RNA–Protein interactions for RNA: ENST00000498689.5

CSTF1-207, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 1 (best)

Gene CSTF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-207ENST00000498689 CNIH2Q6PI25 160 aa2.38□□□□□ -2.03
CSTF1-207ENST00000498689 LGI3Q8N145 548 aa2.38□□□□□ -2.03
CSTF1-207ENST00000498689 OR2T35Q8NGX2 323 aa2.38□□□□□ -2.03
CSTF1-207ENST00000498689 LHFPL5Q8TAF8 219 aa2.38□□□□□ -2.03
CSTF1-207ENST00000498689 ZNF2Q9BSG1 426 aaPredicted RBP2.38□□□□□ -2.03
CSTF1-207ENST00000498689 SH3BGRL3Q9H299 93 aa2.38□□□□□ -2.03
CSTF1-207ENST00000498689 MAGIXQ9H6Y5 334 aa2.38□□□□□ -2.03
CSTF1-207ENST00000498689 C8orf4Q9NR00 106 aa2.38□□□□□ -2.03
CSTF1-207ENST00000498689 SSR3Q9UNL2 185 aa2.38□□□□□ -2.03
CSTF1-207ENST00000498689 H3BRN7 92 aa2.37□□□□□ -2.03
CSTF1-207ENST00000498689 FAM107AO95990 144 aa2.37□□□□□ -2.03
CSTF1-207ENST00000498689 IGKV1-5P01602 117 aa2.37□□□□□ -2.03
CSTF1-207ENST00000498689 CTXN2P0C2S0 81 aa2.37□□□□□ -2.03
CSTF1-207ENST00000498689 BCL2P10415 239 aa2.37□□□□□ -2.03
CSTF1-207ENST00000498689 PGAM2P15259 253 aa2.37□□□□□ -2.03
CSTF1-207ENST00000498689 HIST1H1DP16402 221 aaKnown RBP2.37□□□□□ -2.03
CSTF1-207ENST00000498689 ZNF674Q2M3X9 581 aa2.37□□□□□ -2.03
CSTF1-207ENST00000498689 CCDC58Q4VC31 144 aa2.37□□□□□ -2.03
CSTF1-207ENST00000498689 C2orf83Q53S99 150 aa2.37□□□□□ -2.03
CSTF1-207ENST00000498689 EIF5AL1Q6IS14 154 aaKnown RBP2.37□□□□□ -2.03
CSTF1-207ENST00000498689 RNASEH2CQ8TDP1 164 aaKnown RBP2.37□□□□□ -2.03
CSTF1-207ENST00000498689 NUDCD2Q8WVJ2 157 aa2.37□□□□□ -2.03
CSTF1-207ENST00000498689 GPR82Q96P67 336 aa2.37□□□□□ -2.03
CSTF1-207ENST00000498689 AGPAT4-IT1Q9H0P7 198 aa2.37□□□□□ -2.03
CSTF1-207ENST00000498689 EFCAB1Q9HAE3 211 aa2.37□□□□□ -2.03
CSTF1-207ENST00000498689 NKIRAS1Q9NYS0 192 aa2.37□□□□□ -2.03
CSTF1-207ENST00000498689 TMEM272A0A1B0GTI8 110 aa2.36□□□□□ -2.03
CSTF1-207ENST00000498689 GNGT2O14610 69 aa2.36□□□□□ -2.03
CSTF1-207ENST00000498689 CTDSPLO15194 276 aa2.36□□□□□ -2.03
CSTF1-207ENST00000498689 WBP4O75554 376 aaKnown RBP2.36□□□□□ -2.03
CSTF1-207ENST00000498689 TNFAIP8O95379 198 aa2.36□□□□□ -2.03
CSTF1-207ENST00000498689 NPSP0C0P6 89 aa2.36□□□□□ -2.03
CSTF1-207ENST00000498689 MGST1P10620 155 aaKnown RBP2.36□□□□□ -2.03
CSTF1-207ENST00000498689 CRISP2P16562 243 aa2.36□□□□□ -2.03
CSTF1-207ENST00000498689 ETV1P50549 477 aa2.36□□□□□ -2.03
CSTF1-207ENST00000498689 RAB2AP61019 212 aa2.36□□□□□ -2.03
CSTF1-207ENST00000498689 REG3AQ06141 175 aa2.36□□□□□ -2.03
CSTF1-207ENST00000498689 KRTAP7-1Q8IUC3 87 aa2.36□□□□□ -2.03
CSTF1-207ENST00000498689 C3orf22Q8N5N4 141 aa2.36□□□□□ -2.03
CSTF1-207ENST00000498689 OR10R2Q8NGX6 335 aa2.36□□□□□ -2.03
CSTF1-207ENST00000498689 MRPL53Q96EL3 112 aaKnown RBP2.36□□□□□ -2.03
CSTF1-207ENST00000498689 MRPL48Q96GC5 212 aaKnown RBP2.36□□□□□ -2.03
CSTF1-207ENST00000498689 KCNS1Q96KK3 526 aa2.36□□□□□ -2.03
CSTF1-207ENST00000498689 ANXA10Q9UJ72 324 aa2.36□□□□□ -2.03
CSTF1-207ENST00000498689 AHNAKQ09666 5890 aaKnown RBP2.36□□□□□ -2.03
CSTF1-207ENST00000498689 GVQW2A0A096LPI5 108 aaPredicted RBP2.35□□□□□ -2.03
CSTF1-207ENST00000498689 A0A0G2JRQ6 117 aa2.35□□□□□ -2.03
CSTF1-207ENST00000498689 DUXBA0A1W2PPF3 345 aa2.35□□□□□ -2.03
CSTF1-207ENST00000498689 MEIS3P1A6NDR6 274 aa2.35□□□□□ -2.03
CSTF1-207ENST00000498689 SSX5O60225 188 aa2.35□□□□□ -2.03
CSTF1-207ENST00000498689 DTYMKP23919 212 aa2.35□□□□□ -2.03
CSTF1-207ENST00000498689 MAGOHP61326 146 aaKnown RBP2.35□□□□□ -2.03
CSTF1-207ENST00000498689 RBX1P62877 108 aa2.35□□□□□ -2.03
CSTF1-207ENST00000498689 CTAG1AP78358 180 aa2.35□□□□□ -2.03
CSTF1-207ENST00000498689 C2orf76Q3KRA6 126 aa2.35□□□□□ -2.03
CSTF1-207ENST00000498689 OR52I1Q8NGK6 324 aa2.35□□□□□ -2.03
CSTF1-207ENST00000498689 OR10G7Q8NGN6 311 aa2.35□□□□□ -2.03
CSTF1-207ENST00000498689 CARD19Q96LW7 228 aa2.35□□□□□ -2.03
CSTF1-207ENST00000498689 SHANK2-AS3Q9BTD1 123 aa2.35□□□□□ -2.03
CSTF1-207ENST00000498689 ENY2Q9NPA8 101 aa2.35□□□□□ -2.03
CSTF1-207ENST00000498689 SLC39A9Q9NUM3 307 aa2.35□□□□□ -2.03
CSTF1-207ENST00000498689 LOC107984640A0A0U1RRK4 108 aa2.34□□□□□ -2.03
CSTF1-207ENST00000498689 M0R3E3 92 aa2.34□□□□□ -2.03
CSTF1-207ENST00000498689 RPL7P18124 248 aaKnown RBP2.34□□□□□ -2.03
CSTF1-207ENST00000498689 TWIST1Q15672 202 aa2.34□□□□□ -2.03
CSTF1-207ENST00000498689 C10orf25Q5T742 122 aa2.34□□□□□ -2.03
CSTF1-207ENST00000498689 ETFRF1Q6IPR1 90 aa2.34□□□□□ -2.03
CSTF1-207ENST00000498689 ACOT7LQ6ZUV0 252 aa2.34□□□□□ -2.03
CSTF1-207ENST00000498689 NEXN-AS1Q8NBZ9 246 aa2.34□□□□□ -2.03
CSTF1-207ENST00000498689 OR13C8Q8NGS7 320 aa2.34□□□□□ -2.03
CSTF1-207ENST00000498689 OR2G3Q8NGZ4 309 aa2.34□□□□□ -2.03
CSTF1-207ENST00000498689 UFD1Q92890 307 aa2.34□□□□□ -2.03
CSTF1-207ENST00000498689 TRGV9Q99603 122 aa2.34□□□□□ -2.03
CSTF1-207ENST00000498689 CHCHD5Q9BSY4 110 aa2.34□□□□□ -2.03
CSTF1-207ENST00000498689 TMEM147Q9BVK8 224 aa2.34□□□□□ -2.03
CSTF1-207ENST00000498689 HEYLQ9NQ87 328 aaPredicted RBP2.34□□□□□ -2.03
CSTF1-207ENST00000498689 TRBV6-8A0A0A6YYG3 113 aa2.33□□□□□ -2.04
CSTF1-207ENST00000498689 RBAKDNA6NC62 111 aa2.33□□□□□ -2.04
CSTF1-207ENST00000498689 PGPEP1LA6NFU8 196 aa2.33□□□□□ -2.04
CSTF1-207ENST00000498689 C9orf92A6NGG3 77 aa2.33□□□□□ -2.04
CSTF1-207ENST00000498689 K7EPK0 472 aa2.33□□□□□ -2.04
CSTF1-207ENST00000498689 TYMSP04818 313 aa2.33□□□□□ -2.04
CSTF1-207ENST00000498689 TAS2R20P59543 309 aa2.33□□□□□ -2.04
CSTF1-207ENST00000498689 ARPC4P59998 168 aa2.33□□□□□ -2.04
CSTF1-207ENST00000498689 RPP30P78346 268 aaKnown RBP2.33□□□□□ -2.04
CSTF1-207ENST00000498689 RPL18AQ02543 176 aaKnown RBP2.33□□□□□ -2.04
CSTF1-207ENST00000498689 GAGE6Q13070 117 aa2.33□□□□□ -2.04
CSTF1-207ENST00000498689 SURF2Q15527 256 aaPredicted RBP2.33□□□□□ -2.04
CSTF1-207ENST00000498689 PHLDA2Q53GA4 152 aa2.33□□□□□ -2.04
CSTF1-207ENST00000498689 ZNF506Q5JVG8 444 aa2.33□□□□□ -2.04
CSTF1-207ENST00000498689 LCN15Q6UWW0 184 aa2.33□□□□□ -2.04
CSTF1-207ENST00000498689 FAM19A5Q7Z5A7 132 aaPredicted RBP2.33□□□□□ -2.04
CSTF1-207ENST00000498689 DNAJC9Q8WXX5 260 aa2.33□□□□□ -2.04
CSTF1-207ENST00000498689 FAM3DQ96BQ1 224 aa2.33□□□□□ -2.04
CSTF1-207ENST00000498689 MGLLQ99685 303 aa2.33□□□□□ -2.04
CSTF1-207ENST00000498689 SRRQ9GZT4 340 aa2.33□□□□□ -2.04
CSTF1-207ENST00000498689 MIXL1Q9H2W2 232 aa2.33□□□□□ -2.04
CSTF1-207ENST00000498689 JPT2Q9H910 190 aa2.33□□□□□ -2.04
CSTF1-207ENST00000498689 PLGRKTQ9HBL7 147 aa2.33□□□□□ -2.04
CSTF1-207ENST00000498689 FGFR1OP2Q9NVK5 253 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 306.9 ms