RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 CYB561D1Q8N8Q1 229 aa10.95□□□□□ -0.66
NUP50-219ENST00000497960 LINC00477Q96M19 166 aa10.95□□□□□ -0.66
NUP50-219ENST00000497960 ODF3Q96PU9 254 aa10.95□□□□□ -0.66
NUP50-219ENST00000497960 ATG101Q9BSB4 218 aa10.95□□□□□ -0.66
NUP50-219ENST00000497960 HYDINQ4G0P3 5121 aa10.94□□□□□ -0.66
NUP50-219ENST00000497960 ZNF705GA8MUZ8 300 aaPredicted RBP10.94□□□□□ -0.66
NUP50-219ENST00000497960 J3KRW8 73 aa10.94□□□□□ -0.66
NUP50-219ENST00000497960 PEX7O00628 323 aa10.94□□□□□ -0.66
NUP50-219ENST00000497960 CT45A10P0DMU9 189 aa10.94□□□□□ -0.66
NUP50-219ENST00000497960 CCL20P78556 96 aa10.94□□□□□ -0.66
NUP50-219ENST00000497960 ZNF680Q8NEM1 530 aa10.94□□□□□ -0.66
NUP50-219ENST00000497960 LINC01587Q99440 93 aa10.94□□□□□ -0.66
NUP50-219ENST00000497960 NDUFAF3Q9BU61 184 aa10.94□□□□□ -0.66
NUP50-219ENST00000497960 AGPAT4-IT1Q9H0P7 198 aa10.94□□□□□ -0.66
NUP50-219ENST00000497960 EPDR1Q9UM22 224 aa10.94□□□□□ -0.66
NUP50-219ENST00000497960 ZNF138P52744 262 aa10.93□□□□□ -0.66
NUP50-219ENST00000497960 TCEAL7Q9BRU2 100 aa10.93□□□□□ -0.66
NUP50-219ENST00000497960 ZNF492Q9P255 531 aa10.93□□□□□ -0.66
NUP50-219ENST00000497960 TRAV8-1A0A0A6YYK1 113 aa10.92□□□□□ -0.66
NUP50-219ENST00000497960 F6UZH7 168 aa10.92□□□□□ -0.66
NUP50-219ENST00000497960 BCL2P10415 239 aa10.92□□□□□ -0.66
NUP50-219ENST00000497960 AKR1C3P42330 323 aa10.92□□□□□ -0.66
NUP50-219ENST00000497960 TAS2R60P59551 318 aa10.92□□□□□ -0.66
NUP50-219ENST00000497960 DAD1P61803 113 aa10.92□□□□□ -0.66
NUP50-219ENST00000497960 TMEM75Q8N9X5 138 aa10.92□□□□□ -0.66
NUP50-219ENST00000497960 HIST1H2BAQ96A08 127 aa10.92□□□□□ -0.66
NUP50-219ENST00000497960 NDFIP1Q9BT67 221 aa10.92□□□□□ -0.66
NUP50-219ENST00000497960 SCO2A0A1W2PP80 73 aa10.91□□□□□ -0.66
NUP50-219ENST00000497960 LYRM9A8MSI8 78 aa10.91□□□□□ -0.66
NUP50-219ENST00000497960 PRM2P04554 102 aa10.91□□□□□ -0.66
NUP50-219ENST00000497960 HTN1P15515 57 aa10.91□□□□□ -0.66
NUP50-219ENST00000497960 HTN3P15516 51 aa10.91□□□□□ -0.66
NUP50-219ENST00000497960 UBE2G1P62253 170 aa10.91□□□□□ -0.66
NUP50-219ENST00000497960 FAM210BQ96KR6 192 aa10.91□□□□□ -0.66
NUP50-219ENST00000497960 SGK494Q96LW2 274 aa10.91□□□□□ -0.66
NUP50-219ENST00000497960 H7BYZ3 331 aa10.9□□□□□ -0.66
NUP50-219ENST00000497960 TAGLN2P37802 199 aaKnown RBP10.9□□□□□ -0.66
NUP50-219ENST00000497960 FLI1Q01543 452 aaPredicted RBP10.9□□□□□ -0.66
NUP50-219ENST00000497960 GFI1BQ5VTD9 330 aa10.9□□□□□ -0.66
NUP50-219ENST00000497960 CCDC28AQ8IWP9 274 aa10.9□□□□□ -0.66
NUP50-219ENST00000497960 PCNPQ8WW12 178 aaKnown RBP10.9□□□□□ -0.66
NUP50-219ENST00000497960 FAM19A4Q96LR4 140 aa10.9□□□□□ -0.66
NUP50-219ENST00000497960 C20orf144Q9BQM9 153 aa10.9□□□□□ -0.66
NUP50-219ENST00000497960 LENEPQ9Y5L5 61 aa10.9□□□□□ -0.66
NUP50-219ENST00000497960 TRAV34A0A0B4J273 112 aa10.89□□□□□ -0.67
NUP50-219ENST00000497960 C7orf71A4D174 169 aa10.89□□□□□ -0.67
NUP50-219ENST00000497960 FBLL1A6NHQ2 334 aaKnown RBP10.89□□□□□ -0.67
NUP50-219ENST00000497960 GPX1P07203 203 aa10.89□□□□□ -0.67
NUP50-219ENST00000497960 P0DMU3 169 aa10.89□□□□□ -0.67
NUP50-219ENST00000497960 FAM231AP0DMU4 169 aa10.89□□□□□ -0.67
NUP50-219ENST00000497960 FAM231CP0DMU5 169 aa10.89□□□□□ -0.67
NUP50-219ENST00000497960 CRISP2P16562 243 aa10.89□□□□□ -0.67
NUP50-219ENST00000497960 AZU1P20160 251 aa10.89□□□□□ -0.67
NUP50-219ENST00000497960 MEF2BQ02080 365 aaPredicted RBP10.89□□□□□ -0.67
NUP50-219ENST00000497960 BTN1A1Q13410 526 aa10.89□□□□□ -0.67
NUP50-219ENST00000497960 KIR3DS1Q14943 382 aa10.89□□□□□ -0.67
NUP50-219ENST00000497960 PRNTQ86SH4 94 aa10.89□□□□□ -0.67
NUP50-219ENST00000497960 Q86TA4 180 aa10.89□□□□□ -0.67
NUP50-219ENST00000497960 LYPD6BQ8NI32 183 aa10.89□□□□□ -0.67
NUP50-219ENST00000497960 C16orf74Q96GX8 76 aa10.89□□□□□ -0.67
NUP50-219ENST00000497960 TXNDC17Q9BRA2 123 aa10.89□□□□□ -0.67
NUP50-219ENST00000497960 PSG8Q9UQ74 426 aa10.89□□□□□ -0.67
NUP50-219ENST00000497960 TRBV7-9A0A0J9YWB2 115 aa10.88□□□□□ -0.67
NUP50-219ENST00000497960 KLLNB2CW77 178 aa10.88□□□□□ -0.67
NUP50-219ENST00000497960 ZNF493Q6ZR52 646 aa10.88□□□□□ -0.67
NUP50-219ENST00000497960 ZFAND2AQ8N6M9 145 aa10.88□□□□□ -0.67
NUP50-219ENST00000497960 FMC1Q96HJ9 113 aa10.88□□□□□ -0.67
NUP50-219ENST00000497960 TREM1Q9NP99 234 aa10.88□□□□□ -0.67
NUP50-219ENST00000497960 VAX2Q9UIW0 290 aa10.88□□□□□ -0.67
NUP50-219ENST00000497960 TRAV12-3A0A0B4J271 114 aa10.87□□□□□ -0.67
NUP50-219ENST00000497960 PDE6DO43924 150 aa10.87□□□□□ -0.67
NUP50-219ENST00000497960 NMBP08949 121 aa10.87□□□□□ -0.67
NUP50-219ENST00000497960 DEFB130BP0DP73 79 aa10.87□□□□□ -0.67
NUP50-219ENST00000497960 DEFB130AP0DP74 79 aa10.87□□□□□ -0.67
NUP50-219ENST00000497960 RNASE4P34096 147 aaKnown RBP10.87□□□□□ -0.67
NUP50-219ENST00000497960 TOR2AQ5JU69 321 aa10.87□□□□□ -0.67
NUP50-219ENST00000497960 PRR9Q5T870 116 aa10.87□□□□□ -0.67
NUP50-219ENST00000497960 LINC00479Q96M42 142 aa10.87□□□□□ -0.67
NUP50-219ENST00000497960 PLAC8L1A1L4L8 177 aa10.86□□□□□ -0.67
NUP50-219ENST00000497960 RBFOX3A6NFN3 312 aa10.86□□□□□ -0.67
NUP50-219ENST00000497960 IGLV2-11P01706 119 aa10.86□□□□□ -0.67
NUP50-219ENST00000497960 RAB14P61106 215 aa10.86□□□□□ -0.67
NUP50-219ENST00000497960 POM121L12Q8N7R1 296 aa10.86□□□□□ -0.67
NUP50-219ENST00000497960 TMEM263Q8WUH6 116 aaKnown RBP10.86□□□□□ -0.67
NUP50-219ENST00000497960 C11orf52Q96A22 123 aa10.86□□□□□ -0.67
NUP50-219ENST00000497960 C8orf49Q96NF6 230 aa10.86□□□□□ -0.67
NUP50-219ENST00000497960 TIMM8BQ9Y5J9 83 aaPredicted RBP10.86□□□□□ -0.67
NUP50-219ENST00000497960 TMEM183BQ1AE95 376 aa10.85□□□□□ -0.67
NUP50-219ENST00000497960 ZNF506Q5JVG8 444 aa10.85□□□□□ -0.67
NUP50-219ENST00000497960 RNASE8Q8TDE3 154 aaKnown RBP10.85□□□□□ -0.67
NUP50-219ENST00000497960 TVP23CQ96ET8 276 aa10.85□□□□□ -0.67
NUP50-219ENST00000497960 FAM210AQ96ND0 272 aa10.85□□□□□ -0.67
NUP50-219ENST00000497960 EIF5A2Q9GZV4 153 aaKnown RBP10.85□□□□□ -0.67
NUP50-219ENST00000497960 S100A9P06702 114 aaKnown RBP10.84□□□□□ -0.67
NUP50-219ENST00000497960 SMUG1Q53HV7 270 aa10.84□□□□□ -0.67
NUP50-219ENST00000497960 SAPCD1Q5SSQ6 148 aa10.84□□□□□ -0.67
NUP50-219ENST00000497960 TMEM88Q6PEY1 159 aa10.84□□□□□ -0.67
NUP50-219ENST00000497960 UBE2DNLQ8IWF7 75 aa10.84□□□□□ -0.67
NUP50-219ENST00000497960 PYGO2Q9BRQ0 406 aa10.84□□□□□ -0.67
NUP50-219ENST00000497960 NOP10Q9NPE3 64 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms