RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 IQCF2Q8IXL9 164 aa12.44□□□□□ -0.42
HDAC4-211ENST00000494800 GSN-AS1Q9NRJ2 163 aa12.44□□□□□ -0.42
HDAC4-211ENST00000494800 TRGV2A0A075B6R0 118 aa12.43□□□□□ -0.42
HDAC4-211ENST00000494800 AKR1C8PQ5T2L2 129 aa12.43□□□□□ -0.42
HDAC4-211ENST00000494800 PRR9Q5T870 116 aa12.43□□□□□ -0.42
HDAC4-211ENST00000494800 LINC00612Q8N6U2 182 aa12.43□□□□□ -0.42
HDAC4-211ENST00000494800 ATG101Q9BSB4 218 aa12.43□□□□□ -0.42
HDAC4-211ENST00000494800 G3V3Q6 166 aa12.42□□□□□ -0.42
HDAC4-211ENST00000494800 OR5I1Q13606 314 aa12.42□□□□□ -0.42
HDAC4-211ENST00000494800 C5orf17Q8NAS9 161 aa12.42□□□□□ -0.42
HDAC4-211ENST00000494800 C11orf72Q8NBR9 251 aa12.42□□□□□ -0.42
HDAC4-211ENST00000494800 NDFIP1Q9BT67 221 aa12.42□□□□□ -0.42
HDAC4-211ENST00000494800 TRGV1A0A0A0MS02 117 aa12.41□□□□□ -0.42
HDAC4-211ENST00000494800 CTXND1A0A1B0GTU2 59 aa12.41□□□□□ -0.42
HDAC4-211ENST00000494800 NUDT3O95989 172 aa12.41□□□□□ -0.42
HDAC4-211ENST00000494800 TCL1AP56279 114 aa12.41□□□□□ -0.42
HDAC4-211ENST00000494800 ZNF415Q09FC8 603 aa12.41□□□□□ -0.42
HDAC4-211ENST00000494800 FAM159AQ6UWV7 190 aa12.41□□□□□ -0.42
HDAC4-211ENST00000494800 SUN5Q8TC36 379 aa12.41□□□□□ -0.42
HDAC4-211ENST00000494800 FAM3BP58499 235 aaPredicted RBP12.4□□□□□ -0.42
HDAC4-211ENST00000494800 ZNF345Q14585 488 aa12.4□□□□□ -0.42
HDAC4-211ENST00000494800 Q6AWC8 147 aa12.4□□□□□ -0.42
HDAC4-211ENST00000494800 Q6ZTI0 123 aa12.4□□□□□ -0.42
HDAC4-211ENST00000494800 TREM1Q9NP99 234 aa12.4□□□□□ -0.42
HDAC4-211ENST00000494800 KMT2AQ03164 3969 aa12.39□□□□□ -0.43
HDAC4-211ENST00000494800 TRGV11A0A075B6L2 103 aa12.39□□□□□ -0.43
HDAC4-211ENST00000494800 SMLR1H3BR10 107 aa12.39□□□□□ -0.43
HDAC4-211ENST00000494800 TCRAP04437 139 aa12.39□□□□□ -0.43
HDAC4-211ENST00000494800 SUMO1P63165 101 aaKnown RBP12.39□□□□□ -0.43
HDAC4-211ENST00000494800 GNG5P63218 68 aa12.39□□□□□ -0.43
HDAC4-211ENST00000494800 LGALS9BQ3B8N2 356 aa12.39□□□□□ -0.43
HDAC4-211ENST00000494800 MUC21Q5SSG8 566 aa12.39□□□□□ -0.43
HDAC4-211ENST00000494800 C18orf15Q96N68 181 aa12.39□□□□□ -0.43
HDAC4-211ENST00000494800 TRAV8-1A0A0A6YYK1 113 aa12.38□□□□□ -0.43
HDAC4-211ENST00000494800 TRAV21A0A0B4J279 112 aa12.38□□□□□ -0.43
HDAC4-211ENST00000494800 A0A1W2PRE2 83 aa12.38□□□□□ -0.43
HDAC4-211ENST00000494800 FBLL1A6NHQ2 334 aaKnown RBP12.38□□□□□ -0.43
HDAC4-211ENST00000494800 HMSDA8MTL9 139 aa12.38□□□□□ -0.43
HDAC4-211ENST00000494800 SPINK4O60575 86 aa12.38□□□□□ -0.43
HDAC4-211ENST00000494800 CCL18P55774 89 aa12.38□□□□□ -0.43
HDAC4-211ENST00000494800 KCNRGQ8N5I3 272 aa12.38□□□□□ -0.43
HDAC4-211ENST00000494800 TMPRSS5Q9H3S3 457 aa12.38□□□□□ -0.43
HDAC4-211ENST00000494800 NAGKQ9UJ70 344 aa12.38□□□□□ -0.43
HDAC4-211ENST00000494800 TP53TG3Q9ULZ0 132 aa12.38□□□□□ -0.43
HDAC4-211ENST00000494800 KLF12Q9Y4X4 402 aa12.38□□□□□ -0.43
HDAC4-211ENST00000494800 VPS13DQ5THJ4 4388 aa12.38□□□□□ -0.43
HDAC4-211ENST00000494800 TRAV26-1A0A087WT03 109 aa12.37□□□□□ -0.43
HDAC4-211ENST00000494800 A0A0D9SG52 128 aa12.37□□□□□ -0.43
HDAC4-211ENST00000494800 ZFP69Q49AA0 526 aa12.37□□□□□ -0.43
HDAC4-211ENST00000494800 Q6ZQT7 251 aa12.37□□□□□ -0.43
HDAC4-211ENST00000494800 CYB561D1Q8N8Q1 229 aa12.37□□□□□ -0.43
HDAC4-211ENST00000494800 STOML3Q8TAV4 291 aa12.37□□□□□ -0.43
HDAC4-211ENST00000494800 NKX6-2Q9C056 277 aaPredicted RBP12.37□□□□□ -0.43
HDAC4-211ENST00000494800 CYTL1Q9NRR1 136 aa12.37□□□□□ -0.43
HDAC4-211ENST00000494800 EPDR1Q9UM22 224 aa12.37□□□□□ -0.43
HDAC4-211ENST00000494800 KANTRA0A1W2PQU2 76 aa12.36□□□□□ -0.43
HDAC4-211ENST00000494800 H3BNG1 76 aa12.36□□□□□ -0.43
HDAC4-211ENST00000494800 EIF5AP63241 154 aaKnown RBP12.36□□□□□ -0.43
HDAC4-211ENST00000494800 TMEM183BQ1AE95 376 aa12.36□□□□□ -0.43
HDAC4-211ENST00000494800 SSX7Q7RTT5 188 aa12.36□□□□□ -0.43
HDAC4-211ENST00000494800 TMEM183AQ8IXX5 376 aa12.36□□□□□ -0.43
HDAC4-211ENST00000494800 KCNS1Q96KK3 526 aa12.36□□□□□ -0.43
HDAC4-211ENST00000494800 A0A0J9YY99 117 aa12.35□□□□□ -0.43
HDAC4-211ENST00000494800 GGTLC3B5MD39 225 aa12.35□□□□□ -0.43
HDAC4-211ENST00000494800 F6UZH7 168 aa12.35□□□□□ -0.43
HDAC4-211ENST00000494800 IFNA7P01567 189 aa12.35□□□□□ -0.43
HDAC4-211ENST00000494800 HOXA5P20719 270 aa12.35□□□□□ -0.43
HDAC4-211ENST00000494800 PPT1P50897 306 aa12.35□□□□□ -0.43
HDAC4-211ENST00000494800 ZNF726P1Q15940 193 aa12.35□□□□□ -0.43
HDAC4-211ENST00000494800 TDRG1Q3Y452 100 aa12.35□□□□□ -0.43
HDAC4-211ENST00000494800 SPXQ9BT56 116 aa12.35□□□□□ -0.43
HDAC4-211ENST00000494800 MRPL16Q9NX20 251 aaKnown RBP12.35□□□□□ -0.43
HDAC4-211ENST00000494800 PSG8Q9UQ74 426 aa12.35□□□□□ -0.43
HDAC4-211ENST00000494800 EPPK1P58107 5090 aaKnown RBP12.35□□□□□ -0.43
HDAC4-211ENST00000494800 MAP1LC3B2A6NCE7 125 aa12.34□□□□□ -0.43
HDAC4-211ENST00000494800 M0R2N4 97 aa12.34□□□□□ -0.43
HDAC4-211ENST00000494800 PFDN1O60925 122 aa12.34□□□□□ -0.43
HDAC4-211ENST00000494800 FLI1Q01543 452 aaPredicted RBP12.34□□□□□ -0.43
HDAC4-211ENST00000494800 SAPCD1Q5SSQ6 148 aa12.34□□□□□ -0.43
HDAC4-211ENST00000494800 TMEM75Q8N9X5 138 aa12.34□□□□□ -0.43
HDAC4-211ENST00000494800 SGK494Q96LW2 274 aa12.34□□□□□ -0.43
HDAC4-211ENST00000494800 ZNF471Q9BX82 626 aaPredicted RBP12.34□□□□□ -0.43
HDAC4-211ENST00000494800 MAP1LC3BQ9GZQ8 125 aa12.34□□□□□ -0.43
HDAC4-211ENST00000494800 SDF2L1Q9HCN8 221 aa12.34□□□□□ -0.43
HDAC4-211ENST00000494800 IGLV2-18A0A075B6J9 118 aa12.33□□□□□ -0.44
HDAC4-211ENST00000494800 UMAD1C9J7I0 102 aa12.33□□□□□ -0.44
HDAC4-211ENST00000494800 BCL2L11O43521 198 aa12.33□□□□□ -0.44
HDAC4-211ENST00000494800 SEC11BP0C7V7 166 aa12.33□□□□□ -0.44
HDAC4-211ENST00000494800 FGF8P55075 233 aaPredicted RBP12.33□□□□□ -0.44
HDAC4-211ENST00000494800 UBE2G2P60604 165 aa12.33□□□□□ -0.44
HDAC4-211ENST00000494800 SLAQ13239 276 aa12.33□□□□□ -0.44
HDAC4-211ENST00000494800 PRNTQ86SH4 94 aa12.33□□□□□ -0.44
HDAC4-211ENST00000494800 TVP23CQ96ET8 276 aa12.33□□□□□ -0.44
HDAC4-211ENST00000494800 MDFICQ9P1T7 246 aa12.33□□□□□ -0.44
HDAC4-211ENST00000494800 SMUG1Q53HV7 270 aa12.32□□□□□ -0.44
HDAC4-211ENST00000494800 LINC00336Q6ZUF6 198 aa12.32□□□□□ -0.44
HDAC4-211ENST00000494800 OR11H4Q8NGC9 324 aa12.32□□□□□ -0.44
HDAC4-211ENST00000494800 GCGP01275 180 aa12.31□□□□□ -0.44
HDAC4-211ENST00000494800 SOHLH1Q5JUK2 328 aa12.31□□□□□ -0.44
HDAC4-211ENST00000494800 HIST1H2BAQ96A08 127 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms