RNA–Protein interactions for RNA: ENST00000503923.1

VCAN-205, Transcript of versican, humanhuman

TSL 4

Gene VCAN, Length 498 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-205ENST00000503923 C11orf94C9JXX5 98 aa8.01□□□□□ -1.13
VCAN-205ENST00000503923 ZNF324O75467 553 aaPredicted RBP8.01□□□□□ -1.13
VCAN-205ENST00000503923 IGLV2-11P01706 119 aa8.01□□□□□ -1.13
VCAN-205ENST00000503923 PRNTQ86SH4 94 aa8.01□□□□□ -1.13
VCAN-205ENST00000503923 MUC7Q8TAX7 377 aa8.01□□□□□ -1.13
VCAN-205ENST00000503923 LINC00479Q96M42 142 aa8.01□□□□□ -1.13
VCAN-205ENST00000503923 TXNDC17Q9BRA2 123 aa8.01□□□□□ -1.13
VCAN-205ENST00000503923 TRAV34A0A0B4J273 112 aa8□□□□□ -1.13
VCAN-205ENST00000503923 PRM2P04554 102 aa8□□□□□ -1.13
VCAN-205ENST00000503923 HTN1P15515 57 aa8□□□□□ -1.13
VCAN-205ENST00000503923 TAGLN2P37802 199 aaKnown RBP8□□□□□ -1.13
VCAN-205ENST00000503923 AKR1C3P42330 323 aa8□□□□□ -1.13
VCAN-205ENST00000503923 EMP1P54849 157 aa8□□□□□ -1.13
VCAN-205ENST00000503923 UBE2G1P62253 170 aa8□□□□□ -1.13
VCAN-205ENST00000503923 SAPCD1Q5SSQ6 148 aa8□□□□□ -1.13
VCAN-205ENST00000503923 Q6AWC8 147 aa8□□□□□ -1.13
VCAN-205ENST00000503923 TEX261Q6UWH6 196 aa8□□□□□ -1.13
VCAN-205ENST00000503923 ZNF493Q6ZR52 646 aa8□□□□□ -1.13
VCAN-205ENST00000503923 C11orf45Q8TAV5 145 aa8□□□□□ -1.13
VCAN-205ENST00000503923 TVP23CQ96ET8 276 aa8□□□□□ -1.13
VCAN-205ENST00000503923 C16orf74Q96GX8 76 aa8□□□□□ -1.13
VCAN-205ENST00000503923 FMC1Q96HJ9 113 aa8□□□□□ -1.13
VCAN-205ENST00000503923 LINC00467Q9BRT7 94 aa8□□□□□ -1.13
VCAN-205ENST00000503923 TEX48A0A1B0GUV7 120 aa7.99□□□□□ -1.13
VCAN-205ENST00000503923 CXorf65A6NEN9 183 aa7.99□□□□□ -1.13
VCAN-205ENST00000503923 C3orf84H3BNL1 204 aa7.99□□□□□ -1.13
VCAN-205ENST00000503923 RGS13O14921 159 aa7.99□□□□□ -1.13
VCAN-205ENST00000503923 S100A9P06702 114 aaKnown RBP7.99□□□□□ -1.13
VCAN-205ENST00000503923 BCL2P10415 239 aa7.99□□□□□ -1.13
VCAN-205ENST00000503923 AZU1P20160 251 aa7.99□□□□□ -1.13
VCAN-205ENST00000503923 TMEM183BQ1AE95 376 aa7.99□□□□□ -1.13
VCAN-205ENST00000503923 Q86TA4 180 aa7.99□□□□□ -1.13
VCAN-205ENST00000503923 EIF4E3Q8N5X7 224 aaKnown RBP7.99□□□□□ -1.13
VCAN-205ENST00000503923 LYPD6BQ8NI32 183 aa7.99□□□□□ -1.13
VCAN-205ENST00000503923 TMEM263Q8WUH6 116 aaKnown RBP7.99□□□□□ -1.13
VCAN-205ENST00000503923 KLF12Q9Y4X4 402 aa7.99□□□□□ -1.13
VCAN-205ENST00000503923 IGHV1OR15-1A0A075B7D0 117 aa7.98□□□□□ -1.13
VCAN-205ENST00000503923 TRAV21A0A0B4J279 112 aa7.98□□□□□ -1.13
VCAN-205ENST00000503923 TRBV6-1A0A0K0K1D8 114 aa7.98□□□□□ -1.13
VCAN-205ENST00000503923 SCO2A0A1W2PP80 73 aa7.98□□□□□ -1.13
VCAN-205ENST00000503923 SPART-AS1P0CW21 52 aa7.98□□□□□ -1.13
VCAN-205ENST00000503923 MEF2BQ02080 365 aaPredicted RBP7.98□□□□□ -1.13
VCAN-205ENST00000503923 ANXA2RQ3ZCQ2 193 aa7.98□□□□□ -1.13
VCAN-205ENST00000503923 SMUG1Q53HV7 270 aa7.98□□□□□ -1.13
VCAN-205ENST00000503923 ZNF680Q8NEM1 530 aa7.98□□□□□ -1.13
VCAN-205ENST00000503923 RNASE8Q8TDE3 154 aaKnown RBP7.98□□□□□ -1.13
VCAN-205ENST00000503923 C2CD4CQ8TF44 421 aa7.98□□□□□ -1.13
VCAN-205ENST00000503923 C8orf49Q96NF6 230 aa7.98□□□□□ -1.13
VCAN-205ENST00000503923 DKK2Q9UBU2 259 aa7.98□□□□□ -1.13
VCAN-205ENST00000503923 VAX2Q9UIW0 290 aa7.98□□□□□ -1.13
VCAN-205ENST00000503923 CELA1Q9UNI1 258 aa7.98□□□□□ -1.13
VCAN-205ENST00000503923 ZFP30Q9Y2G7 519 aa7.98□□□□□ -1.13
VCAN-205ENST00000503923 PLAC8L1A1L4L8 177 aa7.97□□□□□ -1.13
VCAN-205ENST00000503923 CBY3A6NI87 242 aa7.97□□□□□ -1.13
VCAN-205ENST00000503923 PDE6DO43924 150 aa7.97□□□□□ -1.13
VCAN-205ENST00000503923 GCGP01275 180 aa7.97□□□□□ -1.13
VCAN-205ENST00000503923 NANOS2P60321 138 aaKnown RBP7.97□□□□□ -1.13
VCAN-205ENST00000503923 FAM222AQ5U5X8 452 aa7.97□□□□□ -1.13
VCAN-205ENST00000503923 Q6ZQT7 251 aa7.97□□□□□ -1.13
VCAN-205ENST00000503923 C11orf52Q96A22 123 aa7.97□□□□□ -1.13
VCAN-205ENST00000503923 LYRM9A8MSI8 78 aa7.96□□□□□ -1.14
VCAN-205ENST00000503923 SNURFLB1AK76 121 aa7.96□□□□□ -1.14
VCAN-205ENST00000503923 LTAP01374 205 aa7.96□□□□□ -1.14
VCAN-205ENST00000503923 PFN1P07737 140 aaKnown RBP7.96□□□□□ -1.14
VCAN-205ENST00000503923 ZNF80P51504 273 aaPredicted RBP7.96□□□□□ -1.14
VCAN-205ENST00000503923 MUC21Q5SSG8 566 aa7.96□□□□□ -1.14
VCAN-205ENST00000503923 ZFAND6Q6FIF0 208 aa7.96□□□□□ -1.14
VCAN-205ENST00000503923 FAM159AQ6UWV7 190 aa7.96□□□□□ -1.14
VCAN-205ENST00000503923 COX8CQ7Z4L0 72 aa7.96□□□□□ -1.14
VCAN-205ENST00000503923 NAGKQ9UJ70 344 aa7.96□□□□□ -1.14
VCAN-205ENST00000503923 TIMM8BQ9Y5J9 83 aaPredicted RBP7.96□□□□□ -1.14
VCAN-205ENST00000503923 TRGV11A0A075B6L2 103 aa7.95□□□□□ -1.14
VCAN-205ENST00000503923 RBFOX3A6NFN3 312 aa7.95□□□□□ -1.14
VCAN-205ENST00000503923 C12orf74Q32Q52 190 aa7.95□□□□□ -1.14
VCAN-205ENST00000503923 TDRG1Q3Y452 100 aa7.95□□□□□ -1.14
VCAN-205ENST00000503923 IBA57Q5T440 356 aaKnown RBP7.95□□□□□ -1.14
VCAN-205ENST00000503923 TMEM183AQ8IXX5 376 aa7.95□□□□□ -1.14
VCAN-205ENST00000503923 KCNS1Q96KK3 526 aa7.95□□□□□ -1.14
VCAN-205ENST00000503923 STARD9Q9P2P6 4700 aa7.95□□□□□ -1.14
VCAN-205ENST00000503923 NUPR2A6NF83 97 aa7.94□□□□□ -1.14
VCAN-205ENST00000503923 FABP5P3A8MUU1 101 aa7.94□□□□□ -1.14
VCAN-205ENST00000503923 RPL35P42766 123 aaKnown RBP7.94□□□□□ -1.14
VCAN-205ENST00000503923 TCL1AP56279 114 aa7.94□□□□□ -1.14
VCAN-205ENST00000503923 DAD1P61803 113 aa7.94□□□□□ -1.14
VCAN-205ENST00000503923 ZNF506Q5JVG8 444 aa7.94□□□□□ -1.14
VCAN-205ENST00000503923 CASC10Q5T4H9 136 aa7.94□□□□□ -1.14
VCAN-205ENST00000503923 Q6ZTC4 211 aa7.94□□□□□ -1.14
VCAN-205ENST00000503923 ZNF767PQ75MW2 155 aa7.94□□□□□ -1.14
VCAN-205ENST00000503923 BAGE2Q86Y30 109 aa7.94□□□□□ -1.14
VCAN-205ENST00000503923 C11orf72Q8NBR9 251 aa7.94□□□□□ -1.14
VCAN-205ENST00000503923 PHLDA1Q8WV24 401 aaPredicted RBP7.94□□□□□ -1.14
VCAN-205ENST00000503923 ZC2HC1AQ96GY0 325 aa7.94□□□□□ -1.14
VCAN-205ENST00000503923 SDF2L1Q9HCN8 221 aa7.94□□□□□ -1.14
VCAN-205ENST00000503923 NOP10Q9NPE3 64 aaKnown RBP7.94□□□□□ -1.14
VCAN-205ENST00000503923 GSN-AS1Q9NRJ2 163 aa7.94□□□□□ -1.14
VCAN-205ENST00000503923 MED9Q9NWA0 146 aa7.94□□□□□ -1.14
VCAN-205ENST00000503923 TP53TG3Q9ULZ0 132 aa7.94□□□□□ -1.14
VCAN-205ENST00000503923 TRAV10A0A0B4J240 114 aa7.93□□□□□ -1.14
VCAN-205ENST00000503923 ZNF415Q09FC8 603 aa7.93□□□□□ -1.14
VCAN-205ENST00000503923 DAZ2Q13117 558 aaKnown RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms