RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 FAM231BA6NCW3 169 aa14.26□□□□□ -0.13
TSPAN4-212ENST00000494815 TAX1BP3O14907 124 aa14.26□□□□□ -0.13
TSPAN4-212ENST00000494815 HOXA3O43365 443 aaPredicted RBP14.26□□□□□ -0.13
TSPAN4-212ENST00000494815 BVES-AS1Q5T3Y7 98 aa14.26□□□□□ -0.13
TSPAN4-212ENST00000494815 KLK15Q9H2R5 256 aa14.26□□□□□ -0.13
TSPAN4-212ENST00000494815 GCN1Q92616 2671 aaKnown RBP14.25□□□□□ -0.13
TSPAN4-212ENST00000494815 TMEM89A2RUT3 159 aa14.25□□□□□ -0.13
TSPAN4-212ENST00000494815 CLPSL1A2RUU4 121 aa14.25□□□□□ -0.13
TSPAN4-212ENST00000494815 SMAD7O15105 426 aaKnown RBP14.25□□□□□ -0.13
TSPAN4-212ENST00000494815 IGHG4P01861 327 aa14.25□□□□□ -0.13
TSPAN4-212ENST00000494815 ARL3P36405 182 aa14.25□□□□□ -0.13
TSPAN4-212ENST00000494815 EXOC3-AS1Q8N2X6 119 aa14.25□□□□□ -0.13
TSPAN4-212ENST00000494815 DAZAP1Q96EP5 407 aaKnown RBP14.25□□□□□ -0.13
TSPAN4-212ENST00000494815 C17orf77Q96MU5 243 aa14.25□□□□□ -0.13
TSPAN4-212ENST00000494815 NPFFR1Q9GZQ6 430 aa14.25□□□□□ -0.13
TSPAN4-212ENST00000494815 FASNP49327 2511 aaKnown RBP14.25□□□□□ -0.13
TSPAN4-212ENST00000494815 ITPR2Q14571 2701 aa14.25□□□□□ -0.13
TSPAN4-212ENST00000494815 K7ERU9 68 aa14.24□□□□□ -0.13
TSPAN4-212ENST00000494815 BUB3O43684 328 aa14.24□□□□□ -0.13
TSPAN4-212ENST00000494815 NUDT3O95989 172 aa14.24□□□□□ -0.13
TSPAN4-212ENST00000494815 PET117Q6UWS5 81 aa14.24□□□□□ -0.13
TSPAN4-212ENST00000494815 METTL26Q96S19 204 aa14.24□□□□□ -0.13
TSPAN4-212ENST00000494815 MAP1LC3CQ9BXW4 147 aa14.24□□□□□ -0.13
TSPAN4-212ENST00000494815 SCRT2Q9NQ03 307 aa14.24□□□□□ -0.13
TSPAN4-212ENST00000494815 NPIPB6E9PJ23 425 aa14.24□□□□□ -0.13
TSPAN4-212ENST00000494815 CHEK1O14757 476 aa14.24□□□□□ -0.13
TSPAN4-212ENST00000494815 C12orf54Q6X4T0 127 aa14.24□□□□□ -0.13
TSPAN4-212ENST00000494815 DEFB125Q8N687 156 aa14.24□□□□□ -0.13
TSPAN4-212ENST00000494815 MXRA5Q9NR99 2828 aa14.23□□□□□ -0.13
TSPAN4-212ENST00000494815 IGHV3OR16-8A0A075B7F1 116 aa14.23□□□□□ -0.13
TSPAN4-212ENST00000494815 PSG9Q00887 426 aa14.23□□□□□ -0.13
TSPAN4-212ENST00000494815 TMEM95Q3KNT9 176 aa14.23□□□□□ -0.13
TSPAN4-212ENST00000494815 AAMDCQ9H7C9 122 aa14.23□□□□□ -0.13
TSPAN4-212ENST00000494815 FLNAP21333 2647 aaKnown RBP14.23□□□□□ -0.13
TSPAN4-212ENST00000494815 TLN2Q9Y4G6 2542 aa14.23□□□□□ -0.13
TSPAN4-212ENST00000494815 PSMB8P28062 276 aa14.23□□□□□ -0.13
TSPAN4-212ENST00000494815 MS4A6AQ9H2W1 248 aa14.23□□□□□ -0.13
TSPAN4-212ENST00000494815 HAX1O00165 279 aa14.22□□□□□ -0.13
TSPAN4-212ENST00000494815 NDUFA4O00483 81 aa14.22□□□□□ -0.13
TSPAN4-212ENST00000494815 RIPPLY3P57055 190 aa14.22□□□□□ -0.13
TSPAN4-212ENST00000494815 WFDC12Q8WWY7 111 aa14.22□□□□□ -0.13
TSPAN4-212ENST00000494815 ZNF469Q96JG9 3925 aaPredicted RBP14.22□□□□□ -0.13
TSPAN4-212ENST00000494815 Q86TA4 180 aa14.22□□□□□ -0.13
TSPAN4-212ENST00000494815 TMEM86BQ8N661 226 aa14.22□□□□□ -0.13
TSPAN4-212ENST00000494815 OR4X2Q8NGF9 303 aa14.22□□□□□ -0.13
TSPAN4-212ENST00000494815 HSPB8Q9UJY1 196 aa14.22□□□□□ -0.13
TSPAN4-212ENST00000494815 U3KQE9 123 aa14.22□□□□□ -0.13
TSPAN4-212ENST00000494815 A0A087X0K7 114 aa14.21□□□□□ -0.13
TSPAN4-212ENST00000494815 MUC21A0A0G2JKD1 596 aa14.21□□□□□ -0.13
TSPAN4-212ENST00000494815 TRBV6-1A0A0K0K1D8 114 aa14.21□□□□□ -0.13
TSPAN4-212ENST00000494815 MUC21A0A140T8X8 626 aa14.21□□□□□ -0.13
TSPAN4-212ENST00000494815 APOHP02749 345 aaPredicted RBP14.21□□□□□ -0.13
TSPAN4-212ENST00000494815 MUC21Q5SSG8 566 aa14.21□□□□□ -0.13
TSPAN4-212ENST00000494815 ZNF702PQ9H963 129 aa14.21□□□□□ -0.13
TSPAN4-212ENST00000494815 SMAD5-AS1Q9Y6J3 95 aa14.21□□□□□ -0.13
TSPAN4-212ENST00000494815 K7EQM0 130 aa14.2□□□□□ -0.14
TSPAN4-212ENST00000494815 TRBV12-3P01733 135 aa14.2□□□□□ -0.14
TSPAN4-212ENST00000494815 IGHV3-11P01762 117 aa14.2□□□□□ -0.14
TSPAN4-212ENST00000494815 GOLT1AQ6ZVE7 132 aa14.2□□□□□ -0.14
TSPAN4-212ENST00000494815 ERASQ7Z444 233 aa14.2□□□□□ -0.14
TSPAN4-212ENST00000494815 CD5LO43866 347 aa14.2□□□□□ -0.14
TSPAN4-212ENST00000494815 HIST1H1AQ02539 215 aaPredicted RBP14.2□□□□□ -0.14
TSPAN4-212ENST00000494815 TMEM75Q8N9X5 138 aa14.2□□□□□ -0.14
TSPAN4-212ENST00000494815 SERTM2A0A1B0GWG4 89 aa14.19□□□□□ -0.14
TSPAN4-212ENST00000494815 KRTAP1-1Q07627 177 aa14.19□□□□□ -0.14
TSPAN4-212ENST00000494815 LINC01545Q5VT33 79 aa14.19□□□□□ -0.14
TSPAN4-212ENST00000494815 A6NJY4 79 aa14.19□□□□□ -0.14
TSPAN4-212ENST00000494815 ZNF138P52744 262 aa14.19□□□□□ -0.14
TSPAN4-212ENST00000494815 LCNL1Q6ZST4 164 aa14.19□□□□□ -0.14
TSPAN4-212ENST00000494815 IGLV2-11P01706 119 aa14.18□□□□□ -0.14
TSPAN4-212ENST00000494815 CSN1S1P47710 185 aa14.18□□□□□ -0.14
TSPAN4-212ENST00000494815 CFAP161Q6P656 301 aa14.18□□□□□ -0.14
TSPAN4-212ENST00000494815 IL17RELQ6ZVW7 336 aa14.18□□□□□ -0.14
TSPAN4-212ENST00000494815 Q8N2B8 174 aa14.18□□□□□ -0.14
TSPAN4-212ENST00000494815 TRAV8-1A0A0A6YYK1 113 aa14.17□□□□□ -0.14
TSPAN4-212ENST00000494815 ZNF785A8K8V0 405 aa14.17□□□□□ -0.14
TSPAN4-212ENST00000494815 M0R3E3 92 aa14.17□□□□□ -0.14
TSPAN4-212ENST00000494815 ELANEP08246 267 aa14.17□□□□□ -0.14
TSPAN4-212ENST00000494815 FOXE3Q13461 319 aa14.17□□□□□ -0.14
TSPAN4-212ENST00000494815 PEF1Q9UBV8 284 aaKnown RBP14.17□□□□□ -0.14
TSPAN4-212ENST00000494815 ZNF207O43670 478 aaKnown RBP14.16□□□□□ -0.14
TSPAN4-212ENST00000494815 UNQ9165/PRO28630Q6UXU0 137 aa14.16□□□□□ -0.14
TSPAN4-212ENST00000494815 GATD1Q8NB37 220 aa14.16□□□□□ -0.14
TSPAN4-212ENST00000494815 MCRIP2Q9BUT9 160 aaKnown RBP14.16□□□□□ -0.14
TSPAN4-212ENST00000494815 H0Y8G0 127 aa14.16□□□□□ -0.14
TSPAN4-212ENST00000494815 PSG3Q16557 428 aa14.16□□□□□ -0.14
TSPAN4-212ENST00000494815 AMMECR1LQ6DCA0 310 aa14.16□□□□□ -0.14
TSPAN4-212ENST00000494815 PRNTQ86SH4 94 aa14.16□□□□□ -0.14
TSPAN4-212ENST00000494815 PMCHL2Q9BQD1 86 aa14.16□□□□□ -0.14
TSPAN4-212ENST00000494815 SLC50A1Q9BRV3 221 aa14.16□□□□□ -0.14
TSPAN4-212ENST00000494815 IGHV3-66A0A0C4DH42 116 aa14.15□□□□□ -0.14
TSPAN4-212ENST00000494815 A0A1B0GUT8 65 aa14.15□□□□□ -0.14
TSPAN4-212ENST00000494815 CSN3P07498 182 aa14.15□□□□□ -0.14
TSPAN4-212ENST00000494815 COX8AP10176 69 aa14.15□□□□□ -0.14
TSPAN4-212ENST00000494815 HECTD1Q9ULT8 2610 aa14.15□□□□□ -0.14
TSPAN4-212ENST00000494815 SONP18583 2426 aaKnown RBP14.15□□□□□ -0.14
TSPAN4-212ENST00000494815 FBLL1A6NHQ2 334 aaKnown RBP14.15□□□□□ -0.15
TSPAN4-212ENST00000494815 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.15□□□□□ -0.15
TSPAN4-212ENST00000494815 MYOZ3Q8TDC0 251 aa14.15□□□□□ -0.15
TSPAN4-212ENST00000494815 AP5S1Q9NUS5 200 aa14.15□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms