RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 C5orf17Q8NAS9 161 aa9.06□□□□□ -0.96
HSPG2-213ENST00000498495 ZNF680Q8NEM1 530 aa9.06□□□□□ -0.96
HSPG2-213ENST00000498495 TRAV8-1A0A0A6YYK1 113 aa9.05□□□□□ -0.96
HSPG2-213ENST00000498495 A0A1W2PRE2 83 aa9.05□□□□□ -0.96
HSPG2-213ENST00000498495 GAGE12BA1L429 117 aa9.05□□□□□ -0.96
HSPG2-213ENST00000498495 BCL2L11O43521 198 aa9.05□□□□□ -0.96
HSPG2-213ENST00000498495 PFDN1O60925 122 aa9.05□□□□□ -0.96
HSPG2-213ENST00000498495 GAGE7O76087 117 aa9.05□□□□□ -0.96
HSPG2-213ENST00000498495 TCRAP04437 139 aa9.05□□□□□ -0.96
HSPG2-213ENST00000498495 SEC11BP0C7V7 166 aa9.05□□□□□ -0.96
HSPG2-213ENST00000498495 GAGE12FP0CL80 117 aa9.05□□□□□ -0.96
HSPG2-213ENST00000498495 GAGE12GP0CL81 117 aa9.05□□□□□ -0.96
HSPG2-213ENST00000498495 GAGE12IP0CL82 117 aa9.05□□□□□ -0.96
HSPG2-213ENST00000498495 FGF8P55075 233 aaPredicted RBP9.05□□□□□ -0.96
HSPG2-213ENST00000498495 DAZ2Q13117 558 aaKnown RBP9.05□□□□□ -0.96
HSPG2-213ENST00000498495 Q6ZQT7 251 aa9.05□□□□□ -0.96
HSPG2-213ENST00000498495 TMUB2Q71RG4 321 aa9.05□□□□□ -0.96
HSPG2-213ENST00000498495 STOML3Q8TAV4 291 aa9.05□□□□□ -0.96
HSPG2-213ENST00000498495 SGK494Q96LW2 274 aa9.05□□□□□ -0.96
HSPG2-213ENST00000498495 LYSTQ99698 3801 aa9.05□□□□□ -0.96
HSPG2-213ENST00000498495 TMPRSS5Q9H3S3 457 aa9.05□□□□□ -0.96
HSPG2-213ENST00000498495 TREM1Q9NP99 234 aa9.05□□□□□ -0.96
HSPG2-213ENST00000498495 GSN-AS1Q9NRJ2 163 aa9.05□□□□□ -0.96
HSPG2-213ENST00000498495 EPDR1Q9UM22 224 aa9.05□□□□□ -0.96
HSPG2-213ENST00000498495 P0DMU3 169 aa9.04□□□□□ -0.96
HSPG2-213ENST00000498495 FAM231AP0DMU4 169 aa9.04□□□□□ -0.96
HSPG2-213ENST00000498495 FAM231CP0DMU5 169 aa9.04□□□□□ -0.96
HSPG2-213ENST00000498495 MUC21Q5SSG8 566 aa9.04□□□□□ -0.96
HSPG2-213ENST00000498495 Q6AWC8 147 aa9.04□□□□□ -0.96
HSPG2-213ENST00000498495 TMEM88Q6PEY1 159 aa9.04□□□□□ -0.96
HSPG2-213ENST00000498495 FAM159AQ6UWV7 190 aa9.04□□□□□ -0.96
HSPG2-213ENST00000498495 NDFIP1Q9BT67 221 aa9.04□□□□□ -0.96
HSPG2-213ENST00000498495 TP53TG3Q9ULZ0 132 aa9.04□□□□□ -0.96
HSPG2-213ENST00000498495 MAP1LC3B2A6NCE7 125 aa9.03□□□□□ -0.96
HSPG2-213ENST00000498495 UMAD1C9J7I0 102 aa9.03□□□□□ -0.96
HSPG2-213ENST00000498495 IFNA7P01567 189 aa9.03□□□□□ -0.96
HSPG2-213ENST00000498495 UBE2G2P60604 165 aa9.03□□□□□ -0.96
HSPG2-213ENST00000498495 IBA57Q5T440 356 aaKnown RBP9.03□□□□□ -0.96
HSPG2-213ENST00000498495 TCTE3Q8IZS6 198 aa9.03□□□□□ -0.96
HSPG2-213ENST00000498495 LINC00612Q8N6U2 182 aa9.03□□□□□ -0.96
HSPG2-213ENST00000498495 C11orf72Q8NBR9 251 aa9.03□□□□□ -0.96
HSPG2-213ENST00000498495 NKX6-2Q9C056 277 aaPredicted RBP9.03□□□□□ -0.96
HSPG2-213ENST00000498495 MAP1LC3BQ9GZQ8 125 aa9.03□□□□□ -0.96
HSPG2-213ENST00000498495 PSG8Q9UQ74 426 aa9.03□□□□□ -0.96
HSPG2-213ENST00000498495 KLF12Q9Y4X4 402 aa9.03□□□□□ -0.96
HSPG2-213ENST00000498495 TRAV21A0A0B4J279 112 aa9.02□□□□□ -0.97
HSPG2-213ENST00000498495 FBLL1A6NHQ2 334 aaKnown RBP9.02□□□□□ -0.97
HSPG2-213ENST00000498495 GGTLC3B5MD39 225 aa9.02□□□□□ -0.97
HSPG2-213ENST00000498495 TPT1P13693 172 aaKnown RBP9.02□□□□□ -0.97
HSPG2-213ENST00000498495 FHITP49789 147 aa9.02□□□□□ -0.97
HSPG2-213ENST00000498495 TCL1AP56279 114 aa9.02□□□□□ -0.97
HSPG2-213ENST00000498495 FLI1Q01543 452 aaPredicted RBP9.02□□□□□ -0.97
HSPG2-213ENST00000498495 OR5I1Q13606 314 aa9.02□□□□□ -0.97
HSPG2-213ENST00000498495 LGALSLQ3ZCW2 172 aaPredicted RBP9.02□□□□□ -0.97
HSPG2-213ENST00000498495 Q6ZTI0 123 aa9.02□□□□□ -0.97
HSPG2-213ENST00000498495 CYB561D1Q8N8Q1 229 aa9.02□□□□□ -0.97
HSPG2-213ENST00000498495 C15orf53Q8NAA6 179 aa9.02□□□□□ -0.97
HSPG2-213ENST00000498495 TVP23CQ96ET8 276 aa9.02□□□□□ -0.97
HSPG2-213ENST00000498495 TRGV2A0A075B6R0 118 aa9.01□□□□□ -0.97
HSPG2-213ENST00000498495 TRGV1A0A0A0MS02 117 aa9.01□□□□□ -0.97
HSPG2-213ENST00000498495 FAM74A7A6NL05 159 aa9.01□□□□□ -0.97
HSPG2-213ENST00000498495 F6UZH7 168 aa9.01□□□□□ -0.97
HSPG2-213ENST00000498495 ZNF415Q09FC8 603 aa9.01□□□□□ -0.97
HSPG2-213ENST00000498495 PRNTQ86SH4 94 aa9.01□□□□□ -0.97
HSPG2-213ENST00000498495 POM121L12Q8N7R1 296 aa9.01□□□□□ -0.97
HSPG2-213ENST00000498495 FAM213BQ8TBF2 198 aa9.01□□□□□ -0.97
HSPG2-213ENST00000498495 SFT2D1Q8WV19 159 aa9.01□□□□□ -0.97
HSPG2-213ENST00000498495 ATG101Q9BSB4 218 aa9.01□□□□□ -0.97
HSPG2-213ENST00000498495 NAGKQ9UJ70 344 aa9.01□□□□□ -0.97
HSPG2-213ENST00000498495 ALMS1Q8TCU4 4167 aa9.01□□□□□ -0.97
HSPG2-213ENST00000498495 RYR2Q92736 4967 aa9.01□□□□□ -0.97
HSPG2-213ENST00000498495 DNAH1Q9P2D7 4330 aa9□□□□□ -0.97
HSPG2-213ENST00000498495 hCG_2014768A0A024R1R8 64 aa9□□□□□ -0.97
HSPG2-213ENST00000498495 TRGV11A0A075B6L2 103 aa9□□□□□ -0.97
HSPG2-213ENST00000498495 SPINK4O60575 86 aa9□□□□□ -0.97
HSPG2-213ENST00000498495 NUDT3O95989 172 aa9□□□□□ -0.97
HSPG2-213ENST00000498495 PPT1P50897 306 aa9□□□□□ -0.97
HSPG2-213ENST00000498495 TMEM183BQ1AE95 376 aa9□□□□□ -0.97
HSPG2-213ENST00000498495 LGALS9BQ3B8N2 356 aa9□□□□□ -0.97
HSPG2-213ENST00000498495 SAPCD1Q5SSQ6 148 aa9□□□□□ -0.97
HSPG2-213ENST00000498495 DPPA3Q6W0C5 159 aa9□□□□□ -0.97
HSPG2-213ENST00000498495 UBE2DNLQ8IWF7 75 aa9□□□□□ -0.97
HSPG2-213ENST00000498495 TMEM183AQ8IXX5 376 aa9□□□□□ -0.97
HSPG2-213ENST00000498495 TMEM75Q8N9X5 138 aa9□□□□□ -0.97
HSPG2-213ENST00000498495 MBD3L1Q8WWY6 194 aa9□□□□□ -0.97
HSPG2-213ENST00000498495 C8orf49Q96NF6 230 aa9□□□□□ -0.97
HSPG2-213ENST00000498495 MDFICQ9P1T7 246 aa9□□□□□ -0.97
HSPG2-213ENST00000498495 HYDINQ4G0P3 5121 aa8.99□□□□□ -0.97
HSPG2-213ENST00000498495 GNRH2O43555 120 aa8.99□□□□□ -0.97
HSPG2-213ENST00000498495 IGLV2-11P01706 119 aa8.99□□□□□ -0.97
HSPG2-213ENST00000498495 C1QBP02746 253 aa8.99□□□□□ -0.97
HSPG2-213ENST00000498495 H2AFB1P0C5Y9 115 aa8.99□□□□□ -0.97
HSPG2-213ENST00000498495 ZFP69Q49AA0 526 aa8.99□□□□□ -0.97
HSPG2-213ENST00000498495 SMUG1Q53HV7 270 aa8.99□□□□□ -0.97
HSPG2-213ENST00000498495 CST9LP1Q5W188 147 aa8.99□□□□□ -0.97
HSPG2-213ENST00000498495 EIF5AL1Q6IS14 154 aaKnown RBP8.99□□□□□ -0.97
HSPG2-213ENST00000498495 AKAP14Q86UN6 197 aa8.99□□□□□ -0.97
HSPG2-213ENST00000498495 HIST1H2BAQ96A08 127 aa8.99□□□□□ -0.97
HSPG2-213ENST00000498495 KCNS1Q96KK3 526 aa8.99□□□□□ -0.97
HSPG2-213ENST00000498495 LINC00479Q96M42 142 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms