RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 PYGO2Q9BRQ0 406 aa12.36□□□□□ -0.43
HDAC6-235ENST00000495515 VAX2Q9UIW0 290 aa12.36□□□□□ -0.43
HDAC6-235ENST00000495515 TRAV34A0A0B4J273 112 aa12.35□□□□□ -0.43
HDAC6-235ENST00000495515 PDE6DO43924 150 aa12.35□□□□□ -0.43
HDAC6-235ENST00000495515 IGLV2-11P01706 119 aa12.35□□□□□ -0.43
HDAC6-235ENST00000495515 RBMY1A1P0DJD3 496 aaKnown RBP12.35□□□□□ -0.43
HDAC6-235ENST00000495515 RBMY1CP0DJD4 496 aa12.35□□□□□ -0.43
HDAC6-235ENST00000495515 RBMY1FQ15415 496 aaKnown RBP12.35□□□□□ -0.43
HDAC6-235ENST00000495515 IL17DQ8TAD2 202 aa12.35□□□□□ -0.43
HDAC6-235ENST00000495515 LINC00479Q96M42 142 aa12.35□□□□□ -0.43
HDAC6-235ENST00000495515 KLF12Q9Y4X4 402 aa12.35□□□□□ -0.43
HDAC6-235ENST00000495515 TENM3Q9P273 2699 aa12.34□□□□□ -0.43
HDAC6-235ENST00000495515 LOC102723971A0A1B0GUV8 181 aa12.34□□□□□ -0.43
HDAC6-235ENST00000495515 ZNF705GA8MUZ8 300 aaPredicted RBP12.34□□□□□ -0.43
HDAC6-235ENST00000495515 HTN1P15515 57 aa12.34□□□□□ -0.43
HDAC6-235ENST00000495515 TMEM183BQ1AE95 376 aa12.34□□□□□ -0.43
HDAC6-235ENST00000495515 ZNF493Q6ZR52 646 aa12.34□□□□□ -0.43
HDAC6-235ENST00000495515 ZFP30Q9Y2G7 519 aa12.34□□□□□ -0.43
HDAC6-235ENST00000495515 STAB2Q8WWQ8 2551 aa12.34□□□□□ -0.43
HDAC6-235ENST00000495515 COL7A1Q02388 2944 aa12.33□□□□□ -0.44
HDAC6-235ENST00000495515 TRAV21A0A0B4J279 112 aa12.33□□□□□ -0.44
HDAC6-235ENST00000495515 TRBV6-1A0A0K0K1D8 114 aa12.33□□□□□ -0.44
HDAC6-235ENST00000495515 SCO2A0A1W2PP80 73 aa12.33□□□□□ -0.44
HDAC6-235ENST00000495515 RGS13O14921 159 aa12.33□□□□□ -0.44
HDAC6-235ENST00000495515 DEFB4AO15263 64 aa12.33□□□□□ -0.44
HDAC6-235ENST00000495515 ZNF324O75467 553 aaPredicted RBP12.33□□□□□ -0.44
HDAC6-235ENST00000495515 SMUG1Q53HV7 270 aa12.33□□□□□ -0.44
HDAC6-235ENST00000495515 PRR9Q5T870 116 aa12.33□□□□□ -0.44
HDAC6-235ENST00000495515 Q6AWC8 147 aa12.33□□□□□ -0.44
HDAC6-235ENST00000495515 Q86TA4 180 aa12.33□□□□□ -0.44
HDAC6-235ENST00000495515 TVP23CQ96ET8 276 aa12.33□□□□□ -0.44
HDAC6-235ENST00000495515 TEX48A0A1B0GUV7 120 aa12.32□□□□□ -0.44
HDAC6-235ENST00000495515 C2CD4CQ8TF44 421 aa12.32□□□□□ -0.44
HDAC6-235ENST00000495515 C11orf52Q96A22 123 aa12.32□□□□□ -0.44
HDAC6-235ENST00000495515 C16orf74Q96GX8 76 aa12.32□□□□□ -0.44
HDAC6-235ENST00000495515 LINC00467Q9BRT7 94 aa12.32□□□□□ -0.44
HDAC6-235ENST00000495515 IGHV1OR15-1A0A075B7D0 117 aa12.31□□□□□ -0.44
HDAC6-235ENST00000495515 RBFOX3A6NFN3 312 aa12.31□□□□□ -0.44
HDAC6-235ENST00000495515 EMP1P54849 157 aa12.31□□□□□ -0.44
HDAC6-235ENST00000495515 EIF4E3Q8N5X7 224 aaKnown RBP12.31□□□□□ -0.44
HDAC6-235ENST00000495515 C11orf45Q8TAV5 145 aa12.31□□□□□ -0.44
HDAC6-235ENST00000495515 TMEM263Q8WUH6 116 aaKnown RBP12.31□□□□□ -0.44
HDAC6-235ENST00000495515 CXorf65A6NEN9 183 aa12.3□□□□□ -0.44
HDAC6-235ENST00000495515 CBY3A6NI87 242 aa12.3□□□□□ -0.44
HDAC6-235ENST00000495515 GCGP01275 180 aa12.3□□□□□ -0.44
HDAC6-235ENST00000495515 SPART-AS1P0CW21 52 aa12.3□□□□□ -0.44
HDAC6-235ENST00000495515 RAB14P61106 215 aa12.3□□□□□ -0.44
HDAC6-235ENST00000495515 FAM159AQ6UWV7 190 aa12.3□□□□□ -0.44
HDAC6-235ENST00000495515 C8orf49Q96NF6 230 aa12.3□□□□□ -0.44
HDAC6-235ENST00000495515 MED9Q9NWA0 146 aa12.3□□□□□ -0.44
HDAC6-235ENST00000495515 HUWE1Q7Z6Z7 4374 aaKnown RBP12.29□□□□□ -0.44
HDAC6-235ENST00000495515 LTAP01374 205 aa12.29□□□□□ -0.44
HDAC6-235ENST00000495515 PFN1P07737 140 aaKnown RBP12.29□□□□□ -0.44
HDAC6-235ENST00000495515 AZU1P20160 251 aa12.29□□□□□ -0.44
HDAC6-235ENST00000495515 ANXA2RQ3ZCQ2 193 aa12.29□□□□□ -0.44
HDAC6-235ENST00000495515 ZNF506Q5JVG8 444 aa12.29□□□□□ -0.44
HDAC6-235ENST00000495515 EIF5A2Q9GZV4 153 aaKnown RBP12.29□□□□□ -0.44
HDAC6-235ENST00000495515 SNURFLB1AK76 121 aa12.28□□□□□ -0.44
HDAC6-235ENST00000495515 PRM2P04554 102 aa12.28□□□□□ -0.44
HDAC6-235ENST00000495515 RPL35P42766 123 aaKnown RBP12.28□□□□□ -0.44
HDAC6-235ENST00000495515 ZNF767PQ75MW2 155 aa12.28□□□□□ -0.44
HDAC6-235ENST00000495515 COX8CQ7Z4L0 72 aa12.28□□□□□ -0.44
HDAC6-235ENST00000495515 BAGE2Q86Y30 109 aa12.28□□□□□ -0.44
HDAC6-235ENST00000495515 TMEM183AQ8IXX5 376 aa12.28□□□□□ -0.44
HDAC6-235ENST00000495515 MUC7Q8TAX7 377 aa12.28□□□□□ -0.44
HDAC6-235ENST00000495515 RNASE8Q8TDE3 154 aaKnown RBP12.28□□□□□ -0.44
HDAC6-235ENST00000495515 KCNS1Q96KK3 526 aa12.28□□□□□ -0.44
HDAC6-235ENST00000495515 FAM210AQ96ND0 272 aa12.28□□□□□ -0.44
HDAC6-235ENST00000495515 NAGKQ9UJ70 344 aa12.28□□□□□ -0.44
HDAC6-235ENST00000495515 TIMM8BQ9Y5J9 83 aaPredicted RBP12.28□□□□□ -0.44
HDAC6-235ENST00000495515 LYRM9A8MSI8 78 aa12.27□□□□□ -0.45
HDAC6-235ENST00000495515 FABP5P3A8MUU1 101 aa12.27□□□□□ -0.45
HDAC6-235ENST00000495515 TOR2AQ5JU69 321 aa12.27□□□□□ -0.45
HDAC6-235ENST00000495515 MUC21Q5SSG8 566 aa12.27□□□□□ -0.45
HDAC6-235ENST00000495515 TRGV11A0A075B6L2 103 aa12.26□□□□□ -0.45
HDAC6-235ENST00000495515 TMEM250H0YL14 139 aa12.26□□□□□ -0.45
HDAC6-235ENST00000495515 NDUFS6O75380 124 aaKnown RBP12.26□□□□□ -0.45
HDAC6-235ENST00000495515 ZNF80P51504 273 aaPredicted RBP12.26□□□□□ -0.45
HDAC6-235ENST00000495515 TDRG1Q3Y452 100 aa12.26□□□□□ -0.45
HDAC6-235ENST00000495515 IBA57Q5T440 356 aaKnown RBP12.26□□□□□ -0.45
HDAC6-235ENST00000495515 FAM222AQ5U5X8 452 aa12.26□□□□□ -0.45
HDAC6-235ENST00000495515 Q6ZQT7 251 aa12.26□□□□□ -0.45
HDAC6-235ENST00000495515 PCNPQ8WW12 178 aaKnown RBP12.26□□□□□ -0.45
HDAC6-235ENST00000495515 SDF2L1Q9HCN8 221 aa12.26□□□□□ -0.45
HDAC6-235ENST00000495515 DKK2Q9UBU2 259 aa12.26□□□□□ -0.45
HDAC6-235ENST00000495515 C3orf84H3BNL1 204 aa12.25□□□□□ -0.45
HDAC6-235ENST00000495515 FAM162BQ5T6X4 162 aa12.25□□□□□ -0.45
HDAC6-235ENST00000495515 ZC2HC1AQ96GY0 325 aa12.25□□□□□ -0.45
HDAC6-235ENST00000495515 PLAC8L1A1L4L8 177 aa12.24□□□□□ -0.45
HDAC6-235ENST00000495515 GNG4P50150 75 aa12.24□□□□□ -0.45
HDAC6-235ENST00000495515 NANOS2P60321 138 aaKnown RBP12.24□□□□□ -0.45
HDAC6-235ENST00000495515 ZNF415Q09FC8 603 aa12.24□□□□□ -0.45
HDAC6-235ENST00000495515 CENPWQ5EE01 88 aa12.24□□□□□ -0.45
HDAC6-235ENST00000495515 SMIM12Q96EX1 92 aa12.24□□□□□ -0.45
HDAC6-235ENST00000495515 DERL1Q9BUN8 251 aa12.24□□□□□ -0.45
HDAC6-235ENST00000495515 CELA1Q9UNI1 258 aa12.24□□□□□ -0.45
HDAC6-235ENST00000495515 DAD1P61803 113 aa12.23□□□□□ -0.45
HDAC6-235ENST00000495515 DAZ2Q13117 558 aaKnown RBP12.23□□□□□ -0.45
HDAC6-235ENST00000495515 NHLRC2Q8NBF2 726 aa12.23□□□□□ -0.45
HDAC6-235ENST00000495515 MLST8Q9BVC4 326 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms