RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 AP3S2P59780 193 aa8.87□□□□□ -0.99
COL1A1-209ENST00000495677 CNPY1Q3B7I2 92 aa8.87□□□□□ -0.99
COL1A1-209ENST00000495677 TMEM78Q5T7P6 136 aa8.87□□□□□ -0.99
COL1A1-209ENST00000495677 PRR9Q5T870 116 aa8.87□□□□□ -0.99
COL1A1-209ENST00000495677 CHAC1Q9BUX1 264 aa8.87□□□□□ -0.99
COL1A1-209ENST00000495677 TRAV8-6A0A0B4J262 113 aa8.86□□□□□ -0.99
COL1A1-209ENST00000495677 CAMLGP49069 296 aa8.86□□□□□ -0.99
COL1A1-209ENST00000495677 RAB31Q13636 194 aa8.86□□□□□ -0.99
COL1A1-209ENST00000495677 WFDC2Q14508 124 aa8.86□□□□□ -0.99
COL1A1-209ENST00000495677 ZNF846Q147U1 533 aa8.86□□□□□ -0.99
COL1A1-209ENST00000495677 Q9HAA7 133 aa8.86□□□□□ -0.99
COL1A1-209ENST00000495677 C9orf170A2RU37 121 aa8.85□□□□□ -0.99
COL1A1-209ENST00000495677 PFN1P07737 140 aaKnown RBP8.85□□□□□ -0.99
COL1A1-209ENST00000495677 RPL29P47914 159 aaKnown RBP8.85□□□□□ -0.99
COL1A1-209ENST00000495677 ACOT6Q3I5F7 207 aaPredicted RBP8.85□□□□□ -0.99
COL1A1-209ENST00000495677 NRARPQ7Z6K4 114 aa8.85□□□□□ -0.99
COL1A1-209ENST00000495677 CHAC2Q8WUX2 184 aa8.85□□□□□ -0.99
COL1A1-209ENST00000495677 AAMDCQ9H7C9 122 aa8.85□□□□□ -0.99
COL1A1-209ENST00000495677 LOC100131303A0A0U1RQF7 123 aa8.84□□□□□ -0.99
COL1A1-209ENST00000495677 C7orf66A4D0T2 115 aa8.84□□□□□ -0.99
COL1A1-209ENST00000495677 IGLV2-8P01709 118 aa8.84□□□□□ -0.99
COL1A1-209ENST00000495677 GATA1P15976 413 aaPredicted RBP8.84□□□□□ -0.99
COL1A1-209ENST00000495677 PPT1P50897 306 aa8.84□□□□□ -0.99
COL1A1-209ENST00000495677 ZNF266Q14584 549 aa8.84□□□□□ -0.99
COL1A1-209ENST00000495677 BAK1Q16611 211 aa8.84□□□□□ -0.99
COL1A1-209ENST00000495677 MIC13Q5XKP0 118 aa8.84□□□□□ -0.99
COL1A1-209ENST00000495677 EXOC3-AS1Q8N2X6 119 aa8.84□□□□□ -0.99
COL1A1-209ENST00000495677 TIMM9Q9Y5J7 89 aa8.84□□□□□ -0.99
COL1A1-209ENST00000495677 PKHD1L1Q86WI1 4243 aa8.83□□□□□ -1
COL1A1-209ENST00000495677 TRAV8-3A0A0A6YYJ7 113 aa8.83□□□□□ -1
COL1A1-209ENST00000495677 A6NHS1 94 aa8.83□□□□□ -1
COL1A1-209ENST00000495677 ZNF138P52744 262 aa8.83□□□□□ -1
COL1A1-209ENST00000495677 LELP1Q5T871 98 aa8.83□□□□□ -1
COL1A1-209ENST00000495677 Q6AWC8 147 aa8.83□□□□□ -1
COL1A1-209ENST00000495677 NHLRC2Q8NBF2 726 aa8.83□□□□□ -1
COL1A1-209ENST00000495677 OR4C5Q8NGB2 326 aa8.83□□□□□ -1
COL1A1-209ENST00000495677 CIRBP-AS1Q8TBR5 109 aa8.83□□□□□ -1
COL1A1-209ENST00000495677 TRGV11A0A075B6L2 103 aa8.82□□□□□ -1
COL1A1-209ENST00000495677 IGKV2-40A0A087WW87 121 aaPredicted RBP8.82□□□□□ -1
COL1A1-209ENST00000495677 M0R2P5 195 aa8.82□□□□□ -1
COL1A1-209ENST00000495677 RS1O15537 224 aa8.82□□□□□ -1
COL1A1-209ENST00000495677 CIDEAO60543 219 aa8.82□□□□□ -1
COL1A1-209ENST00000495677 IGKV2D-40P01614 121 aaPredicted RBP8.82□□□□□ -1
COL1A1-209ENST00000495677 IL7P13232 177 aa8.82□□□□□ -1
COL1A1-209ENST00000495677 OR10J3Q5JRS4 329 aa8.82□□□□□ -1
COL1A1-209ENST00000495677 C20orf85Q9H1P6 137 aa8.82□□□□□ -1
COL1A1-209ENST00000495677 SLC39A9Q9NUM3 307 aa8.82□□□□□ -1
COL1A1-209ENST00000495677 WDR83OSQ9Y284 106 aa8.82□□□□□ -1
COL1A1-209ENST00000495677 LENEPQ9Y5L5 61 aa8.82□□□□□ -1
COL1A1-209ENST00000495677 COX11Q9Y6N1 276 aa8.82□□□□□ -1
COL1A1-209ENST00000495677 RBAKDNA6NC62 111 aa8.81□□□□□ -1
COL1A1-209ENST00000495677 IGHV3-30P01768 117 aa8.81□□□□□ -1
COL1A1-209ENST00000495677 IGHV3-33P01772 117 aa8.81□□□□□ -1
COL1A1-209ENST00000495677 IGHV3-30-3P0DP02 117 aa8.81□□□□□ -1
COL1A1-209ENST00000495677 IGHV3-30-5P0DP03 117 aa8.81□□□□□ -1
COL1A1-209ENST00000495677 IAH1Q2TAA2 248 aaPredicted RBP8.81□□□□□ -1
COL1A1-209ENST00000495677 VWC2Q2TAL6 325 aa8.81□□□□□ -1
COL1A1-209ENST00000495677 MUC21Q5SSG8 566 aa8.81□□□□□ -1
COL1A1-209ENST00000495677 FAM159AQ6UWV7 190 aa8.81□□□□□ -1
COL1A1-209ENST00000495677 SDHCQ99643 169 aaPredicted RBP8.81□□□□□ -1
COL1A1-209ENST00000495677 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.8□□□□□ -1
COL1A1-209ENST00000495677 RNF222A6NCQ9 220 aa8.8□□□□□ -1
COL1A1-209ENST00000495677 CENPXA8MT69 81 aa8.8□□□□□ -1
COL1A1-209ENST00000495677 PYYP10082 97 aa8.8□□□□□ -1
COL1A1-209ENST00000495677 TMEM183BQ1AE95 376 aa8.8□□□□□ -1
COL1A1-209ENST00000495677 TMEM183AQ8IXX5 376 aa8.8□□□□□ -1
COL1A1-209ENST00000495677 Q8N976 141 aa8.8□□□□□ -1
COL1A1-209ENST00000495677 TRBV6-4A0A1B0GX49 114 aa8.79□□□□□ -1
COL1A1-209ENST00000495677 SCGB1D2O95969 90 aa8.79□□□□□ -1
COL1A1-209ENST00000495677 IGLV2-11P01706 119 aa8.79□□□□□ -1
COL1A1-209ENST00000495677 MBPP02686 304 aaPredicted RBP8.79□□□□□ -1
COL1A1-209ENST00000495677 NBEAP1P0C6P0 100 aa8.79□□□□□ -1
COL1A1-209ENST00000495677 MT1HL1P0DM35 61 aa8.79□□□□□ -1
COL1A1-209ENST00000495677 LINC01620Q4KN68 170 aa8.79□□□□□ -1
COL1A1-209ENST00000495677 TOR2AQ5JU69 321 aa8.79□□□□□ -1
COL1A1-209ENST00000495677 FAM122CQ6P4D5 195 aa8.79□□□□□ -1
COL1A1-209ENST00000495677 SLC25A29Q8N8R3 303 aa8.79□□□□□ -1
COL1A1-209ENST00000495677 PRADC1Q9BSG0 188 aa8.79□□□□□ -1
COL1A1-209ENST00000495677 GTSF1LQ9H1H1 148 aa8.79□□□□□ -1
COL1A1-209ENST00000495677 SH3BGRL3Q9H299 93 aa8.79□□□□□ -1
COL1A1-209ENST00000495677 BATF3Q9NR55 127 aa8.79□□□□□ -1
COL1A1-209ENST00000495677 UQCC1Q9NVA1 299 aa8.79□□□□□ -1
COL1A1-209ENST00000495677 NAP1L6A6NFF2 107 aa8.78□□□□□ -1
COL1A1-209ENST00000495677 RBFOX3A6NFN3 312 aa8.78□□□□□ -1
COL1A1-209ENST00000495677 S100ZQ8WXG8 99 aa8.78□□□□□ -1
COL1A1-209ENST00000495677 FAM167A-AS1Q96KT0 104 aa8.78□□□□□ -1
COL1A1-209ENST00000495677 GPN1Q9HCN4 374 aaPredicted RBP8.78□□□□□ -1
COL1A1-209ENST00000495677 FLVCR2Q9UPI3 526 aa8.78□□□□□ -1
COL1A1-209ENST00000495677 IGHV3-16A0A0C4DH30 117 aa8.77□□□□□ -1.01
COL1A1-209ENST00000495677 FBLL1A6NHQ2 334 aaKnown RBP8.77□□□□□ -1.01
COL1A1-209ENST00000495677 LECT2O14960 151 aa8.77□□□□□ -1.01
COL1A1-209ENST00000495677 NDUFB6O95139 128 aa8.77□□□□□ -1.01
COL1A1-209ENST00000495677 BTCP35070 178 aa8.77□□□□□ -1.01
COL1A1-209ENST00000495677 RHOHQ15669 191 aa8.77□□□□□ -1.01
COL1A1-209ENST00000495677 ATP6V0E2Q8NHE4 81 aa8.77□□□□□ -1.01
COL1A1-209ENST00000495677 Q8TAT8 98 aa8.77□□□□□ -1.01
COL1A1-209ENST00000495677 TMED6Q8WW62 240 aa8.77□□□□□ -1.01
COL1A1-209ENST00000495677 BAALCQ8WXS3 180 aa8.77□□□□□ -1.01
COL1A1-209ENST00000495677 DAZAP1Q96EP5 407 aaKnown RBP8.77□□□□□ -1.01
COL1A1-209ENST00000495677 SLC25A2Q9BXI2 301 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms