00000505017 TOMM20LQ6UXN7 152 aa3.63□□□□□ -1.83
DEPDC1B-203ENST00000505017 CLEC19AQ6UXS0 136 aa3.63□□□□□ -1.83
DEPDC1B-203ENST00000505017 BTF3L4Q96K17 158 aa3.63□□□□□ -1.83
DEPDC1B-203ENST00000505017 UBE2E2Q96LR5 201 aa3.63□□□□□ -1.83
DEPDC1B-203ENST00000505017 NOL4LQ96MY1 436 aaPredicted RBP3.63□□□□□ -1.83
DEPDC1B-203ENST00000505017 MS4A10Q96PG2 267 aa3.63□□□□□ -1.83
DEPDC1B-203ENST00000505017 GNB4Q9HAV0 340 aa3.63□□□□□ -1.83
DEPDC1B-203ENST00000505017 BIN3Q9NQY0 253 aa3.63□□□□□ -1.83
DEPDC1B-203ENST00000505017 AKAP9Q99996 3911 aa3.63□□□□□ -1.83
DEPDC1B-203ENST00000505017 TRBV19A0A075B6N1 114 aa3.62□□□□□ -1.83
DEPDC1B-203ENST00000505017 HELTA6NFD8 242 aa3.62□□□□□ -1.83
DEPDC1B-203ENST00000505017 K7EQM0 130 aa3.62□□□□□ -1.83
DEPDC1B-203ENST00000505017 DNASE2O00115 360 aaPredicted RBP3.62□□□□□ -1.83
DEPDC1B-203ENST00000505017 PEX7O00628 323 aa3.62□□□□□ -1.83
DEPDC1B-203ENST00000505017 SLC25A5P05141 298 aaKnown RBP3.62□□□□□ -1.83
DEPDC1B-203ENST00000505017 CRYBA1P05813 215 aa3.62□□□□□ -1.83
DEPDC1B-203ENST00000505017 LGALS1P09382 135 aaKnown RBP3.62□□□□□ -1.83
DEPDC1B-203ENST00000505017 PYYP10082 97 aa3.62□□□□□ -1.83
DEPDC1B-203ENST00000505017 NPPCP23582 126 aa3.62□□□□□ -1.83
DEPDC1B-203ENST00000505017 AKR1C3P42330 323 aa3.62□□□□□ -1.83
DEPDC1B-203ENST00000505017 RPL35P42766 123 aaKnown RBP3.62□□□□□ -1.83
DEPDC1B-203ENST00000505017 RPL23P62829 140 aaKnown RBP3.62□□□□□ -1.83
DEPDC1B-203ENST00000505017 BTN1A1Q13410 526 aa3.62□□□□□ -1.83
DEPDC1B-203ENST00000505017 ZNF674Q2M3X9 581 aa3.62□□□□□ -1.83
DEPDC1B-203ENST00000505017 FAM106AQ4KMX7 169 aa3.62□□□□□ -1.83
DEPDC1B-203ENST00000505017 KRTAP5-5Q701N2 237 aaPredicted RBP3.62□□□□□ -1.83
DEPDC1B-203ENST00000505017 GPHB5Q86YW7 130 aa3.62□□□□□ -1.83
DEPDC1B-203ENST00000505017 OR8I2Q8N0Y5 310 aa3.62□□□□□ -1.83
DEPDC1B-203ENST00000505017 C15orf54Q8N8G6 183 aa3.62□□□□□ -1.83
DEPDC1B-203ENST00000505017 Q8NBF4 154 aa3.62□□□□□ -1.83
DEPDC1B-203ENST00000505017 OR4X2Q8NGF9 303 aa3.62□□□□□ -1.83
DEPDC1B-203ENST00000505017 MRPL53Q96EL3 112 aaKnown RBP3.62□□□□□ -1.83
DEPDC1B-203ENST00000505017 FMC1Q96HJ9 113 aa3.62□□□□□ -1.83
DEPDC1B-203ENST00000505017 IMMP2LQ96T52 175 aa3.62□□□□□ -1.83
DEPDC1B-203ENST00000505017 SLC50A1Q9BRV3 221 aa3.62□□□□□ -1.83
DEPDC1B-203ENST00000505017 ATG101Q9BSB4 218 aa3.62□□□□□ -1.83
DEPDC1B-203ENST00000505017 Q9H3A6 140 aa3.62□□□□□ -1.83
DEPDC1B-203ENST00000505017 C16orf95Q9H693 158 aa3.62□□□□□ -1.83
DEPDC1B-203ENST00000505017 ZNF586Q9NXT0 402 aa3.62□□□□□ -1.83
DEPDC1B-203ENST00000505017 PEF1Q9UBV8 284 aaKnown RBP3.62□□□□□ -1.83
DEPDC1B-203ENST00000505017 LINC00527Q9UJ94 153 aa3.62□□□□□ -1.83
DEPDC1B-203ENST00000505017 EPDR1Q9UM22 224 aa3.62□□□□□ -1.83
DEPDC1B-203ENST00000505017 KLF12Q9Y4X4 402 aa3.62□□□□□ -1.83
DEPDC1B-203ENST00000505017 S4R3C0 116 aa3.62□□□□□ -1.83
DEPDC1B-203ENST00000505017 MXRA5Q9NR99 2828 aa3.61□□□□□ -1.83
DEPDC1B-203ENST00000505017 MTORP42345 2549 aa3.61□□□□□ -1.83
DEPDC1B-203ENST00000505017 CSMD2Q7Z408 3487 aa3.61□□□□□ -1.83
DEPDC1B-203ENST00000505017 TRAV9-1A0A075B6T8 112 aa3.61□□□□□ -1.83
DEPDC1B-203ENST00000505017 CLPSL1A2RUU4 121 aa3.61□□□□□ -1.83
DEPDC1B-203ENST00000505017 PGPA6NDG6 321 aa3.61□□□□□ -1.83
DEPDC1B-203ENST00000505017 H7BYZ3 331 aa3.61□□□□□ -1.83
DEPDC1B-203ENST00000505017 LGALS9O00182 355 aa3.61□□□□□ -1.83
DEPDC1B-203ENST00000505017 SCO1O75880 301 aa3.61□□□□□ -1.83
DEPDC1B-203ENST00000505017 NDUFA7O95182 113 aa3.61□□□□□ -1.83
DEPDC1B-203ENST00000505017 IGHV3-23P01764 117 aa3.61□□□□□ -1.83
DEPDC1B-203ENST00000505017 TCRAP04437 139 aa3.61□□□□□ -1.83
DEPDC1B-203ENST00000505017 CSN1S1P47710 185 aa3.61□□□□□ -1.83
DEPDC1B-203ENST00000505017 CDX1P47902 265 aaPredicted RBP3.61□□□□□ -1.83
DEPDC1B-203ENST00000505017 GNG4P50150 75 aa3.61□□□□□ -1.83
DEPDC1B-203ENST00000505017 UBE2G1P62253 170 aa3.61□□□□□ -1.83
DEPDC1B-203ENST00000505017 RANP62826 216 aaKnown RBP3.61□□□□□ -1.83
DEPDC1B-203ENST00000505017 RPL19P84098 196 aaKnown RBP3.61□□□□□ -1.83
DEPDC1B-203ENST00000505017 KIAA0141Q14154 515 aaPredicted RBP3.61□□□□□ -1.83
DEPDC1B-203ENST00000505017 ADIRFQ15847 76 aa3.61□□□□□ -1.83
DEPDC1B-203ENST00000505017 TMEM183BQ1AE95 376 aa3.61□□□□□ -1.83
DEPDC1B-203ENST00000505017 CENPWQ5EE01 88 aa3.61□□□□□ -1.83
DEPDC1B-203ENST00000505017 C16orf54Q6UWD8 224 aa3.61□□□□□ -1.83
DEPDC1B-203ENST00000505017 SIGLEC15Q6ZMC9 328 aa3.61□□□□□ -1.83
DEPDC1B-203ENST00000505017 Q6ZR54 194 aa3.61□□□□□ -1.83
DEPDC1B-203ENST00000505017 LINC01551Q86U37 167 aa3.61□□□□□ -1.83
DEPDC1B-203ENST00000505017 TMEM75Q8N9X5 138 aa3.61□□□□□ -1.83
DEPDC1B-203ENST00000505017 CMTM2Q8TAZ6 248 aa3.61□□□□□ -1.83
DEPDC1B-203ENST00000505017 BLNKQ8WV28 456 aa3.61□□□□□ -1.83
DEPDC1B-203ENST00000505017 ISOC2Q96AB3 205 aa3.61□□□□□ -1.83
DEPDC1B-203ENST00000505017 DAZ1Q9NQZ3 744 aaKnown RBP3.61□□□□□ -1.83
DEPDC1B-203ENST00000505017 UFC1Q9Y3C8 167 aa3.61□□□□□ -1.83
DEPDC1B-203ENST00000505017 TRBV20OR9-2A0A075B6H5 130 aa3.6□□□□□ -1.83
DEPDC1B-203ENST00000505017 TRBV24-1A0A075B6N3 115 aa3.6□□□□□ -1.83
DEPDC1B-203ENST00000505017 IGHV7-4-1A0A0J9YVY3 117 aa3.6□□□□□ -1.83
DEPDC1B-203ENST00000505017 A0A1B0GUS0 222 aa3.6□□□□□ -1.83
DEPDC1B-203ENST00000505017 RBAKDNA6NC62 111 aa3.6□□□□□ -1.83
DEPDC1B-203ENST00000505017 A8MWP6 167 aa3.6□□□□□ -1.83
DEPDC1B-203ENST00000505017 PPP5D1E7EU14 171 aa3.6□□□□□ -1.83
DEPDC1B-203ENST00000505017 J3KRW8 73 aa3.6□□□□□ -1.83
DEPDC1B-203ENST00000505017 ISLRO14498 428 aa3.6□□□□□ -1.83
DEPDC1B-203ENST00000505017 LY6G6DO95868 133 aa3.6□□□□□ -1.83
DEPDC1B-203ENST00000505017 GCGP01275 180 aa3.6□□□□□ -1.83
DEPDC1B-203ENST00000505017 FOLR2P14207 255 aa3.6□□□□□ -1.83
DEPDC1B-203ENST00000505017 S100PP25815 95 aa3.6□□□□□ -1.83
DEPDC1B-203ENST00000505017 RPEL1Q2QD12 228 aa3.6□□□□□ -1.83
DEPDC1B-203ENST00000505017 RNF212Q495C1 297 aa3.6□□□□□ -1.83
DEPDC1B-203ENST00000505017 LEMD1Q68G75 181 aa3.6□□□□□ -1.83
DEPDC1B-203ENST00000505017 IL17RELQ6ZVW7 336 aa3.6□□□□□ -1.83
DEPDC1B-203ENST00000505017 FAM231DQ6ZW35 169 aa3.6□□□□□ -1.83
DEPDC1B-203ENST00000505017 KLHDC1Q8N7A1 406 aa3.6□□□□□ -1.83
DEPDC1B-203ENST00000505017 OCC1Q8TAD7 63 aa3.6□□□□□ -1.83
DEPDC1B-203ENST00000505017 C4orf3Q8WVX3 66 aa3.6□□□□□ -1.83
DEPDC1B-203ENST00000505017 SFRP2Q96HF1 295 aa3.6□□□□□ -1.83
DEPDC1B-203ENST00000505017 IGF2BP2-AS1Q96M15 143 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms