RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 TMEM208Q9BTX3 173 aa6.23□□□□□ -1.41
ITGB1-217ENST00000494395 ACTR3CQ9C0K3 210 aaPredicted RBP6.23□□□□□ -1.41
ITGB1-217ENST00000494395 ZNF492Q9P255 531 aa6.23□□□□□ -1.41
ITGB1-217ENST00000494395 KLK5Q9Y337 293 aaPredicted RBP6.23□□□□□ -1.41
ITGB1-217ENST00000494395 RYR3Q15413 4870 aa6.22□□□□□ -1.41
ITGB1-217ENST00000494395 TRAV10A0A0B4J240 114 aa6.22□□□□□ -1.41
ITGB1-217ENST00000494395 TRAV12-3A0A0B4J271 114 aa6.22□□□□□ -1.41
ITGB1-217ENST00000494395 CTXND1A0A1B0GTU2 59 aa6.22□□□□□ -1.41
ITGB1-217ENST00000494395 C7orf71A4D174 169 aa6.22□□□□□ -1.41
ITGB1-217ENST00000494395 GGTLC3B5MD39 225 aa6.22□□□□□ -1.41
ITGB1-217ENST00000494395 J3KRW8 73 aa6.22□□□□□ -1.41
ITGB1-217ENST00000494395 BCL2L11O43521 198 aa6.22□□□□□ -1.41
ITGB1-217ENST00000494395 CXorf1O96002 111 aa6.22□□□□□ -1.41
ITGB1-217ENST00000494395 CSN1S1P47710 185 aa6.22□□□□□ -1.41
ITGB1-217ENST00000494395 ZNF138P52744 262 aa6.22□□□□□ -1.41
ITGB1-217ENST00000494395 EMP1P54849 157 aa6.22□□□□□ -1.41
ITGB1-217ENST00000494395 CD300CQ08708 224 aa6.22□□□□□ -1.41
ITGB1-217ENST00000494395 BTN1A1Q13410 526 aa6.22□□□□□ -1.41
ITGB1-217ENST00000494395 KRTAP19-4Q3LI73 84 aa6.22□□□□□ -1.41
ITGB1-217ENST00000494395 TMEM78Q5T7P6 136 aa6.22□□□□□ -1.41
ITGB1-217ENST00000494395 ZNF493Q6ZR52 646 aa6.22□□□□□ -1.41
ITGB1-217ENST00000494395 Q8TAT8 98 aa6.22□□□□□ -1.41
ITGB1-217ENST00000494395 TMEM263Q8WUH6 116 aaKnown RBP6.22□□□□□ -1.41
ITGB1-217ENST00000494395 LINC00476Q8WZB0 136 aa6.22□□□□□ -1.41
ITGB1-217ENST00000494395 C16orf74Q96GX8 76 aa6.22□□□□□ -1.41
ITGB1-217ENST00000494395 LINC01587Q99440 93 aa6.22□□□□□ -1.41
ITGB1-217ENST00000494395 LINC00467Q9BRT7 94 aa6.22□□□□□ -1.41
ITGB1-217ENST00000494395 NIPSNAP3BQ9BS92 247 aa6.22□□□□□ -1.41
ITGB1-217ENST00000494395 LENEPQ9Y5L5 61 aa6.22□□□□□ -1.41
ITGB1-217ENST00000494395 RYR2Q92736 4967 aa6.21□□□□□ -1.41
ITGB1-217ENST00000494395 LYRM9A8MSI8 78 aa6.21□□□□□ -1.42
ITGB1-217ENST00000494395 SEC11BP0C7V7 166 aa6.21□□□□□ -1.42
ITGB1-217ENST00000494395 GNG5P63218 68 aa6.21□□□□□ -1.42
ITGB1-217ENST00000494395 AKR1C8PQ5T2L2 129 aa6.21□□□□□ -1.42
ITGB1-217ENST00000494395 Q6ZQT7 251 aa6.21□□□□□ -1.42
ITGB1-217ENST00000494395 LINC00612Q8N6U2 182 aa6.21□□□□□ -1.42
ITGB1-217ENST00000494395 RXFP4Q8TDU9 374 aa6.21□□□□□ -1.42
ITGB1-217ENST00000494395 C2CD4CQ8TF44 421 aa6.21□□□□□ -1.42
ITGB1-217ENST00000494395 TMED6Q8WW62 240 aa6.21□□□□□ -1.42
ITGB1-217ENST00000494395 TVP23CQ96ET8 276 aa6.21□□□□□ -1.42
ITGB1-217ENST00000494395 PYGO2Q9BRQ0 406 aa6.21□□□□□ -1.42
ITGB1-217ENST00000494395 TMEM167BQ9NRX6 74 aa6.21□□□□□ -1.42
ITGB1-217ENST00000494395 APLNQ9ULZ1 77 aa6.21□□□□□ -1.42
ITGB1-217ENST00000494395 HYDINQ4G0P3 5121 aa6.21□□□□□ -1.42
ITGB1-217ENST00000494395 DEFB131BA0A096LNP1 70 aa6.2□□□□□ -1.42
ITGB1-217ENST00000494395 A0A1W2PRE2 83 aa6.2□□□□□ -1.42
ITGB1-217ENST00000494395 C1QBP02746 253 aa6.2□□□□□ -1.42
ITGB1-217ENST00000494395 FHITP49789 147 aa6.2□□□□□ -1.42
ITGB1-217ENST00000494395 TCTAP57738 103 aa6.2□□□□□ -1.42
ITGB1-217ENST00000494395 ANXA2RQ3ZCQ2 193 aa6.2□□□□□ -1.42
ITGB1-217ENST00000494395 LGALSLQ3ZCW2 172 aaPredicted RBP6.2□□□□□ -1.42
ITGB1-217ENST00000494395 FAM74A1Q5RGS3 127 aa6.2□□□□□ -1.42
ITGB1-217ENST00000494395 Q6AWC8 147 aa6.2□□□□□ -1.42
ITGB1-217ENST00000494395 GOLT1AQ6ZVE7 132 aa6.2□□□□□ -1.42
ITGB1-217ENST00000494395 TMUB2Q71RG4 321 aa6.2□□□□□ -1.42
ITGB1-217ENST00000494395 C5orf17Q8NAS9 161 aa6.2□□□□□ -1.42
ITGB1-217ENST00000494395 C11orf72Q8NBR9 251 aa6.2□□□□□ -1.42
ITGB1-217ENST00000494395 STOML3Q8TAV4 291 aa6.2□□□□□ -1.42
ITGB1-217ENST00000494395 HYLS1Q96M11 299 aa6.2□□□□□ -1.42
ITGB1-217ENST00000494395 ZNF471Q9BX82 626 aaPredicted RBP6.2□□□□□ -1.42
ITGB1-217ENST00000494395 TMPRSS5Q9H3S3 457 aa6.2□□□□□ -1.42
ITGB1-217ENST00000494395 TIMM8BQ9Y5J9 83 aaPredicted RBP6.2□□□□□ -1.42
ITGB1-217ENST00000494395 KMT2AQ03164 3969 aa6.19□□□□□ -1.42
ITGB1-217ENST00000494395 IGHV4-4A0A075B6R2 117 aa6.19□□□□□ -1.42
ITGB1-217ENST00000494395 TRAV8-1A0A0A6YYK1 113 aa6.19□□□□□ -1.42
ITGB1-217ENST00000494395 SERTM2A0A1B0GWG4 89 aa6.19□□□□□ -1.42
ITGB1-217ENST00000494395 KANTRA0A1W2PQU2 76 aa6.19□□□□□ -1.42
ITGB1-217ENST00000494395 MAP1LC3B2A6NCE7 125 aa6.19□□□□□ -1.42
ITGB1-217ENST00000494395 IGLL5B9A064 214 aa6.19□□□□□ -1.42
ITGB1-217ENST00000494395 IGLV2-11P01706 119 aa6.19□□□□□ -1.42
ITGB1-217ENST00000494395 TCRAP04437 139 aa6.19□□□□□ -1.42
ITGB1-217ENST00000494395 GPX1P07203 203 aa6.19□□□□□ -1.42
ITGB1-217ENST00000494395 HTN1P15515 57 aa6.19□□□□□ -1.42
ITGB1-217ENST00000494395 RNASE4P34096 147 aaKnown RBP6.19□□□□□ -1.42
ITGB1-217ENST00000494395 FGF8P55075 233 aaPredicted RBP6.19□□□□□ -1.42
ITGB1-217ENST00000494395 DAD1P61803 113 aa6.19□□□□□ -1.42
ITGB1-217ENST00000494395 CMTM2Q8TAZ6 248 aa6.19□□□□□ -1.42
ITGB1-217ENST00000494395 MBD3L1Q8WWY6 194 aa6.19□□□□□ -1.42
ITGB1-217ENST00000494395 MAP1LC3BQ9GZQ8 125 aa6.19□□□□□ -1.42
ITGB1-217ENST00000494395 EPDR1Q9UM22 224 aa6.19□□□□□ -1.42
ITGB1-217ENST00000494395 RPH3ALQ9UNE2 315 aa6.19□□□□□ -1.42
ITGB1-217ENST00000494395 DNAH6Q9C0G6 4158 aa6.18□□□□□ -1.42
ITGB1-217ENST00000494395 A0A1B0GVG6 124 aa6.18□□□□□ -1.42
ITGB1-217ENST00000494395 FAM74A7A6NL05 159 aa6.18□□□□□ -1.42
ITGB1-217ENST00000494395 UMAD1C9J7I0 102 aa6.18□□□□□ -1.42
ITGB1-217ENST00000494395 DAZ2Q13117 558 aaKnown RBP6.18□□□□□ -1.42
ITGB1-217ENST00000494395 IBA57Q5T440 356 aaKnown RBP6.18□□□□□ -1.42
ITGB1-217ENST00000494395 LGALS9CQ6DKI2 356 aa6.18□□□□□ -1.42
ITGB1-217ENST00000494395 EIF4E3Q8N5X7 224 aaKnown RBP6.18□□□□□ -1.42
ITGB1-217ENST00000494395 NOP10Q9NPE3 64 aaKnown RBP6.18□□□□□ -1.42
ITGB1-217ENST00000494395 TP53TG3Q9ULZ0 132 aa6.18□□□□□ -1.42
ITGB1-217ENST00000494395 VPS13DQ5THJ4 4388 aa6.18□□□□□ -1.42
ITGB1-217ENST00000494395 IGHV1OR15-1A0A075B7D0 117 aa6.17□□□□□ -1.42
ITGB1-217ENST00000494395 TPT1P13693 172 aaKnown RBP6.17□□□□□ -1.42
ITGB1-217ENST00000494395 TCL1AP56279 114 aa6.17□□□□□ -1.42
ITGB1-217ENST00000494395 EIF5AP63241 154 aaKnown RBP6.17□□□□□ -1.42
ITGB1-217ENST00000494395 DPPA3Q6W0C5 159 aa6.17□□□□□ -1.42
ITGB1-217ENST00000494395 AKAP14Q86UN6 197 aa6.17□□□□□ -1.42
ITGB1-217ENST00000494395 CCDC28AQ8IWP9 274 aa6.17□□□□□ -1.42
ITGB1-217ENST00000494395 CYB561D1Q8N8Q1 229 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms