RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 RNASE8Q8TDE3 154 aaKnown RBP17.97■□□□□ 0.47
LSM6-202ENST00000502781 SGK494Q96LW2 274 aa17.97■□□□□ 0.47
LSM6-202ENST00000502781 PSG8Q9UQ74 426 aa17.97■□□□□ 0.47
LSM6-202ENST00000502781 CXorf65A6NEN9 183 aa17.96■□□□□ 0.47
LSM6-202ENST00000502781 ATP5G3P48201 142 aa17.96■□□□□ 0.47
LSM6-202ENST00000502781 EMP1P54849 157 aa17.96■□□□□ 0.47
LSM6-202ENST00000502781 FLI1Q01543 452 aaPredicted RBP17.96■□□□□ 0.47
LSM6-202ENST00000502781 CST9LP1Q5W188 147 aa17.96■□□□□ 0.47
LSM6-202ENST00000502781 ZNF493Q6ZR52 646 aa17.96■□□□□ 0.47
LSM6-202ENST00000502781 TMEM263Q8WUH6 116 aaKnown RBP17.96■□□□□ 0.47
LSM6-202ENST00000502781 DKK2Q9UBU2 259 aa17.96■□□□□ 0.47
LSM6-202ENST00000502781 CSMD3Q7Z407 3707 aa17.96■□□□□ 0.47
LSM6-202ENST00000502781 HTN1P15515 57 aa17.95■□□□□ 0.46
LSM6-202ENST00000502781 Q6ZQT7 251 aa17.95■□□□□ 0.46
LSM6-202ENST00000502781 C16orf74Q96GX8 76 aa17.95■□□□□ 0.46
LSM6-202ENST00000502781 LINC00479Q96M42 142 aa17.95■□□□□ 0.46
LSM6-202ENST00000502781 TREM1Q9NP99 234 aa17.95■□□□□ 0.46
LSM6-202ENST00000502781 TEX46H3BTG2 121 aa17.94■□□□□ 0.46
LSM6-202ENST00000502781 SPART-AS1P0CW21 52 aa17.94■□□□□ 0.46
LSM6-202ENST00000502781 PMS2P11Q13670 270 aa17.94■□□□□ 0.46
LSM6-202ENST00000502781 STARD9Q9P2P6 4700 aa17.94■□□□□ 0.46
LSM6-202ENST00000502781 TEX48A0A1B0GUV7 120 aa17.93■□□□□ 0.46
LSM6-202ENST00000502781 FAM222AQ5U5X8 452 aa17.93■□□□□ 0.46
LSM6-202ENST00000502781 MANBALQ9NQG1 85 aa17.93■□□□□ 0.46
LSM6-202ENST00000502781 KLF12Q9Y4X4 402 aa17.93■□□□□ 0.46
LSM6-202ENST00000502781 TRAV34A0A0B4J273 112 aa17.92■□□□□ 0.46
LSM6-202ENST00000502781 F6UZH7 168 aa17.92■□□□□ 0.46
LSM6-202ENST00000502781 C12orf74Q32Q52 190 aa17.92■□□□□ 0.46
LSM6-202ENST00000502781 ANXA2RQ3ZCQ2 193 aa17.92■□□□□ 0.46
LSM6-202ENST00000502781 NDFIP1Q9BT67 221 aa17.92■□□□□ 0.46
LSM6-202ENST00000502781 EIF4E3Q8N5X7 224 aaKnown RBP17.91■□□□□ 0.46
LSM6-202ENST00000502781 IGHV1OR15-1A0A075B7D0 117 aa17.91■□□□□ 0.46
LSM6-202ENST00000502781 LYRM9A8MSI8 78 aa17.91■□□□□ 0.46
LSM6-202ENST00000502781 Q6ZTC4 211 aa17.91■□□□□ 0.46
LSM6-202ENST00000502781 PRNTQ86SH4 94 aa17.91■□□□□ 0.46
LSM6-202ENST00000502781 PHLDA1Q8WV24 401 aaPredicted RBP17.91■□□□□ 0.46
LSM6-202ENST00000502781 GNG13Q9P2W3 67 aa17.91■□□□□ 0.46
LSM6-202ENST00000502781 NUPR2A6NF83 97 aa17.9■□□□□ 0.46
LSM6-202ENST00000502781 C11orf94C9JXX5 98 aa17.9■□□□□ 0.46
LSM6-202ENST00000502781 SAPCD1Q5SSQ6 148 aa17.9■□□□□ 0.46
LSM6-202ENST00000502781 CEMP1Q6PRD7 247 aaPredicted RBP17.9■□□□□ 0.46
LSM6-202ENST00000502781 Q86TA4 180 aa17.9■□□□□ 0.46
LSM6-202ENST00000502781 LYPD6BQ8NI32 183 aa17.9■□□□□ 0.46
LSM6-202ENST00000502781 C2CD4CQ8TF44 421 aa17.9■□□□□ 0.46
LSM6-202ENST00000502781 C8orf49Q96NF6 230 aa17.9■□□□□ 0.46
LSM6-202ENST00000502781 TRBV6-1A0A0K0K1D8 114 aa17.89■□□□□ 0.45
LSM6-202ENST00000502781 RGS13O14921 159 aa17.89■□□□□ 0.45
LSM6-202ENST00000502781 BLOC1S1P78537 153 aa17.89■□□□□ 0.45
LSM6-202ENST00000502781 C11orf72Q8NBR9 251 aa17.89■□□□□ 0.45
LSM6-202ENST00000502781 FMC1Q96HJ9 113 aa17.89■□□□□ 0.45
LSM6-202ENST00000502781 TXNDC17Q9BRA2 123 aa17.89■□□□□ 0.45
LSM6-202ENST00000502781 TIMM8BQ9Y5J9 83 aaPredicted RBP17.89■□□□□ 0.45
LSM6-202ENST00000502781 TRAV21A0A0B4J279 112 aa17.88■□□□□ 0.45
LSM6-202ENST00000502781 TDRG1Q3Y452 100 aa17.88■□□□□ 0.45
LSM6-202ENST00000502781 ZNF767PQ75MW2 155 aa17.88■□□□□ 0.45
LSM6-202ENST00000502781 ZNF680Q8NEM1 530 aa17.88■□□□□ 0.45
LSM6-202ENST00000502781 SCO2A0A1W2PP80 73 aa17.87■□□□□ 0.45
LSM6-202ENST00000502781 ZNF80P51504 273 aaPredicted RBP17.87■□□□□ 0.45
LSM6-202ENST00000502781 TMEM183BQ1AE95 376 aa17.87■□□□□ 0.45
LSM6-202ENST00000502781 COX8CQ7Z4L0 72 aa17.87■□□□□ 0.45
LSM6-202ENST00000502781 CBY3A6NI87 242 aa17.86■□□□□ 0.45
LSM6-202ENST00000502781 SMUG1Q53HV7 270 aa17.86■□□□□ 0.45
LSM6-202ENST00000502781 IBA57Q5T440 356 aaKnown RBP17.86■□□□□ 0.45
LSM6-202ENST00000502781 TP53TG3Q9ULZ0 132 aa17.86■□□□□ 0.45
LSM6-202ENST00000502781 ZFP30Q9Y2G7 519 aa17.86■□□□□ 0.45
LSM6-202ENST00000502781 DYNC2H1Q8NCM8 4307 aaKnown RBP17.86■□□□□ 0.45
LSM6-202ENST00000502781 GCGP01275 180 aa17.85■□□□□ 0.45
LSM6-202ENST00000502781 AKR1C3P42330 323 aa17.85■□□□□ 0.45
LSM6-202ENST00000502781 DAZ2Q13117 558 aaKnown RBP17.85■□□□□ 0.45
LSM6-202ENST00000502781 MUC21Q5SSG8 566 aa17.85■□□□□ 0.45
LSM6-202ENST00000502781 C11orf52Q96A22 123 aa17.85■□□□□ 0.45
LSM6-202ENST00000502781 NOP10Q9NPE3 64 aaKnown RBP17.85■□□□□ 0.45
LSM6-202ENST00000502781 LTAP01374 205 aa17.84■□□□□ 0.45
LSM6-202ENST00000502781 IFNA1P01562 189 aa17.84■□□□□ 0.45
LSM6-202ENST00000502781 BCL2P10415 239 aa17.84■□□□□ 0.45
LSM6-202ENST00000502781 UBE2G1P62253 170 aa17.84■□□□□ 0.45
LSM6-202ENST00000502781 LINC00612Q8N6U2 182 aa17.84■□□□□ 0.45
LSM6-202ENST00000502781 GSN-AS1Q9NRJ2 163 aa17.84■□□□□ 0.45
LSM6-202ENST00000502781 TRAV10A0A0B4J240 114 aa17.83■□□□□ 0.45
LSM6-202ENST00000502781 SNURFLB1AK76 121 aa17.83■□□□□ 0.45
LSM6-202ENST00000502781 S100A9P06702 114 aaKnown RBP17.83■□□□□ 0.45
LSM6-202ENST00000502781 PFN1P07737 140 aaKnown RBP17.83■□□□□ 0.45
LSM6-202ENST00000502781 DAD1P61803 113 aa17.83■□□□□ 0.45
LSM6-202ENST00000502781 FAM159AQ6UWV7 190 aa17.83■□□□□ 0.45
LSM6-202ENST00000502781 TAGLN2P37802 199 aaKnown RBP17.82■□□□□ 0.44
LSM6-202ENST00000502781 TCL1AP56279 114 aa17.82■□□□□ 0.44
LSM6-202ENST00000502781 MEF2BQ02080 365 aaPredicted RBP17.82■□□□□ 0.44
LSM6-202ENST00000502781 TEX261Q6UWH6 196 aa17.82■□□□□ 0.44
LSM6-202ENST00000502781 C11orf21Q9P2W6 132 aa17.82■□□□□ 0.44
LSM6-202ENST00000502781 KLK5Q9Y337 293 aaPredicted RBP17.82■□□□□ 0.44
LSM6-202ENST00000502781 TENM2Q9NT68 2774 aa17.81■□□□□ 0.44
LSM6-202ENST00000502781 VAX2Q9UIW0 290 aa17.8■□□□□ 0.44
LSM6-202ENST00000502781 TRGV11A0A075B6L2 103 aa17.79■□□□□ 0.44
LSM6-202ENST00000502781 DEFB131BA0A096LNP1 70 aa17.79■□□□□ 0.44
LSM6-202ENST00000502781 DEFB130BP0DP73 79 aa17.79■□□□□ 0.44
LSM6-202ENST00000502781 DEFB130AP0DP74 79 aa17.79■□□□□ 0.44
LSM6-202ENST00000502781 KCNS1Q96KK3 526 aa17.79■□□□□ 0.44
LSM6-202ENST00000502781 NAGKQ9UJ70 344 aa17.79■□□□□ 0.44
LSM6-202ENST00000502781 PDE6DO43924 150 aa17.79■□□□□ 0.44
LSM6-202ENST00000502781 CRIP1P50238 77 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms