RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-233ENST00000495899 HMGB3O15347 200 aaKnown RBP8.8□□□□□ -1
MRPL55-233ENST00000495899 ZNF324O75467 553 aaPredicted RBP8.8□□□□□ -1
MRPL55-233ENST00000495899 EIF3GO75821 320 aaKnown RBP eCLIP8.8□□□□□ -1
MRPL55-233ENST00000495899 GPX1P07203 203 aa8.8□□□□□ -1
MRPL55-233ENST00000495899 GCHFRP30047 84 aa8.8□□□□□ -1
MRPL55-233ENST00000495899 DAD1P61803 113 aa8.8□□□□□ -1
MRPL55-233ENST00000495899 LGALS9CQ6DKI2 356 aa8.8□□□□□ -1
MRPL55-233ENST00000495899 RNASE8Q8TDE3 154 aaKnown RBP8.8□□□□□ -1
MRPL55-233ENST00000495899 TMED6Q8WW62 240 aa8.8□□□□□ -1
MRPL55-233ENST00000495899 FAM210BQ96KR6 192 aa8.8□□□□□ -1
MRPL55-233ENST00000495899 TMEM167BQ9NRX6 74 aa8.8□□□□□ -1
MRPL55-233ENST00000495899 APLNQ9ULZ1 77 aa8.8□□□□□ -1
MRPL55-233ENST00000495899 TIMM8BQ9Y5J9 83 aaPredicted RBP8.8□□□□□ -1
MRPL55-233ENST00000495899 LENEPQ9Y5L5 61 aa8.8□□□□□ -1
MRPL55-233ENST00000495899 IGHV4-4A0A075B6R2 117 aa8.79□□□□□ -1
MRPL55-233ENST00000495899 LY6G6CO95867 125 aa8.79□□□□□ -1
MRPL55-233ENST00000495899 RNASE4P34096 147 aaKnown RBP8.79□□□□□ -1
MRPL55-233ENST00000495899 LGALSLQ3ZCW2 172 aaPredicted RBP8.79□□□□□ -1
MRPL55-233ENST00000495899 AKR1C8PQ5T2L2 129 aa8.79□□□□□ -1
MRPL55-233ENST00000495899 C9orf62Q8N4C0 152 aa8.79□□□□□ -1
MRPL55-233ENST00000495899 ZFAND2AQ8N6M9 145 aa8.79□□□□□ -1
MRPL55-233ENST00000495899 CTXND1A0A1B0GTU2 59 aa8.78□□□□□ -1
MRPL55-233ENST00000495899 SERTM2A0A1B0GWG4 89 aa8.78□□□□□ -1
MRPL55-233ENST00000495899 NDUFAF3Q9BU61 184 aa8.78□□□□□ -1
MRPL55-233ENST00000495899 DYNC2H1Q8NCM8 4307 aaKnown RBP8.78□□□□□ -1
MRPL55-233ENST00000495899 CBY3A6NI87 242 aa8.77□□□□□ -1.01
MRPL55-233ENST00000495899 BTN1A1Q13410 526 aa8.77□□□□□ -1.01
MRPL55-233ENST00000495899 ANXA2RQ3ZCQ2 193 aa8.77□□□□□ -1.01
MRPL55-233ENST00000495899 C5orf17Q8NAS9 161 aa8.77□□□□□ -1.01
MRPL55-233ENST00000495899 ZNF680Q8NEM1 530 aa8.77□□□□□ -1.01
MRPL55-233ENST00000495899 KANTRA0A1W2PQU2 76 aa8.76□□□□□ -1.01
MRPL55-233ENST00000495899 A0A1W2PRE2 83 aa8.76□□□□□ -1.01
MRPL55-233ENST00000495899 SNURFLB1AK76 121 aa8.76□□□□□ -1.01
MRPL55-233ENST00000495899 K7EQM0 130 aa8.76□□□□□ -1.01
MRPL55-233ENST00000495899 BCL2L11O43521 198 aa8.76□□□□□ -1.01
MRPL55-233ENST00000495899 SEC11BP0C7V7 166 aa8.76□□□□□ -1.01
MRPL55-233ENST00000495899 DEFB130BP0DP73 79 aa8.76□□□□□ -1.01
MRPL55-233ENST00000495899 DEFB130AP0DP74 79 aa8.76□□□□□ -1.01
MRPL55-233ENST00000495899 EIF5AP63241 154 aaKnown RBP8.76□□□□□ -1.01
MRPL55-233ENST00000495899 IFITM2Q01629 132 aa8.76□□□□□ -1.01
MRPL55-233ENST00000495899 DAZ2Q13117 558 aaKnown RBP8.76□□□□□ -1.01
MRPL55-233ENST00000495899 ZNF726P1Q15940 193 aa8.76□□□□□ -1.01
MRPL55-233ENST00000495899 GOLT1AQ6ZVE7 132 aa8.76□□□□□ -1.01
MRPL55-233ENST00000495899 EIF4E3Q8N5X7 224 aaKnown RBP8.76□□□□□ -1.01
MRPL55-233ENST00000495899 Q8TAT8 98 aa8.76□□□□□ -1.01
MRPL55-233ENST00000495899 NOP10Q9NPE3 64 aaKnown RBP8.76□□□□□ -1.01
MRPL55-233ENST00000495899 RYR2Q92736 4967 aa8.75□□□□□ -1.01
MRPL55-233ENST00000495899 LYSTQ99698 3801 aa8.75□□□□□ -1.01
MRPL55-233ENST00000495899 FBLL1A6NHQ2 334 aaKnown RBP8.75□□□□□ -1.01
MRPL55-233ENST00000495899 UMAD1C9J7I0 102 aa8.75□□□□□ -1.01
MRPL55-233ENST00000495899 TCRAP04437 139 aa8.75□□□□□ -1.01
MRPL55-233ENST00000495899 ATP5G1P05496 136 aa8.75□□□□□ -1.01
MRPL55-233ENST00000495899 ATP5G3P48201 142 aa8.75□□□□□ -1.01
MRPL55-233ENST00000495899 PRR9Q5T870 116 aa8.75□□□□□ -1.01
MRPL55-233ENST00000495899 SSX7Q7RTT5 188 aa8.75□□□□□ -1.01
MRPL55-233ENST00000495899 Q8N3U1 123 aa8.75□□□□□ -1.01
MRPL55-233ENST00000495899 LINC00612Q8N6U2 182 aa8.75□□□□□ -1.01
MRPL55-233ENST00000495899 NKX6-2Q9C056 277 aaPredicted RBP8.75□□□□□ -1.01
MRPL55-233ENST00000495899 IGHV1OR15-1A0A075B7D0 117 aa8.74□□□□□ -1.01
MRPL55-233ENST00000495899 HTN3P15516 51 aa8.74□□□□□ -1.01
MRPL55-233ENST00000495899 IBA57Q5T440 356 aaKnown RBP8.74□□□□□ -1.01
MRPL55-233ENST00000495899 Q6AWC8 147 aa8.74□□□□□ -1.01
MRPL55-233ENST00000495899 TMUB2Q71RG4 321 aa8.74□□□□□ -1.01
MRPL55-233ENST00000495899 IQCF2Q8IXL9 164 aa8.74□□□□□ -1.01
MRPL55-233ENST00000495899 C11orf72Q8NBR9 251 aa8.74□□□□□ -1.01
MRPL55-233ENST00000495899 STOML3Q8TAV4 291 aa8.74□□□□□ -1.01
MRPL55-233ENST00000495899 ZNF471Q9BX82 626 aaPredicted RBP8.74□□□□□ -1.01
MRPL55-233ENST00000495899 EPDR1Q9UM22 224 aa8.74□□□□□ -1.01
MRPL55-233ENST00000495899 RPH3ALQ9UNE2 315 aa8.74□□□□□ -1.01
MRPL55-233ENST00000495899 SACSQ9NZJ4 4579 aa8.73□□□□□ -1.01
MRPL55-233ENST00000495899 GGTLC3B5MD39 225 aa8.73□□□□□ -1.01
MRPL55-233ENST00000495899 P0DMU3 169 aa8.73□□□□□ -1.01
MRPL55-233ENST00000495899 FAM231AP0DMU4 169 aa8.73□□□□□ -1.01
MRPL55-233ENST00000495899 FAM231CP0DMU5 169 aa8.73□□□□□ -1.01
MRPL55-233ENST00000495899 GNG5P63218 68 aa8.73□□□□□ -1.01
MRPL55-233ENST00000495899 DPPA3Q6W0C5 159 aa8.73□□□□□ -1.01
MRPL55-233ENST00000495899 NDFIP1Q9BT67 221 aa8.73□□□□□ -1.01
MRPL55-233ENST00000495899 TREM1Q9NP99 234 aa8.73□□□□□ -1.01
MRPL55-233ENST00000495899 GSN-AS1Q9NRJ2 163 aa8.73□□□□□ -1.01
MRPL55-233ENST00000495899 PLECQ15149 4684 aaKnown RBP8.73□□□□□ -1.01
MRPL55-233ENST00000495899 TRAV8-1A0A0A6YYK1 113 aa8.72□□□□□ -1.01
MRPL55-233ENST00000495899 MAP1LC3B2A6NCE7 125 aa8.72□□□□□ -1.01
MRPL55-233ENST00000495899 TPT1P13693 172 aaKnown RBP8.72□□□□□ -1.01
MRPL55-233ENST00000495899 TCL1AP56279 114 aa8.72□□□□□ -1.01
MRPL55-233ENST00000495899 TDRG1Q3Y452 100 aa8.72□□□□□ -1.01
MRPL55-233ENST00000495899 CYB561D1Q8N8Q1 229 aa8.72□□□□□ -1.01
MRPL55-233ENST00000495899 C15orf53Q8NAA6 179 aa8.72□□□□□ -1.01
MRPL55-233ENST00000495899 MBD3L1Q8WWY6 194 aa8.72□□□□□ -1.01
MRPL55-233ENST00000495899 C18orf15Q96N68 181 aa8.72□□□□□ -1.01
MRPL55-233ENST00000495899 ATG101Q9BSB4 218 aa8.72□□□□□ -1.01
MRPL55-233ENST00000495899 MAP1LC3BQ9GZQ8 125 aa8.72□□□□□ -1.01
MRPL55-233ENST00000495899 TRAV21A0A0B4J279 112 aa8.71□□□□□ -1.02
MRPL55-233ENST00000495899 GAGE12BA1L429 117 aa8.71□□□□□ -1.02
MRPL55-233ENST00000495899 F5H768 121 aa8.71□□□□□ -1.02
MRPL55-233ENST00000495899 GAGE7O76087 117 aa8.71□□□□□ -1.02
MRPL55-233ENST00000495899 IFNA7P01567 189 aa8.71□□□□□ -1.02
MRPL55-233ENST00000495899 IGLV2-11P01706 119 aa8.71□□□□□ -1.02
MRPL55-233ENST00000495899 GAGE12FP0CL80 117 aa8.71□□□□□ -1.02
MRPL55-233ENST00000495899 GAGE12GP0CL81 117 aa8.71□□□□□ -1.02
MRPL55-233ENST00000495899 GAGE12IP0CL82 117 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms