RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 ZNF586Q9NXT0 402 aa4.04□□□□□ -1.76
HMGXB4-208ENST00000498325 CLEC5AQ9NY25 188 aa4.04□□□□□ -1.76
HMGXB4-208ENST00000498325 UBR4Q5T4S7 5183 aa4.04□□□□□ -1.76
HMGXB4-208ENST00000498325 A0A087X0K7 114 aa4.03□□□□□ -1.76
HMGXB4-208ENST00000498325 TGIF2-C20orf24A0A0A6YYL0 155 aa4.03□□□□□ -1.76
HMGXB4-208ENST00000498325 A0A1B0GV90 55 aa4.03□□□□□ -1.76
HMGXB4-208ENST00000498325 SERTM2A0A1B0GWG4 89 aa4.03□□□□□ -1.76
HMGXB4-208ENST00000498325 ZNF320A2RRD8 509 aa4.03□□□□□ -1.76
HMGXB4-208ENST00000498325 FBLL1A6NHQ2 334 aaKnown RBP4.03□□□□□ -1.76
HMGXB4-208ENST00000498325 K7EMT4 169 aa4.03□□□□□ -1.76
HMGXB4-208ENST00000498325 PEX7O00628 323 aa4.03□□□□□ -1.76
HMGXB4-208ENST00000498325 PHOX2AO14813 284 aa4.03□□□□□ -1.76
HMGXB4-208ENST00000498325 MRPS12O15235 138 aaKnown RBP4.03□□□□□ -1.76
HMGXB4-208ENST00000498325 TCAPO15273 167 aa4.03□□□□□ -1.76
HMGXB4-208ENST00000498325 BUB3O43684 328 aa4.03□□□□□ -1.76
HMGXB4-208ENST00000498325 TYMSP04818 313 aa4.03□□□□□ -1.76
HMGXB4-208ENST00000498325 SNRPCP09234 159 aaKnown RBP4.03□□□□□ -1.76
HMGXB4-208ENST00000498325 LGALS1P09382 135 aaKnown RBP4.03□□□□□ -1.76
HMGXB4-208ENST00000498325 IGLC2P0DOY2 106 aa4.03□□□□□ -1.76
HMGXB4-208ENST00000498325 FABP4P15090 132 aa4.03□□□□□ -1.76
HMGXB4-208ENST00000498325 BTF3P20290 206 aaKnown RBP4.03□□□□□ -1.76
HMGXB4-208ENST00000498325 MYCNOSP40205 109 aa4.03□□□□□ -1.76
HMGXB4-208ENST00000498325 HILS1P60008 231 aa4.03□□□□□ -1.76
HMGXB4-208ENST00000498325 NUTF2P61970 127 aaKnown RBP4.03□□□□□ -1.76
HMGXB4-208ENST00000498325 TMEM183BQ1AE95 376 aa4.03□□□□□ -1.76
HMGXB4-208ENST00000498325 RPEL1Q2QD12 228 aa4.03□□□□□ -1.76
HMGXB4-208ENST00000498325 Q6ZSV7 163 aa4.03□□□□□ -1.76
HMGXB4-208ENST00000498325 LINC01551Q86U37 167 aa4.03□□□□□ -1.76
HMGXB4-208ENST00000498325 GPHB5Q86YW7 130 aa4.03□□□□□ -1.76
HMGXB4-208ENST00000498325 KLHDC1Q8N7A1 406 aa4.03□□□□□ -1.76
HMGXB4-208ENST00000498325 OCC1Q8TAD7 63 aa4.03□□□□□ -1.76
HMGXB4-208ENST00000498325 FRZBQ92765 325 aa4.03□□□□□ -1.76
HMGXB4-208ENST00000498325 TMEM18Q96B42 140 aa4.03□□□□□ -1.76
HMGXB4-208ENST00000498325 SMIM12Q96EX1 92 aa4.03□□□□□ -1.76
HMGXB4-208ENST00000498325 FMC1Q96HJ9 113 aa4.03□□□□□ -1.76
HMGXB4-208ENST00000498325 IMMP2LQ96T52 175 aa4.03□□□□□ -1.76
HMGXB4-208ENST00000498325 SLC50A1Q9BRV3 221 aa4.03□□□□□ -1.76
HMGXB4-208ENST00000498325 ATG101Q9BSB4 218 aa4.03□□□□□ -1.76
HMGXB4-208ENST00000498325 DERL1Q9BUN8 251 aa4.03□□□□□ -1.76
HMGXB4-208ENST00000498325 SERTAD4Q9NUC0 356 aa4.03□□□□□ -1.76
HMGXB4-208ENST00000498325 UFC1Q9Y3C8 167 aa4.03□□□□□ -1.76
HMGXB4-208ENST00000498325 TENM2Q9NT68 2774 aa4.02□□□□□ -1.77
HMGXB4-208ENST00000498325 IGHV3OR16-8A0A075B7F1 116 aa4.02□□□□□ -1.77
HMGXB4-208ENST00000498325 TRBV6-1A0A0K0K1D8 114 aa4.02□□□□□ -1.77
HMGXB4-208ENST00000498325 CLPSL1A2RUU4 121 aa4.02□□□□□ -1.77
HMGXB4-208ENST00000498325 H3BTX0 84 aa4.02□□□□□ -1.77
HMGXB4-208ENST00000498325 H7BYZ3 331 aa4.02□□□□□ -1.77
HMGXB4-208ENST00000498325 M0R143 59 aa4.02□□□□□ -1.77
HMGXB4-208ENST00000498325 ZNF207O43670 478 aaKnown RBP4.02□□□□□ -1.77
HMGXB4-208ENST00000498325 AMBPP02760 352 aa4.02□□□□□ -1.77
HMGXB4-208ENST00000498325 TCRAP04437 139 aa4.02□□□□□ -1.77
HMGXB4-208ENST00000498325 GZMBP10144 247 aa4.02□□□□□ -1.77
HMGXB4-208ENST00000498325 RPL19P84098 196 aaKnown RBP4.02□□□□□ -1.77
HMGXB4-208ENST00000498325 CENPWQ5EE01 88 aa4.02□□□□□ -1.77
HMGXB4-208ENST00000498325 KCNIP4Q6PIL6 250 aa4.02□□□□□ -1.77
HMGXB4-208ENST00000498325 C16orf54Q6UWD8 224 aa4.02□□□□□ -1.77
HMGXB4-208ENST00000498325 SIGLEC15Q6ZMC9 328 aa4.02□□□□□ -1.77
HMGXB4-208ENST00000498325 BAGE2Q86Y30 109 aa4.02□□□□□ -1.77
HMGXB4-208ENST00000498325 EXOC3-AS1Q8N2X6 119 aa4.02□□□□□ -1.77
HMGXB4-208ENST00000498325 OR10G8Q8NGN5 311 aa4.02□□□□□ -1.77
HMGXB4-208ENST00000498325 MYOZ3Q8TDC0 251 aa4.02□□□□□ -1.77
HMGXB4-208ENST00000498325 C17orf77Q96MU5 243 aa4.02□□□□□ -1.77
HMGXB4-208ENST00000498325 C1orf43Q9BWL3 253 aa4.02□□□□□ -1.77
HMGXB4-208ENST00000498325 C16orf95Q9H693 158 aa4.02□□□□□ -1.77
HMGXB4-208ENST00000498325 ESM1Q9NQ30 184 aa4.02□□□□□ -1.77
HMGXB4-208ENST00000498325 RPH3ALQ9UNE2 315 aa4.02□□□□□ -1.77
HMGXB4-208ENST00000498325 CBY1Q9Y3M2 126 aa4.02□□□□□ -1.77
HMGXB4-208ENST00000498325 KLF12Q9Y4X4 402 aa4.02□□□□□ -1.77
HMGXB4-208ENST00000498325 URGCP-MRPS24S4R325 110 aa4.02□□□□□ -1.77
HMGXB4-208ENST00000498325 TRAV9-1A0A075B6T8 112 aa4.01□□□□□ -1.77
HMGXB4-208ENST00000498325 A0A087WWL8 130 aa4.01□□□□□ -1.77
HMGXB4-208ENST00000498325 IGHV7-4-1A0A0J9YVY3 117 aa4.01□□□□□ -1.77
HMGXB4-208ENST00000498325 LGALS9O00182 355 aa4.01□□□□□ -1.77
HMGXB4-208ENST00000498325 NDUFA7O95182 113 aa4.01□□□□□ -1.77
HMGXB4-208ENST00000498325 TRBV12-3P01733 135 aa4.01□□□□□ -1.77
HMGXB4-208ENST00000498325 PFN1P07737 140 aaKnown RBP4.01□□□□□ -1.77
HMGXB4-208ENST00000498325 MGST1P10620 155 aaKnown RBP4.01□□□□□ -1.77
HMGXB4-208ENST00000498325 ERVFC1-1P60608 527 aa4.01□□□□□ -1.77
HMGXB4-208ENST00000498325 GNG5P63218 68 aa4.01□□□□□ -1.77
HMGXB4-208ENST00000498325 GAGE1Q13065 139 aa4.01□□□□□ -1.77
HMGXB4-208ENST00000498325 SAMD13Q5VXD3 122 aa4.01□□□□□ -1.77
HMGXB4-208ENST00000498325 C10orf99Q6UWK7 81 aa4.01□□□□□ -1.77
HMGXB4-208ENST00000498325 GOLT1AQ6ZVE7 132 aa4.01□□□□□ -1.77
HMGXB4-208ENST00000498325 ZNF664Q8N3J9 261 aa4.01□□□□□ -1.77
HMGXB4-208ENST00000498325 TMEM75Q8N9X5 138 aa4.01□□□□□ -1.77
HMGXB4-208ENST00000498325 MRPL53Q96EL3 112 aaKnown RBP4.01□□□□□ -1.77
HMGXB4-208ENST00000498325 DAZAP1Q96EP5 407 aaKnown RBP4.01□□□□□ -1.77
HMGXB4-208ENST00000498325 SFRP2Q96HF1 295 aa4.01□□□□□ -1.77
HMGXB4-208ENST00000498325 IGF2BP2-AS1Q96M15 143 aa4.01□□□□□ -1.77
HMGXB4-208ENST00000498325 RHPN1-AS1Q9BWJ2 59 aa4.01□□□□□ -1.77
HMGXB4-208ENST00000498325 ZNF331Q9NQX6 463 aaPredicted RBP4.01□□□□□ -1.77
HMGXB4-208ENST00000498325 DAZ1Q9NQZ3 744 aaKnown RBP4.01□□□□□ -1.77
HMGXB4-208ENST00000498325 OSTCQ9NRP0 149 aa4.01□□□□□ -1.77
HMGXB4-208ENST00000498325 PEMTQ9UBM1 199 aa4.01□□□□□ -1.77
HMGXB4-208ENST00000498325 SMPXQ9UHP9 88 aa4.01□□□□□ -1.77
HMGXB4-208ENST00000498325 ZFP30Q9Y2G7 519 aa4.01□□□□□ -1.77
HMGXB4-208ENST00000498325 SMAD5-AS1Q9Y6J3 95 aa4.01□□□□□ -1.77
HMGXB4-208ENST00000498325 DNAH9Q9NYC9 4486 aa4.01□□□□□ -1.77
HMGXB4-208ENST00000498325 TRBV20OR9-2A0A075B6H5 130 aa4□□□□□ -1.77
HMGXB4-208ENST00000498325 IGHV3OR16-13A0A075B7E8 117 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms