RNA–Protein interactions for RNA: ENST00000497026.5

CSMD3-208, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 1,406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-208ENST00000497026 MINOS1Q5TGZ0 78 aa3.83□□□□□ -1.8
CSMD3-208ENST00000497026 SLC35E4Q6ICL7 350 aa3.83□□□□□ -1.8
CSMD3-208ENST00000497026 LCN12Q6JVE5 192 aa3.83□□□□□ -1.8
CSMD3-208ENST00000497026 TMEM14EPQ6UXP3 125 aa3.83□□□□□ -1.8
CSMD3-208ENST00000497026 ZNF497Q6ZNH5 498 aa3.83□□□□□ -1.8
CSMD3-208ENST00000497026 ATP5L2Q7Z4Y8 100 aa3.83□□□□□ -1.8
CSMD3-208ENST00000497026 ABHD12Q8N2K0 398 aa3.83□□□□□ -1.8
CSMD3-208ENST00000497026 RFESDQ8TAC1 157 aa3.83□□□□□ -1.8
CSMD3-208ENST00000497026 UBALD1Q8TB05 177 aa3.83□□□□□ -1.8
CSMD3-208ENST00000497026 GATAD1Q8WUU5 269 aa3.83□□□□□ -1.8
CSMD3-208ENST00000497026 LEAP2Q969E1 77 aa3.83□□□□□ -1.8
CSMD3-208ENST00000497026 CITED1Q99966 193 aa3.83□□□□□ -1.8
CSMD3-208ENST00000497026 OR2D2Q9H210 308 aa3.83□□□□□ -1.8
CSMD3-208ENST00000497026 C16orf95Q9H693 158 aa3.83□□□□□ -1.8
CSMD3-208ENST00000497026 CALYQ9NYX4 217 aa3.83□□□□□ -1.8
CSMD3-208ENST00000497026 JPT1Q9UK76 154 aa3.83□□□□□ -1.8
CSMD3-208ENST00000497026 TCF19Q9Y242 345 aa3.83□□□□□ -1.8
CSMD3-208ENST00000497026 SIGLEC9Q9Y336 463 aa3.83□□□□□ -1.8
CSMD3-208ENST00000497026 HILPDAQ9Y5L2 63 aa3.83□□□□□ -1.8
CSMD3-208ENST00000497026 MINOS1-NBL1R4GNA1 71 aa3.83□□□□□ -1.8
CSMD3-208ENST00000497026 V9GYV3 84 aa3.83□□□□□ -1.8
CSMD3-208ENST00000497026 A0A087X0K7 114 aa3.82□□□□□ -1.8
CSMD3-208ENST00000497026 A0A0A0MQY5 61 aa3.82□□□□□ -1.8
CSMD3-208ENST00000497026 TEX50A0A1B0GTY4 177 aa3.82□□□□□ -1.8
CSMD3-208ENST00000497026 A0A1W2PPI3 338 aa3.82□□□□□ -1.8
CSMD3-208ENST00000497026 TMEM30CPA0ZSE6 113 aa3.82□□□□□ -1.8
CSMD3-208ENST00000497026 C2orf70A6NJV1 201 aa3.82□□□□□ -1.8
CSMD3-208ENST00000497026 C12orf77C9JDV5 145 aa3.82□□□□□ -1.8
CSMD3-208ENST00000497026 F8W1H4 67 aa3.82□□□□□ -1.8
CSMD3-208ENST00000497026 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.82□□□□□ -1.8
CSMD3-208ENST00000497026 BUB1B-PAK6H3BSN5 160 aa3.82□□□□□ -1.8
CSMD3-208ENST00000497026 SIVA1O15304 175 aa3.82□□□□□ -1.8
CSMD3-208ENST00000497026 OR2J3O76001 311 aa3.82□□□□□ -1.8
CSMD3-208ENST00000497026 CA1P00915 261 aaPredicted RBP3.82□□□□□ -1.8
CSMD3-208ENST00000497026 PRSS2P07478 247 aa3.82□□□□□ -1.8
CSMD3-208ENST00000497026 MGST1P10620 155 aaKnown RBP3.82□□□□□ -1.8
CSMD3-208ENST00000497026 AREGP15514 252 aa3.82□□□□□ -1.8
CSMD3-208ENST00000497026 NPPCP23582 126 aa3.82□□□□□ -1.8
CSMD3-208ENST00000497026 CD24P25063 80 aa3.82□□□□□ -1.8
CSMD3-208ENST00000497026 RPL36AP83881 106 aaKnown RBP3.82□□□□□ -1.8
CSMD3-208ENST00000497026 RTL8BQ17RB0 113 aa3.82□□□□□ -1.8
CSMD3-208ENST00000497026 VWC2Q2TAL6 325 aa3.82□□□□□ -1.8
CSMD3-208ENST00000497026 CENPWQ5EE01 88 aa3.82□□□□□ -1.8
CSMD3-208ENST00000497026 HIST2H2BDQ6DRA6 164 aa3.82□□□□□ -1.8
CSMD3-208ENST00000497026 EBLN2Q6P2I7 272 aa3.82□□□□□ -1.8
CSMD3-208ENST00000497026 ADAMTSL5Q6ZMM2 481 aa3.82□□□□□ -1.8
CSMD3-208ENST00000497026 ZNF818PQ6ZRF7 136 aa3.82□□□□□ -1.8
CSMD3-208ENST00000497026 TMEM219Q86XT9 240 aa3.82□□□□□ -1.8
CSMD3-208ENST00000497026 Q8N2B8 174 aa3.82□□□□□ -1.8
CSMD3-208ENST00000497026 FAM19A2Q8N3H0 131 aa3.82□□□□□ -1.8
CSMD3-208ENST00000497026 TTC9CQ8N5M4 171 aa3.82□□□□□ -1.8
CSMD3-208ENST00000497026 ZNF114Q8NC26 417 aa3.82□□□□□ -1.8
CSMD3-208ENST00000497026 OR9G1Q8NH87 305 aa3.82□□□□□ -1.8
CSMD3-208ENST00000497026 OCC1Q8TAD7 63 aa3.82□□□□□ -1.8
CSMD3-208ENST00000497026 ZNF502Q8TBZ5 544 aa3.82□□□□□ -1.8
CSMD3-208ENST00000497026 GALMQ96C23 342 aa3.82□□□□□ -1.8
CSMD3-208ENST00000497026 ADTRPQ96IZ2 230 aa3.82□□□□□ -1.8
CSMD3-208ENST00000497026 SPXQ9BT56 116 aa3.82□□□□□ -1.8
CSMD3-208ENST00000497026 GGTLC1Q9BX51 225 aa3.82□□□□□ -1.8
CSMD3-208ENST00000497026 ZNF702PQ9H963 129 aa3.82□□□□□ -1.8
CSMD3-208ENST00000497026 IDI2-AS1Q9NZ38 188 aa3.82□□□□□ -1.8
CSMD3-208ENST00000497026 DPM3Q9P2X0 92 aa3.82□□□□□ -1.8
CSMD3-208ENST00000497026 ERG28Q9UKR5 140 aa3.82□□□□□ -1.8
CSMD3-208ENST00000497026 IGHV3-43A0A0B4J1X8 118 aa3.81□□□□□ -1.8
CSMD3-208ENST00000497026 TRBV7-9A0A0J9YWB2 115 aa3.81□□□□□ -1.8
CSMD3-208ENST00000497026 A0A1B0GW15 77 aa3.81□□□□□ -1.8
CSMD3-208ENST00000497026 SMIM27A0A1W2PRY6 76 aa3.81□□□□□ -1.8
CSMD3-208ENST00000497026 hDV102S1A0JD36 115 aa3.81□□□□□ -1.8
CSMD3-208ENST00000497026 HELTA6NFD8 242 aa3.81□□□□□ -1.8
CSMD3-208ENST00000497026 PGPEP1LA6NFU8 196 aa3.81□□□□□ -1.8
CSMD3-208ENST00000497026 NPIPB5A8MRT5 1133 aa3.81□□□□□ -1.8
CSMD3-208ENST00000497026 PGLYRP1O75594 196 aaPredicted RBP3.81□□□□□ -1.8
CSMD3-208ENST00000497026 ARL14EPLP0DKL9 152 aa3.81□□□□□ -1.8
CSMD3-208ENST00000497026 IGHV3-43DP0DP04 118 aa3.81□□□□□ -1.8
CSMD3-208ENST00000497026 GATA2P23769 480 aaPredicted RBP3.81□□□□□ -1.8
CSMD3-208ENST00000497026 OPRK1P41145 380 aa3.81□□□□□ -1.8
CSMD3-208ENST00000497026 TCTAP57738 103 aa3.81□□□□□ -1.8
CSMD3-208ENST00000497026 TAS2R45P59539 299 aa3.81□□□□□ -1.8
CSMD3-208ENST00000497026 ARL16Q0P5N6 197 aa3.81□□□□□ -1.8
CSMD3-208ENST00000497026 GAGE5Q13069 117 aa3.81□□□□□ -1.8
CSMD3-208ENST00000497026 GAGE6Q13070 117 aa3.81□□□□□ -1.8
CSMD3-208ENST00000497026 TNXAQ16473 311 aa3.81□□□□□ -1.8
CSMD3-208ENST00000497026 KIAA1644Q3SXP7 199 aa3.81□□□□□ -1.8
CSMD3-208ENST00000497026 PDLIM3Q53GG5 364 aaPredicted RBP3.81□□□□□ -1.8
CSMD3-208ENST00000497026 IBA57Q5T440 356 aaKnown RBP3.81□□□□□ -1.8
CSMD3-208ENST00000497026 OR52E5Q8NH55 327 aa3.81□□□□□ -1.8
CSMD3-208ENST00000497026 OR51H1Q8NH63 302 aa3.81□□□□□ -1.8
CSMD3-208ENST00000497026 OR4A5Q8NH83 315 aa3.81□□□□□ -1.8
CSMD3-208ENST00000497026 OR1L1Q8NH94 360 aa3.81□□□□□ -1.8
CSMD3-208ENST00000497026 OR2T6Q8NHC8 308 aa3.81□□□□□ -1.8
CSMD3-208ENST00000497026 ATP6V0E2Q8NHE4 81 aa3.81□□□□□ -1.8
CSMD3-208ENST00000497026 HARBI1Q96MB7 349 aa3.81□□□□□ -1.8
CSMD3-208ENST00000497026 ANAPC13Q9BS18 74 aa3.81□□□□□ -1.8
CSMD3-208ENST00000497026 TMEM167BQ9NRX6 74 aa3.81□□□□□ -1.8
CSMD3-208ENST00000497026 SS18L2Q9UHA2 77 aa3.81□□□□□ -1.8
CSMD3-208ENST00000497026 TRRAPQ9Y4A5 3859 aa3.81□□□□□ -1.8
CSMD3-208ENST00000497026 TET2Q6N021 2002 aaPredicted RBP3.81□□□□□ -1.8
CSMD3-208ENST00000497026 TRBV20OR9-2A0A075B6H5 130 aa3.8□□□□□ -1.8
CSMD3-208ENST00000497026 IGHV1-24A0A0C4DH33 117 aa3.8□□□□□ -1.8
CSMD3-208ENST00000497026 K7EN84 100 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms