RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 IGLV2-8P01709 118 aa13.65□□□□□ -0.22
HMGXB3-201ENST00000502717 DEFB121Q5J5C9 76 aa13.65□□□□□ -0.22
HMGXB3-201ENST00000502717 IL17RELQ6ZVW7 336 aa13.65□□□□□ -0.22
HMGXB3-201ENST00000502717 VMO1Q7Z5L0 202 aa13.65□□□□□ -0.22
HMGXB3-201ENST00000502717 UBE2WQ96B02 151 aa13.65□□□□□ -0.22
HMGXB3-201ENST00000502717 TRGV11A0A075B6L2 103 aa13.64□□□□□ -0.23
HMGXB3-201ENST00000502717 M0R1W7 72 aa13.64□□□□□ -0.23
HMGXB3-201ENST00000502717 IFITM1P13164 125 aa13.64□□□□□ -0.23
HMGXB3-201ENST00000502717 ZNF491Q8N8L2 437 aa13.64□□□□□ -0.23
HMGXB3-201ENST00000502717 MORN3Q6PF18 240 aaPredicted RBP13.64□□□□□ -0.23
HMGXB3-201ENST00000502717 RNASE1P07998 156 aaKnown RBP13.64□□□□□ -0.23
HMGXB3-201ENST00000502717 FXYD2P54710 66 aa13.64□□□□□ -0.23
HMGXB3-201ENST00000502717 C8orf31Q8N9H6 132 aa13.64□□□□□ -0.23
HMGXB3-201ENST00000502717 TP53TG1Q9Y2A0 90 aa13.64□□□□□ -0.23
HMGXB3-201ENST00000502717 A0A0G2JNJ9 132 aa13.63□□□□□ -0.23
HMGXB3-201ENST00000502717 ZNF876PQ49A33 203 aa13.63□□□□□ -0.23
HMGXB3-201ENST00000502717 C1orf122Q6ZSJ8 110 aa13.63□□□□□ -0.23
HMGXB3-201ENST00000502717 Q9UFV3 132 aa13.63□□□□□ -0.23
HMGXB3-201ENST00000502717 TCF15Q12870 199 aa13.63□□□□□ -0.23
HMGXB3-201ENST00000502717 ZNF503Q96F45 646 aa13.63□□□□□ -0.23
HMGXB3-201ENST00000502717 C17orf77Q96MU5 243 aa13.63□□□□□ -0.23
HMGXB3-201ENST00000502717 TRAV41A0A0B4J266 112 aa13.63□□□□□ -0.23
HMGXB3-201ENST00000502717 LOXP28300 417 aaPredicted RBP13.63□□□□□ -0.23
HMGXB3-201ENST00000502717 WFDC2Q14508 124 aa13.63□□□□□ -0.23
HMGXB3-201ENST00000502717 EGR2P11161 476 aaPredicted RBP13.62□□□□□ -0.23
HMGXB3-201ENST00000502717 KLRD1Q13241 179 aa13.62□□□□□ -0.23
HMGXB3-201ENST00000502717 NSUN5P1Q3KNT7 163 aa13.62□□□□□ -0.23
HMGXB3-201ENST00000502717 LINC01356Q8N9X3 169 aa13.62□□□□□ -0.23
HMGXB3-201ENST00000502717 SLC25A20O43772 301 aa13.62□□□□□ -0.23
HMGXB3-201ENST00000502717 GAGE5Q13069 117 aa13.62□□□□□ -0.23
HMGXB3-201ENST00000502717 GAGE6Q13070 117 aa13.62□□□□□ -0.23
HMGXB3-201ENST00000502717 DIAPH2-AS1Q14236 149 aa13.62□□□□□ -0.23
HMGXB3-201ENST00000502717 ITLN2Q8WWU7 325 aaPredicted RBP13.62□□□□□ -0.23
HMGXB3-201ENST00000502717 TIMM21Q9BVV7 248 aa13.62□□□□□ -0.23
HMGXB3-201ENST00000502717 RBMY1BA6NDE4 496 aaKnown RBP13.62□□□□□ -0.23
HMGXB3-201ENST00000502717 RBMY1EA6NEQ0 496 aaKnown RBP13.62□□□□□ -0.23
HMGXB3-201ENST00000502717 RBMY1DP0C7P1 496 aaKnown RBP13.62□□□□□ -0.23
HMGXB3-201ENST00000502717 RBMY1A1P0DJD3 496 aaKnown RBP13.62□□□□□ -0.23
HMGXB3-201ENST00000502717 RBMY1CP0DJD4 496 aa13.62□□□□□ -0.23
HMGXB3-201ENST00000502717 TRAV26-2A0A0B4J265 109 aa13.62□□□□□ -0.23
HMGXB3-201ENST00000502717 INS-IGF2F8WCM5 200 aa13.62□□□□□ -0.23
HMGXB3-201ENST00000502717 HLA-DMBP28068 263 aa13.62□□□□□ -0.23
HMGXB3-201ENST00000502717 C20orf78Q9BR46 151 aa13.62□□□□□ -0.23
HMGXB3-201ENST00000502717 PIP4P1Q86T03 277 aa13.61□□□□□ -0.23
HMGXB3-201ENST00000502717 C19orf71A6NCJ1 209 aa13.61□□□□□ -0.23
HMGXB3-201ENST00000502717 BRWD1-AS2P59051 145 aa13.61□□□□□ -0.23
HMGXB3-201ENST00000502717 SPANXDQ9BXN6 97 aa13.61□□□□□ -0.23
HMGXB3-201ENST00000502717 GAGE12JA6NER3 117 aa13.61□□□□□ -0.23
HMGXB3-201ENST00000502717 GAGE7O76087 117 aa13.61□□□□□ -0.23
HMGXB3-201ENST00000502717 GAGE12FP0CL80 117 aa13.61□□□□□ -0.23
HMGXB3-201ENST00000502717 GAGE12GP0CL81 117 aa13.61□□□□□ -0.23
HMGXB3-201ENST00000502717 GAGE12IP0CL82 117 aa13.61□□□□□ -0.23
HMGXB3-201ENST00000502717 NDPQ00604 133 aa13.61□□□□□ -0.23
HMGXB3-201ENST00000502717 GAGE4Q13068 117 aa13.61□□□□□ -0.23
HMGXB3-201ENST00000502717 IGKV3D-20A0A0C4DH25 116 aa13.61□□□□□ -0.23
HMGXB3-201ENST00000502717 CMC4P56277 68 aaPredicted RBP13.61□□□□□ -0.23
HMGXB3-201ENST00000502717 SPG11Q96JI7 2443 aa13.6□□□□□ -0.23
HMGXB3-201ENST00000502717 ADAMTS9Q9P2N4 1935 aa13.6□□□□□ -0.23
HMGXB3-201ENST00000502717 FGF6P10767 208 aa13.6□□□□□ -0.23
HMGXB3-201ENST00000502717 GATA3P23771 443 aa13.6□□□□□ -0.23
HMGXB3-201ENST00000502717 IGFL3Q6UXB1 125 aa13.6□□□□□ -0.23
HMGXB3-201ENST00000502717 PCNX3Q9H6A9 2034 aa13.6□□□□□ -0.23
HMGXB3-201ENST00000502717 TRAV8-3A0A0A6YYJ7 113 aa13.6□□□□□ -0.23
HMGXB3-201ENST00000502717 IGKV3OR2-268A0A0C4DH90 116 aa13.6□□□□□ -0.23
HMGXB3-201ENST00000502717 K7EMI3 77 aa13.6□□□□□ -0.23
HMGXB3-201ENST00000502717 GDF5OSQ5U4N7 250 aa13.6□□□□□ -0.23
HMGXB3-201ENST00000502717 DEFB104AQ8WTQ1 72 aa13.6□□□□□ -0.23
HMGXB3-201ENST00000502717 MBD6Q96DN6 1003 aa13.6□□□□□ -0.23
HMGXB3-201ENST00000502717 LHBP01229 141 aa13.59□□□□□ -0.23
HMGXB3-201ENST00000502717 TMEM131Q92545 1883 aa13.59□□□□□ -0.23
HMGXB3-201ENST00000502717 C22orf46C9J442 243 aa13.59□□□□□ -0.23
HMGXB3-201ENST00000502717 NPC2P61916 151 aa13.59□□□□□ -0.23
HMGXB3-201ENST00000502717 C11orf44Q8N8P7 122 aa13.59□□□□□ -0.23
HMGXB3-201ENST00000502717 LY6G5BQ8NDX9 201 aa13.59□□□□□ -0.23
HMGXB3-201ENST00000502717 TOMM7Q9P0U1 55 aa13.59□□□□□ -0.23
HMGXB3-201ENST00000502717 OTOGLQ3ZCN5 2332 aa13.58□□□□□ -0.23
HMGXB3-201ENST00000502717 EML6Q6ZMW3 1958 aa13.58□□□□□ -0.23
HMGXB3-201ENST00000502717 TRBV6-1A0A0K0K1D8 114 aa13.58□□□□□ -0.24
HMGXB3-201ENST00000502717 HTN3P15516 51 aa13.58□□□□□ -0.24
HMGXB3-201ENST00000502717 WFDC12Q8WWY7 111 aa13.58□□□□□ -0.24
HMGXB3-201ENST00000502717 SPXQ9BT56 116 aa13.58□□□□□ -0.24
HMGXB3-201ENST00000502717 SONP18583 2426 aaKnown RBP13.57□□□□□ -0.24
HMGXB3-201ENST00000502717 RNF223E7ERA6 249 aa13.57□□□□□ -0.24
HMGXB3-201ENST00000502717 FAM110DQ8TAY7 271 aaPredicted RBP13.57□□□□□ -0.24
HMGXB3-201ENST00000502717 TNRC6AQ8NDV7 1962 aaKnown RBP13.57□□□□□ -0.24
HMGXB3-201ENST00000502717 A0A0U1RRA0 63 aa13.57□□□□□ -0.24
HMGXB3-201ENST00000502717 CR1LQ2VPA4 569 aa13.57□□□□□ -0.24
HMGXB3-201ENST00000502717 LINC01587Q99440 93 aa13.57□□□□□ -0.24
HMGXB3-201ENST00000502717 A0A087WWL8 130 aa13.57□□□□□ -0.24
HMGXB3-201ENST00000502717 C9orf153Q5TBE3 101 aa13.56□□□□□ -0.24
HMGXB3-201ENST00000502717 EIF4EBP1Q13541 118 aaPredicted RBP13.56□□□□□ -0.24
HMGXB3-201ENST00000502717 C8orf86Q6ZUL3 223 aa13.56□□□□□ -0.24
HMGXB3-201ENST00000502717 PRSS29PA6NIE9 313 aa13.55□□□□□ -0.24
HMGXB3-201ENST00000502717 TRPT1Q86TN4 253 aaKnown RBP13.55□□□□□ -0.24
HMGXB3-201ENST00000502717 B5MCH6 92 aa13.55□□□□□ -0.24
HMGXB3-201ENST00000502717 J3QQQ9 107 aa13.55□□□□□ -0.24
HMGXB3-201ENST00000502717 LGALS1P09382 135 aaKnown RBP13.55□□□□□ -0.24
HMGXB3-201ENST00000502717 COL8A2P25067 703 aa13.55□□□□□ -0.24
HMGXB3-201ENST00000502717 LINC00527Q9UJ94 153 aa13.55□□□□□ -0.24
HMGXB3-201ENST00000502717 FAM223BA6NKX1 122 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms