RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 BOLA1Q9Y3E2 137 aa9.68□□□□□ -0.86
COL1A1-208ENST00000494334 PLECQ15149 4684 aaKnown RBP9.68□□□□□ -0.86
COL1A1-208ENST00000494334 K7EQM0 130 aa9.67□□□□□ -0.86
COL1A1-208ENST00000494334 PAGE4O60829 102 aa9.67□□□□□ -0.86
COL1A1-208ENST00000494334 IFNA7P01567 189 aa9.67□□□□□ -0.86
COL1A1-208ENST00000494334 IGLV2-11P01706 119 aa9.67□□□□□ -0.86
COL1A1-208ENST00000494334 CCL20P78556 96 aa9.67□□□□□ -0.86
COL1A1-208ENST00000494334 CST9LP1Q5W188 147 aa9.67□□□□□ -0.86
COL1A1-208ENST00000494334 ZNF493Q6ZR52 646 aa9.67□□□□□ -0.86
COL1A1-208ENST00000494334 Q6ZTC4 211 aa9.67□□□□□ -0.86
COL1A1-208ENST00000494334 RNASE8Q8TDE3 154 aaKnown RBP9.67□□□□□ -0.86
COL1A1-208ENST00000494334 TMEM263Q8WUH6 116 aaKnown RBP9.67□□□□□ -0.86
COL1A1-208ENST00000494334 C16orf74Q96GX8 76 aa9.67□□□□□ -0.86
COL1A1-208ENST00000494334 LINC00479Q96M42 142 aa9.67□□□□□ -0.86
COL1A1-208ENST00000494334 ARL2-SNX15V9GYD0 113 aa9.67□□□□□ -0.86
COL1A1-208ENST00000494334 TRAV1-1A0A0B4J248 108 aa9.66□□□□□ -0.86
COL1A1-208ENST00000494334 TEX48A0A1B0GUV7 120 aa9.66□□□□□ -0.86
COL1A1-208ENST00000494334 NUPR2A6NF83 97 aa9.66□□□□□ -0.86
COL1A1-208ENST00000494334 PEX7O00628 323 aa9.66□□□□□ -0.86
COL1A1-208ENST00000494334 ATP5G3P48201 142 aa9.66□□□□□ -0.86
COL1A1-208ENST00000494334 FLI1Q01543 452 aaPredicted RBP9.66□□□□□ -0.86
COL1A1-208ENST00000494334 Q6AWC8 147 aa9.66□□□□□ -0.86
COL1A1-208ENST00000494334 TMEM75Q8N9X5 138 aa9.66□□□□□ -0.86
COL1A1-208ENST00000494334 HIST1H2BAQ96A08 127 aa9.66□□□□□ -0.86
COL1A1-208ENST00000494334 LINC00467Q9BRT7 94 aa9.66□□□□□ -0.86
COL1A1-208ENST00000494334 TREM1Q9NP99 234 aa9.66□□□□□ -0.86
COL1A1-208ENST00000494334 KMT2CQ8NEZ4 4911 aaKnown RBP9.65□□□□□ -0.86
COL1A1-208ENST00000494334 IGHV1OR15-1A0A075B7D0 117 aa9.65□□□□□ -0.86
COL1A1-208ENST00000494334 TRAV34A0A0B4J273 112 aa9.65□□□□□ -0.86
COL1A1-208ENST00000494334 FBLL1A6NHQ2 334 aaKnown RBP9.65□□□□□ -0.86
COL1A1-208ENST00000494334 C11orf94C9JXX5 98 aa9.65□□□□□ -0.86
COL1A1-208ENST00000494334 F6UZH7 168 aa9.65□□□□□ -0.86
COL1A1-208ENST00000494334 ANXA2RQ3ZCQ2 193 aa9.65□□□□□ -0.86
COL1A1-208ENST00000494334 PRNTQ86SH4 94 aa9.65□□□□□ -0.86
COL1A1-208ENST00000494334 EIF4E3Q8N5X7 224 aaKnown RBP9.65□□□□□ -0.86
COL1A1-208ENST00000494334 LYRM9A8MSI8 78 aa9.64□□□□□ -0.87
COL1A1-208ENST00000494334 RGS13O14921 159 aa9.64□□□□□ -0.87
COL1A1-208ENST00000494334 PPT1P50897 306 aa9.64□□□□□ -0.87
COL1A1-208ENST00000494334 ALKAL2Q6UX46 152 aa9.64□□□□□ -0.87
COL1A1-208ENST00000494334 C8orf49Q96NF6 230 aa9.64□□□□□ -0.87
COL1A1-208ENST00000494334 TCEAL7Q9BRU2 100 aa9.64□□□□□ -0.87
COL1A1-208ENST00000494334 NDFIP1Q9BT67 221 aa9.64□□□□□ -0.87
COL1A1-208ENST00000494334 NOP10Q9NPE3 64 aaKnown RBP9.64□□□□□ -0.87
COL1A1-208ENST00000494334 TP53TG3Q9ULZ0 132 aa9.64□□□□□ -0.87
COL1A1-208ENST00000494334 TIMM8BQ9Y5J9 83 aaPredicted RBP9.64□□□□□ -0.87
COL1A1-208ENST00000494334 DYNC2H1Q8NCM8 4307 aaKnown RBP9.64□□□□□ -0.87
COL1A1-208ENST00000494334 TRAV10A0A0B4J240 114 aa9.63□□□□□ -0.87
COL1A1-208ENST00000494334 CBY3A6NI87 242 aa9.63□□□□□ -0.87
COL1A1-208ENST00000494334 TEX46H3BTG2 121 aa9.63□□□□□ -0.87
COL1A1-208ENST00000494334 MUC21Q5SSG8 566 aa9.63□□□□□ -0.87
COL1A1-208ENST00000494334 C11orf72Q8NBR9 251 aa9.63□□□□□ -0.87
COL1A1-208ENST00000494334 KLK5Q9Y337 293 aaPredicted RBP9.63□□□□□ -0.87
COL1A1-208ENST00000494334 DEFB131BA0A096LNP1 70 aa9.62□□□□□ -0.87
COL1A1-208ENST00000494334 TRAV21A0A0B4J279 112 aa9.62□□□□□ -0.87
COL1A1-208ENST00000494334 SNURFLB1AK76 121 aa9.62□□□□□ -0.87
COL1A1-208ENST00000494334 ZNF80P51504 273 aaPredicted RBP9.62□□□□□ -0.87
COL1A1-208ENST00000494334 DAD1P61803 113 aa9.62□□□□□ -0.87
COL1A1-208ENST00000494334 SAPCD1Q5SSQ6 148 aa9.62□□□□□ -0.87
COL1A1-208ENST00000494334 ZNF680Q8NEM1 530 aa9.62□□□□□ -0.87
COL1A1-208ENST00000494334 C2CD4CQ8TF44 421 aa9.62□□□□□ -0.87
COL1A1-208ENST00000494334 MANBALQ9NQG1 85 aa9.62□□□□□ -0.87
COL1A1-208ENST00000494334 GSN-AS1Q9NRJ2 163 aa9.62□□□□□ -0.87
COL1A1-208ENST00000494334 GNG13Q9P2W3 67 aa9.62□□□□□ -0.87
COL1A1-208ENST00000494334 KLF12Q9Y4X4 402 aa9.62□□□□□ -0.87
COL1A1-208ENST00000494334 GCGP01275 180 aa9.61□□□□□ -0.87
COL1A1-208ENST00000494334 DEFB130BP0DP73 79 aa9.61□□□□□ -0.87
COL1A1-208ENST00000494334 DEFB130AP0DP74 79 aa9.61□□□□□ -0.87
COL1A1-208ENST00000494334 DAZ2Q13117 558 aaKnown RBP9.61□□□□□ -0.87
COL1A1-208ENST00000494334 SMUG1Q53HV7 270 aa9.61□□□□□ -0.87
COL1A1-208ENST00000494334 IBA57Q5T440 356 aaKnown RBP9.61□□□□□ -0.87
COL1A1-208ENST00000494334 FAM159AQ6UWV7 190 aa9.61□□□□□ -0.87
COL1A1-208ENST00000494334 Q86TA4 180 aa9.61□□□□□ -0.87
COL1A1-208ENST00000494334 FMC1Q96HJ9 113 aa9.61□□□□□ -0.87
COL1A1-208ENST00000494334 SACSQ9NZJ4 4579 aa9.61□□□□□ -0.87
COL1A1-208ENST00000494334 SCO2A0A1W2PP80 73 aa9.6□□□□□ -0.87
COL1A1-208ENST00000494334 AKR1C3P42330 323 aa9.6□□□□□ -0.87
COL1A1-208ENST00000494334 TCL1AP56279 114 aa9.6□□□□□ -0.87
COL1A1-208ENST00000494334 UBE2G1P62253 170 aa9.6□□□□□ -0.87
COL1A1-208ENST00000494334 TMEM183BQ1AE95 376 aa9.6□□□□□ -0.87
COL1A1-208ENST00000494334 TDRG1Q3Y452 100 aa9.6□□□□□ -0.87
COL1A1-208ENST00000494334 LINC00612Q8N6U2 182 aa9.6□□□□□ -0.87
COL1A1-208ENST00000494334 NAGKQ9UJ70 344 aa9.6□□□□□ -0.87
COL1A1-208ENST00000494334 TRBV6-1A0A0K0K1D8 114 aa9.59□□□□□ -0.87
COL1A1-208ENST00000494334 IGLL5B9A064 214 aa9.59□□□□□ -0.87
COL1A1-208ENST00000494334 GNRH2O43555 120 aa9.59□□□□□ -0.87
COL1A1-208ENST00000494334 PFN1P07737 140 aaKnown RBP9.59□□□□□ -0.87
COL1A1-208ENST00000494334 BLOC1S1P78537 153 aa9.59□□□□□ -0.87
COL1A1-208ENST00000494334 MDFICQ9P1T7 246 aa9.59□□□□□ -0.87
COL1A1-208ENST00000494334 ZFP30Q9Y2G7 519 aa9.59□□□□□ -0.87
COL1A1-208ENST00000494334 LTAP01374 205 aa9.58□□□□□ -0.88
COL1A1-208ENST00000494334 HTN3P15516 51 aa9.58□□□□□ -0.88
COL1A1-208ENST00000494334 Q6ZTI0 123 aa9.58□□□□□ -0.88
COL1A1-208ENST00000494334 COX8CQ7Z4L0 72 aa9.58□□□□□ -0.88
COL1A1-208ENST00000494334 TMEM183AQ8IXX5 376 aa9.58□□□□□ -0.88
COL1A1-208ENST00000494334 TXNDC17Q9BRA2 123 aa9.58□□□□□ -0.88
COL1A1-208ENST00000494334 C11orf21Q9P2W6 132 aa9.58□□□□□ -0.88
COL1A1-208ENST00000494334 TRGV11A0A075B6L2 103 aa9.57□□□□□ -0.88
COL1A1-208ENST00000494334 GAGE12BA1L429 117 aa9.57□□□□□ -0.88
COL1A1-208ENST00000494334 SPINK4O60575 86 aa9.57□□□□□ -0.88
COL1A1-208ENST00000494334 GAGE7O76087 117 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms