RNA–Protein interactions for RNA: ENST00000495509.6

PHF1-211, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-211ENST00000495509 HLA-DRB4X5D2U9 266 aa11.59□□□□□ -0.55
PHF1-211ENST00000495509 RBMY1BA6NDE4 496 aaKnown RBP11.58□□□□□ -0.56
PHF1-211ENST00000495509 RBMY1EA6NEQ0 496 aaKnown RBP11.58□□□□□ -0.56
PHF1-211ENST00000495509 RBMY1DP0C7P1 496 aaKnown RBP11.58□□□□□ -0.56
PHF1-211ENST00000495509 CRIP1P50238 77 aa11.58□□□□□ -0.56
PHF1-211ENST00000495509 CMC4P56277 68 aaPredicted RBP11.58□□□□□ -0.56
PHF1-211ENST00000495509 LINC00322Q6ZN03 302 aaPredicted RBP11.58□□□□□ -0.56
PHF1-211ENST00000495509 Q8N1Y9 231 aa11.58□□□□□ -0.56
PHF1-211ENST00000495509 FAM19A4Q96LR4 140 aa11.58□□□□□ -0.56
PHF1-211ENST00000495509 FAM110AQ9BQ89 295 aa11.58□□□□□ -0.56
PHF1-211ENST00000495509 PPP1R14DQ9NXH3 145 aa11.58□□□□□ -0.56
PHF1-211ENST00000495509 NBEAL1Q6ZS30 2694 aa11.58□□□□□ -0.56
PHF1-211ENST00000495509 TGIF2-C20orf24A0A0A6YYL0 155 aa11.57□□□□□ -0.56
PHF1-211ENST00000495509 FBLL1A6NHQ2 334 aaKnown RBP11.57□□□□□ -0.56
PHF1-211ENST00000495509 CXCL1P09341 107 aa11.57□□□□□ -0.56
PHF1-211ENST00000495509 SAPCD1Q5SSQ6 148 aa11.57□□□□□ -0.56
PHF1-211ENST00000495509 PRR9Q5T870 116 aa11.57□□□□□ -0.56
PHF1-211ENST00000495509 PRR27Q6MZM9 219 aa11.57□□□□□ -0.56
PHF1-211ENST00000495509 AMTNQ6UX39 209 aa11.57□□□□□ -0.56
PHF1-211ENST00000495509 Q6ZQT7 251 aa11.57□□□□□ -0.56
PHF1-211ENST00000495509 GTSCR1Q86UQ5 136 aa11.57□□□□□ -0.56
PHF1-211ENST00000495509 BIN3Q9NQY0 253 aa11.57□□□□□ -0.56
PHF1-211ENST00000495509 LY96Q9Y6Y9 160 aa11.57□□□□□ -0.56
PHF1-211ENST00000495509 DUSP14O95147 198 aaKnown RBP11.56□□□□□ -0.56
PHF1-211ENST00000495509 GCGP01275 180 aa11.56□□□□□ -0.56
PHF1-211ENST00000495509 RPS10P46783 165 aaKnown RBP11.56□□□□□ -0.56
PHF1-211ENST00000495509 ZNF80P51504 273 aaPredicted RBP11.56□□□□□ -0.56
PHF1-211ENST00000495509 FXYD7P58549 80 aa11.56□□□□□ -0.56
PHF1-211ENST00000495509 KRTAP21-3Q3LHN1 58 aa11.56□□□□□ -0.56
PHF1-211ENST00000495509 ZFAND2AQ8N6M9 145 aa11.56□□□□□ -0.56
PHF1-211ENST00000495509 ANAPC16Q96DE5 110 aa11.56□□□□□ -0.56
PHF1-211ENST00000495509 H7BYZ3 331 aa11.56□□□□□ -0.56
PHF1-211ENST00000495509 M0R2Z0 102 aa11.56□□□□□ -0.56
PHF1-211ENST00000495509 EGFEM1PQ0D2K5 195 aa11.56□□□□□ -0.56
PHF1-211ENST00000495509 NDFIP1Q9BT67 221 aa11.56□□□□□ -0.56
PHF1-211ENST00000495509 A8MTW9 85 aa11.55□□□□□ -0.56
PHF1-211ENST00000495509 SMUG1Q53HV7 270 aa11.55□□□□□ -0.56
PHF1-211ENST00000495509 SAMD5Q5TGI4 173 aa11.55□□□□□ -0.56
PHF1-211ENST00000495509 STHQ8IWL8 128 aa11.55□□□□□ -0.56
PHF1-211ENST00000495509 RNASE7Q9H1E1 156 aaKnown RBP11.55□□□□□ -0.56
PHF1-211ENST00000495509 LENEPQ9Y5L5 61 aa11.55□□□□□ -0.56
PHF1-211ENST00000495509 SPINK13Q1W4C9 94 aa11.54□□□□□ -0.56
PHF1-211ENST00000495509 COX8CQ7Z4L0 72 aa11.54□□□□□ -0.56
PHF1-211ENST00000495509 TRPT1Q86TN4 253 aaKnown RBP11.54□□□□□ -0.56
PHF1-211ENST00000495509 SMIM12Q96EX1 92 aa11.54□□□□□ -0.56
PHF1-211ENST00000495509 TRAV12-2A0A075B6T6 113 aa11.54□□□□□ -0.56
PHF1-211ENST00000495509 GPX1P07203 203 aa11.54□□□□□ -0.56
PHF1-211ENST00000495509 CRISP2P16562 243 aa11.54□□□□□ -0.56
PHF1-211ENST00000495509 S100PP25815 95 aa11.54□□□□□ -0.56
PHF1-211ENST00000495509 RNASE4P34096 147 aaKnown RBP11.54□□□□□ -0.56
PHF1-211ENST00000495509 FAM210BQ96KR6 192 aa11.54□□□□□ -0.56
PHF1-211ENST00000495509 S100A6P06703 90 aa11.53□□□□□ -0.56
PHF1-211ENST00000495509 RPL35AP18077 110 aaKnown RBP11.53□□□□□ -0.56
PHF1-211ENST00000495509 NUDT10Q8NFP7 164 aa11.53□□□□□ -0.56
PHF1-211ENST00000495509 NUDT11Q96G61 164 aa11.53□□□□□ -0.56
PHF1-211ENST00000495509 KLLNB2CW77 178 aa11.52□□□□□ -0.57
PHF1-211ENST00000495509 ERVFC1-1P60608 527 aa11.52□□□□□ -0.57
PHF1-211ENST00000495509 SFRP2Q96HF1 295 aa11.52□□□□□ -0.57
PHF1-211ENST00000495509 ODF3Q96PU9 254 aa11.52□□□□□ -0.57
PHF1-211ENST00000495509 TRBV24-1A0A075B6N3 115 aa11.51□□□□□ -0.57
PHF1-211ENST00000495509 C19orf71A6NCJ1 209 aa11.51□□□□□ -0.57
PHF1-211ENST00000495509 PPP1R2P9O14990 202 aa11.51□□□□□ -0.57
PHF1-211ENST00000495509 SH2D1AO60880 128 aa11.51□□□□□ -0.57
PHF1-211ENST00000495509 PFN1P07737 140 aaKnown RBP11.51□□□□□ -0.57
PHF1-211ENST00000495509 LEPP41159 167 aa11.51□□□□□ -0.57
PHF1-211ENST00000495509 SRD5A3Q9H8P0 318 aa11.51□□□□□ -0.57
PHF1-211ENST00000495509 DNAH3Q8TD57 4116 aa11.51□□□□□ -0.57
PHF1-211ENST00000495509 TRBV7-9A0A0J9YWB2 115 aa11.51□□□□□ -0.57
PHF1-211ENST00000495509 CRXO43186 299 aaPredicted RBP11.51□□□□□ -0.57
PHF1-211ENST00000495509 CDKN1BP46527 198 aa11.51□□□□□ -0.57
PHF1-211ENST00000495509 FAM162BQ5T6X4 162 aa11.51□□□□□ -0.57
PHF1-211ENST00000495509 GFI1BQ5VTD9 330 aa11.51□□□□□ -0.57
PHF1-211ENST00000495509 CLUHP3Q96NS8 147 aa11.51□□□□□ -0.57
PHF1-211ENST00000495509 C11orf21Q9P2W6 132 aa11.51□□□□□ -0.57
PHF1-211ENST00000495509 SNRPEP62304 92 aaKnown RBP11.5□□□□□ -0.57
PHF1-211ENST00000495509 IBA57Q5T440 356 aaKnown RBP11.5□□□□□ -0.57
PHF1-211ENST00000495509 TRAV12-3A0A0B4J271 114 aa11.49□□□□□ -0.57
PHF1-211ENST00000495509 FABP5P3A8MUU1 101 aa11.49□□□□□ -0.57
PHF1-211ENST00000495509 GIG44P09565 113 aaPredicted RBP11.49□□□□□ -0.57
PHF1-211ENST00000495509 TSPOP30536 169 aa11.49□□□□□ -0.57
PHF1-211ENST00000495509 RPL19P84098 196 aaKnown RBP11.49□□□□□ -0.57
PHF1-211ENST00000495509 OR10G8Q8NGN5 311 aa11.49□□□□□ -0.57
PHF1-211ENST00000495509 DAZAP1Q96EP5 407 aaKnown RBP11.49□□□□□ -0.57
PHF1-211ENST00000495509 OSTCQ9NRP0 149 aa11.49□□□□□ -0.57
PHF1-211ENST00000495509 XCL2Q9UBD3 114 aa11.49□□□□□ -0.57
PHF1-211ENST00000495509 DNHD1Q96M86 4753 aa11.49□□□□□ -0.57
PHF1-211ENST00000495509 C5orf52A6NGY3 159 aa11.49□□□□□ -0.57
PHF1-211ENST00000495509 CA1P00915 261 aaPredicted RBP11.49□□□□□ -0.57
PHF1-211ENST00000495509 PRB2P02812 416 aaPredicted RBP11.49□□□□□ -0.57
PHF1-211ENST00000495509 RBMY1A1P0DJD3 496 aaKnown RBP11.49□□□□□ -0.57
PHF1-211ENST00000495509 RBMY1CP0DJD4 496 aa11.49□□□□□ -0.57
PHF1-211ENST00000495509 RBMY1FQ15415 496 aaKnown RBP11.49□□□□□ -0.57
PHF1-211ENST00000495509 KCNIP4Q6PIL6 250 aa11.49□□□□□ -0.57
PHF1-211ENST00000495509 FAM231DQ6ZW35 169 aa11.49□□□□□ -0.57
PHF1-211ENST00000495509 ZNF575Q86XF7 245 aa11.49□□□□□ -0.57
PHF1-211ENST00000495509 PYGO2Q9BRQ0 406 aa11.49□□□□□ -0.57
PHF1-211ENST00000495509 V9GYV3 84 aa11.49□□□□□ -0.57
PHF1-211ENST00000495509 C7orf71A4D174 169 aa11.48□□□□□ -0.57
PHF1-211ENST00000495509 ZNF324O75467 553 aaPredicted RBP11.48□□□□□ -0.57
PHF1-211ENST00000495509 Q6AWC8 147 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms