RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 TSPOP30536 169 aa8.4□□□□□ -1.06
MCF2L-231ENST00000494043 OR5I1Q13606 314 aa8.4□□□□□ -1.06
MCF2L-231ENST00000494043 PRR9Q5T870 116 aa8.4□□□□□ -1.06
MCF2L-231ENST00000494043 PRR27Q6MZM9 219 aa8.4□□□□□ -1.06
MCF2L-231ENST00000494043 SVBPQ8N300 66 aa8.4□□□□□ -1.06
MCF2L-231ENST00000494043 ISOC2Q96AB3 205 aa8.4□□□□□ -1.06
MCF2L-231ENST00000494043 BIN3Q9NQY0 253 aa8.4□□□□□ -1.06
MCF2L-231ENST00000494043 KLLNB2CW77 178 aa8.39□□□□□ -1.07
MCF2L-231ENST00000494043 M0R036 132 aa8.39□□□□□ -1.07
MCF2L-231ENST00000494043 M0R2Z0 102 aa8.39□□□□□ -1.07
MCF2L-231ENST00000494043 CDKN1BP46527 198 aa8.39□□□□□ -1.07
MCF2L-231ENST00000494043 ZNF80P51504 273 aaPredicted RBP8.39□□□□□ -1.07
MCF2L-231ENST00000494043 SPINK13Q1W4C9 94 aa8.39□□□□□ -1.07
MCF2L-231ENST00000494043 DMRTA1Q5VZB9 504 aa8.39□□□□□ -1.07
MCF2L-231ENST00000494043 CLRN3Q8NCR9 226 aa8.39□□□□□ -1.07
MCF2L-231ENST00000494043 SRD5A3Q9H8P0 318 aa8.39□□□□□ -1.07
MCF2L-231ENST00000494043 NBEAL1Q6ZS30 2694 aa8.39□□□□□ -1.07
MCF2L-231ENST00000494043 AGRNO00468 2067 aa8.38□□□□□ -1.07
MCF2L-231ENST00000494043 B4DEV8 164 aa8.38□□□□□ -1.07
MCF2L-231ENST00000494043 J3KRW8 73 aa8.38□□□□□ -1.07
MCF2L-231ENST00000494043 SNAPINO95295 136 aa8.38□□□□□ -1.07
MCF2L-231ENST00000494043 AMBPP02760 352 aa8.38□□□□□ -1.07
MCF2L-231ENST00000494043 GPX1P07203 203 aa8.38□□□□□ -1.07
MCF2L-231ENST00000494043 CRIP1P50238 77 aa8.38□□□□□ -1.07
MCF2L-231ENST00000494043 BTN1A1Q13410 526 aa8.38□□□□□ -1.07
MCF2L-231ENST00000494043 KIR3DS1Q14943 382 aa8.38□□□□□ -1.07
MCF2L-231ENST00000494043 FAM162BQ5T6X4 162 aa8.38□□□□□ -1.07
MCF2L-231ENST00000494043 KPRPQ5T749 579 aaPredicted RBP8.38□□□□□ -1.07
MCF2L-231ENST00000494043 LINC00322Q6ZN03 302 aaPredicted RBP8.38□□□□□ -1.07
MCF2L-231ENST00000494043 SFRP2Q96HF1 295 aa8.38□□□□□ -1.07
MCF2L-231ENST00000494043 NOTCH1P46531 2555 aa8.37□□□□□ -1.07
MCF2L-231ENST00000494043 C7orf71A4D174 169 aa8.37□□□□□ -1.07
MCF2L-231ENST00000494043 C19orf71A6NCJ1 209 aa8.37□□□□□ -1.07
MCF2L-231ENST00000494043 SH2D1AO60880 128 aa8.37□□□□□ -1.07
MCF2L-231ENST00000494043 PFN1P07737 140 aaKnown RBP8.37□□□□□ -1.07
MCF2L-231ENST00000494043 RPL35AP18077 110 aaKnown RBP8.37□□□□□ -1.07
MCF2L-231ENST00000494043 RNASE4P34096 147 aaKnown RBP8.37□□□□□ -1.07
MCF2L-231ENST00000494043 FXYD7P58549 80 aa8.37□□□□□ -1.07
MCF2L-231ENST00000494043 ERVFC1-1P60608 527 aa8.37□□□□□ -1.07
MCF2L-231ENST00000494043 NUTF2P61970 127 aaKnown RBP8.37□□□□□ -1.07
MCF2L-231ENST00000494043 RHEBQ15382 184 aa8.37□□□□□ -1.07
MCF2L-231ENST00000494043 GFI1BQ5VTD9 330 aa8.37□□□□□ -1.07
MCF2L-231ENST00000494043 Q6AWC8 147 aa8.37□□□□□ -1.07
MCF2L-231ENST00000494043 FAM231DQ6ZW35 169 aa8.37□□□□□ -1.07
MCF2L-231ENST00000494043 RNASE7Q9H1E1 156 aaKnown RBP8.37□□□□□ -1.07
MCF2L-231ENST00000494043 OSTCQ9NRP0 149 aa8.37□□□□□ -1.07
MCF2L-231ENST00000494043 TRAV12-2A0A075B6T6 113 aa8.36□□□□□ -1.07
MCF2L-231ENST00000494043 TRAV21A0A0B4J279 112 aa8.36□□□□□ -1.07
MCF2L-231ENST00000494043 C7orf77A4D0Y5 90 aa8.36□□□□□ -1.07
MCF2L-231ENST00000494043 FABP5P3A8MUU1 101 aa8.36□□□□□ -1.07
MCF2L-231ENST00000494043 CRXO43186 299 aaPredicted RBP8.36□□□□□ -1.07
MCF2L-231ENST00000494043 MT-ND4LP03901 98 aa8.36□□□□□ -1.07
MCF2L-231ENST00000494043 RNF212Q495C1 297 aa8.36□□□□□ -1.07
MCF2L-231ENST00000494043 IBA57Q5T440 356 aaKnown RBP8.36□□□□□ -1.07
MCF2L-231ENST00000494043 MORN3Q6PF18 240 aaPredicted RBP8.36□□□□□ -1.07
MCF2L-231ENST00000494043 C15orf54Q8N8G6 183 aa8.36□□□□□ -1.07
MCF2L-231ENST00000494043 OR10G8Q8NGN5 311 aa8.36□□□□□ -1.07
MCF2L-231ENST00000494043 DAZAP1Q96EP5 407 aaKnown RBP8.36□□□□□ -1.07
MCF2L-231ENST00000494043 FBN3Q75N90 2809 aa8.36□□□□□ -1.07
MCF2L-231ENST00000494043 A0A087WWC5 75 aa8.35□□□□□ -1.07
MCF2L-231ENST00000494043 TRAV12-3A0A0B4J271 114 aa8.35□□□□□ -1.07
MCF2L-231ENST00000494043 PPP1R2P9O14990 202 aa8.35□□□□□ -1.07
MCF2L-231ENST00000494043 INSP01308 110 aa8.35□□□□□ -1.07
MCF2L-231ENST00000494043 P01737 135 aa8.35□□□□□ -1.07
MCF2L-231ENST00000494043 GIG44P09565 113 aaPredicted RBP8.35□□□□□ -1.07
MCF2L-231ENST00000494043 IGHV4-30-4P0DP06 118 aa8.35□□□□□ -1.07
MCF2L-231ENST00000494043 ATRAIDQ6UW56 229 aa8.35□□□□□ -1.07
MCF2L-231ENST00000494043 Q6ZQT7 251 aa8.35□□□□□ -1.07
MCF2L-231ENST00000494043 NUDT10Q8NFP7 164 aa8.35□□□□□ -1.07
MCF2L-231ENST00000494043 NUDT11Q96G61 164 aa8.35□□□□□ -1.07
MCF2L-231ENST00000494043 TUBA4BQ9H853 241 aa8.35□□□□□ -1.07
MCF2L-231ENST00000494043 LOC102724200A0A096LPH7 203 aaPredicted RBP8.34□□□□□ -1.07
MCF2L-231ENST00000494043 ZNF705GA8MUZ8 300 aaPredicted RBP8.34□□□□□ -1.07
MCF2L-231ENST00000494043 A8MZ25 164 aa8.34□□□□□ -1.07
MCF2L-231ENST00000494043 GATCO43716 136 aaKnown RBP8.34□□□□□ -1.07
MCF2L-231ENST00000494043 ZNF324O75467 553 aaPredicted RBP8.34□□□□□ -1.07
MCF2L-231ENST00000494043 ANAPC16Q96DE5 110 aa8.34□□□□□ -1.07
MCF2L-231ENST00000494043 C1QTNF4Q9BXJ3 329 aa8.34□□□□□ -1.07
MCF2L-231ENST00000494043 CTDSP1Q9GZU7 261 aa8.34□□□□□ -1.07
MCF2L-231ENST00000494043 RPP21Q9H633 154 aaKnown RBP8.34□□□□□ -1.07
MCF2L-231ENST00000494043 RPS10P5Q9NQ39 176 aa8.34□□□□□ -1.07
MCF2L-231ENST00000494043 C11orf21Q9P2W6 132 aa8.34□□□□□ -1.07
MCF2L-231ENST00000494043 XCL2Q9UBD3 114 aa8.34□□□□□ -1.07
MCF2L-231ENST00000494043 V9GYV3 84 aa8.34□□□□□ -1.07
MCF2L-231ENST00000494043 KIR2DL5BA0A0G2JN68 375 aa8.33□□□□□ -1.08
MCF2L-231ENST00000494043 KIR2DL5BA0A0G2JPC4 375 aa8.33□□□□□ -1.08
MCF2L-231ENST00000494043 H7BYZ3 331 aa8.33□□□□□ -1.08
MCF2L-231ENST00000494043 CA1P00915 261 aaPredicted RBP8.33□□□□□ -1.08
MCF2L-231ENST00000494043 RBMY1A1P0DJD3 496 aaKnown RBP8.33□□□□□ -1.08
MCF2L-231ENST00000494043 RBMY1CP0DJD4 496 aa8.33□□□□□ -1.08
MCF2L-231ENST00000494043 RBMY1FQ15415 496 aaKnown RBP8.33□□□□□ -1.08
MCF2L-231ENST00000494043 LINC01559Q495D7 138 aa8.33□□□□□ -1.08
MCF2L-231ENST00000494043 CT83Q5H943 113 aa8.33□□□□□ -1.08
MCF2L-231ENST00000494043 KIR2DL5AQ8N109 375 aa8.33□□□□□ -1.08
MCF2L-231ENST00000494043 OR2D3Q8NGH3 330 aa8.33□□□□□ -1.08
MCF2L-231ENST00000494043 KIR2DL5BQ8NHK3 375 aa8.33□□□□□ -1.08
MCF2L-231ENST00000494043 C20orf144Q9BQM9 153 aa8.33□□□□□ -1.08
MCF2L-231ENST00000494043 CSTL1Q9H114 145 aa8.33□□□□□ -1.08
MCF2L-231ENST00000494043 NAGKQ9UJ70 344 aa8.33□□□□□ -1.08
MCF2L-231ENST00000494043 TMEM189A5PLL7 270 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms