RNA–Protein interactions for RNA: ENST00000496826.1

USF3-204, Transcript of upstream transcription factor family member 3, humanhuman

TSL 1 (best)

Gene USF3, Length 8,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-204ENST00000496826 TRBV7-6A0A0J9YX20 115 aa4.67□□□□□ -1.66
USF3-204ENST00000496826 C1orf100Q5SVJ3 147 aa4.67□□□□□ -1.66
USF3-204ENST00000496826 CBLN3Q6UW01 205 aa4.67□□□□□ -1.66
USF3-204ENST00000496826 TPSG1Q9NRR2 321 aa4.67□□□□□ -1.66
USF3-204ENST00000496826 DDX60LQ5H9U9 1706 aaKnown RBP4.67□□□□□ -1.66
USF3-204ENST00000496826 SSC5DA1L4H1 1573 aa4.67□□□□□ -1.66
USF3-204ENST00000496826 WIPF3A6NGB9 483 aa4.67□□□□□ -1.66
USF3-204ENST00000496826 Q96M66 194 aa4.67□□□□□ -1.66
USF3-204ENST00000496826 FOXQ1Q9C009 403 aa4.67□□□□□ -1.66
USF3-204ENST00000496826 DOCK4Q8N1I0 1966 aa4.67□□□□□ -1.66
USF3-204ENST00000496826 RGPD8O14715 1765 aaPredicted RBP4.67□□□□□ -1.66
USF3-204ENST00000496826 RGPD5Q99666 1765 aa4.67□□□□□ -1.66
USF3-204ENST00000496826 H3BUX3 64 aa4.67□□□□□ -1.66
USF3-204ENST00000496826 K7EM74 188 aa4.67□□□□□ -1.66
USF3-204ENST00000496826 SPRY2O43597 315 aa4.67□□□□□ -1.66
USF3-204ENST00000496826 UNQ6494/PRO21346Q6UXR6 183 aa4.67□□□□□ -1.66
USF3-204ENST00000496826 Q9HAA7 133 aa4.67□□□□□ -1.66
USF3-204ENST00000496826 LAMB1P07942 1786 aa4.67□□□□□ -1.66
USF3-204ENST00000496826 IGHV3-73A0A0B4J1V6 119 aa4.67□□□□□ -1.66
USF3-204ENST00000496826 F8W735 103 aaPredicted RBP4.67□□□□□ -1.66
USF3-204ENST00000496826 EFNA2O43921 213 aa4.67□□□□□ -1.66
USF3-204ENST00000496826 SNED1Q8TER0 1413 aa4.67□□□□□ -1.66
USF3-204ENST00000496826 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.67□□□□□ -1.66
USF3-204ENST00000496826 IGHV3OR16-13A0A075B7E8 117 aa4.67□□□□□ -1.66
USF3-204ENST00000496826 IGHV3-74A0A0B4J1X5 117 aa4.67□□□□□ -1.66
USF3-204ENST00000496826 MUC21A0A0G2JKD1 596 aa4.67□□□□□ -1.66
USF3-204ENST00000496826 H0Y8X5 98 aa4.67□□□□□ -1.66
USF3-204ENST00000496826 IGKV1D-16P01601 117 aa4.67□□□□□ -1.66
USF3-204ENST00000496826 IGKV1-16P04430 117 aa4.67□□□□□ -1.66
USF3-204ENST00000496826 RETNLBQ9BQ08 111 aa4.67□□□□□ -1.66
USF3-204ENST00000496826 XCL2Q9UBD3 114 aa4.67□□□□□ -1.66
USF3-204ENST00000496826 TRAV26-1A0A087WT03 109 aa4.66□□□□□ -1.66
USF3-204ENST00000496826 TRBV10-3A0A0K0K1G6 114 aa4.66□□□□□ -1.66
USF3-204ENST00000496826 GYPEP15421 78 aa4.66□□□□□ -1.66
USF3-204ENST00000496826 TMEM196Q5HYL7 178 aa4.66□□□□□ -1.66
USF3-204ENST00000496826 C8orf87E5RJ46 101 aa4.66□□□□□ -1.66
USF3-204ENST00000496826 RFPL3SP0C7P2 107 aa4.66□□□□□ -1.66
USF3-204ENST00000496826 HILS1P60008 231 aa4.66□□□□□ -1.66
USF3-204ENST00000496826 FAM231DQ6ZW35 169 aa4.66□□□□□ -1.66
USF3-204ENST00000496826 CLUHP3Q96NS8 147 aa4.66□□□□□ -1.66
USF3-204ENST00000496826 MRPL35Q9NZE8 188 aaKnown RBP4.66□□□□□ -1.66
USF3-204ENST00000496826 PRR14LQ5THK1 2151 aa4.66□□□□□ -1.66
USF3-204ENST00000496826 GREB1Q4ZG55 1949 aa4.66□□□□□ -1.66
USF3-204ENST00000496826 CRYBG1Q9Y4K1 1723 aa4.66□□□□□ -1.66
USF3-204ENST00000496826 CLEC2BQ92478 149 aa4.66□□□□□ -1.66
USF3-204ENST00000496826 BAZ2AQ9UIF9 1905 aaKnown RBP4.66□□□□□ -1.66
USF3-204ENST00000496826 CACNA1HO95180 2353 aa4.66□□□□□ -1.66
USF3-204ENST00000496826 PARP4Q9UKK3 1724 aaKnown RBP4.66□□□□□ -1.66
USF3-204ENST00000496826 RPL28P46779 137 aaKnown RBP4.66□□□□□ -1.66
USF3-204ENST00000496826 VMO1Q7Z5L0 202 aa4.66□□□□□ -1.66
USF3-204ENST00000496826 GTSF1Q8WW33 167 aa4.66□□□□□ -1.66
USF3-204ENST00000496826 ZNF837Q96EG3 531 aaPredicted RBP4.66□□□□□ -1.66
USF3-204ENST00000496826 CRIPTQ9P021 101 aa4.66□□□□□ -1.66
USF3-204ENST00000496826 PLCH1Q4KWH8 1693 aa4.66□□□□□ -1.66
USF3-204ENST00000496826 DEFB131AP59861 70 aa4.66□□□□□ -1.66
USF3-204ENST00000496826 LINC00483Q53H64 154 aa4.66□□□□□ -1.66
USF3-204ENST00000496826 Q6JHZ5 121 aa4.66□□□□□ -1.66
USF3-204ENST00000496826 Q6ZQY7 126 aa4.66□□□□□ -1.66
USF3-204ENST00000496826 HIGD2AQ9BW72 106 aa4.66□□□□□ -1.66
USF3-204ENST00000496826 FMN2Q9NZ56 1722 aa4.66□□□□□ -1.66
USF3-204ENST00000496826 SCN10AQ9Y5Y9 1956 aa4.66□□□□□ -1.66
USF3-204ENST00000496826 PHIPQ8WWQ0 1821 aa4.65□□□□□ -1.66
USF3-204ENST00000496826 RGPD1P0DJD0 1748 aa4.65□□□□□ -1.66
USF3-204ENST00000496826 TRAV10A0A0B4J240 114 aa4.65□□□□□ -1.66
USF3-204ENST00000496826 C12orf77C9JDV5 145 aa4.65□□□□□ -1.66
USF3-204ENST00000496826 Q9H8V8 135 aa4.65□□□□□ -1.66
USF3-204ENST00000496826 KIF13BQ9NQT8 1826 aa4.65□□□□□ -1.66
USF3-204ENST00000496826 A0A087WZ39 114 aa4.65□□□□□ -1.66
USF3-204ENST00000496826 LINC01565O15544 149 aa4.65□□□□□ -1.66
USF3-204ENST00000496826 CD55P08174 381 aa4.65□□□□□ -1.66
USF3-204ENST00000496826 SLC22A18ASQ8N1D0 253 aa4.65□□□□□ -1.66
USF3-204ENST00000496826 MDFICQ9P1T7 246 aa4.65□□□□□ -1.66
USF3-204ENST00000496826 K7EQD1 137 aa4.65□□□□□ -1.67
USF3-204ENST00000496826 CLTCQ00610 1675 aaKnown RBP4.65□□□□□ -1.67
USF3-204ENST00000496826 NAV3Q8IVL0 2385 aa4.65□□□□□ -1.67
USF3-204ENST00000496826 IGHV5-10-1A0A0J9YXX1 117 aa4.65□□□□□ -1.67
USF3-204ENST00000496826 LGALS9O00182 355 aa4.65□□□□□ -1.67
USF3-204ENST00000496826 EDN2P20800 178 aa4.65□□□□□ -1.67
USF3-204ENST00000496826 Q86TA4 180 aa4.65□□□□□ -1.67
USF3-204ENST00000496826 PTH2Q96A98 100 aa4.65□□□□□ -1.67
USF3-204ENST00000496826 LRP6O75581 1613 aa4.65□□□□□ -1.67
USF3-204ENST00000496826 LST1O00453 97 aa4.65□□□□□ -1.67
USF3-204ENST00000496826 M0QXV9 152 aa4.64□□□□□ -1.67
USF3-204ENST00000496826 CFAP126Q5VTH2 177 aa4.64□□□□□ -1.67
USF3-204ENST00000496826 Q6ZRM9 215 aa4.64□□□□□ -1.67
USF3-204ENST00000496826 MIR17HGQ75NE6 70 aa4.64□□□□□ -1.67
USF3-204ENST00000496826 IGHV3-23P01764 117 aa4.64□□□□□ -1.67
USF3-204ENST00000496826 KIAA0040Q15053 153 aa4.64□□□□□ -1.67
USF3-204ENST00000496826 hDV103S1A0JD37 113 aa4.64□□□□□ -1.67
USF3-204ENST00000496826 RNASE7Q9H1E1 156 aaKnown RBP4.64□□□□□ -1.67
USF3-204ENST00000496826 KLK12Q9UKR0 248 aa4.64□□□□□ -1.67
USF3-204ENST00000496826 IGHV3-35A0A0C4DH35 117 aa4.64□□□□□ -1.67
USF3-204ENST00000496826 F8WDY8 70 aa4.64□□□□□ -1.67
USF3-204ENST00000496826 IGLV3-25P01717 112 aa4.64□□□□□ -1.67
USF3-204ENST00000496826 LRRC75A-AS1Q8N1F1 130 aa4.64□□□□□ -1.67
USF3-204ENST00000496826 NTN5Q8WTR8 489 aaPredicted RBP4.64□□□□□ -1.67
USF3-204ENST00000496826 C10orf25Q5T742 122 aa4.64□□□□□ -1.67
USF3-204ENST00000496826 DEFB132Q7Z7B7 95 aa4.64□□□□□ -1.67
USF3-204ENST00000496826 SMAD5-AS1Q9Y6J3 95 aa4.64□□□□□ -1.67
USF3-204ENST00000496826 TOGARAM1Q9Y4F4 1720 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms