RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 NDUFA5Q16718 116 aa2.3□□□□□ -2.04
GTF3A-208ENST00000493903 TMEM128Q5BJH2 165 aa2.3□□□□□ -2.04
GTF3A-208ENST00000493903 BCL2L15Q5TBC7 163 aa2.3□□□□□ -2.04
GTF3A-208ENST00000493903 OR52R1Q8NGF1 315 aa2.3□□□□□ -2.04
GTF3A-208ENST00000493903 OR13D1Q8NGV5 346 aa2.3□□□□□ -2.04
GTF3A-208ENST00000493903 ADAT3Q96EY9 351 aaPredicted RBP2.3□□□□□ -2.04
GTF3A-208ENST00000493903 YPEL2Q96QA6 119 aa2.3□□□□□ -2.04
GTF3A-208ENST00000493903 GINS4Q9BRT9 223 aa2.3□□□□□ -2.04
GTF3A-208ENST00000493903 LRTM1Q9HBL6 345 aa2.3□□□□□ -2.04
GTF3A-208ENST00000493903 HS3ST2Q9Y278 367 aa2.3□□□□□ -2.04
GTF3A-208ENST00000493903 MED13Q9UHV7 2174 aa2.3□□□□□ -2.04
GTF3A-208ENST00000493903 ABCA2Q9BZC7 2435 aa2.3□□□□□ -2.04
GTF3A-208ENST00000493903 KIAA2026Q5HYC2 2103 aa2.29□□□□□ -2.04
GTF3A-208ENST00000493903 DOCK4Q8N1I0 1966 aa2.29□□□□□ -2.04
GTF3A-208ENST00000493903 IGKV1D-17A0A075B6S4 117 aa2.29□□□□□ -2.04
GTF3A-208ENST00000493903 IGKV1-9A0A0C4DH69 117 aa2.29□□□□□ -2.04
GTF3A-208ENST00000493903 FUOMA2VDF0 154 aa2.29□□□□□ -2.04
GTF3A-208ENST00000493903 IFNA14P01570 189 aa2.29□□□□□ -2.04
GTF3A-208ENST00000493903 P0C880 135 aa2.29□□□□□ -2.04
GTF3A-208ENST00000493903 COX6A1P12074 109 aa2.29□□□□□ -2.04
GTF3A-208ENST00000493903 LTC4SQ16873 150 aa2.29□□□□□ -2.04
GTF3A-208ENST00000493903 DEFB109BQ30KR1 87 aa2.29□□□□□ -2.04
GTF3A-208ENST00000493903 FAM27BQ5VT28 67 aa2.29□□□□□ -2.04
GTF3A-208ENST00000493903 SAMD13Q5VXD3 122 aa2.29□□□□□ -2.04
GTF3A-208ENST00000493903 C22orf39Q6P5X5 142 aa2.29□□□□□ -2.04
GTF3A-208ENST00000493903 TMEM35BQ8NCS4 154 aa2.29□□□□□ -2.04
GTF3A-208ENST00000493903 HIST1H2BLQ99880 126 aa2.29□□□□□ -2.04
GTF3A-208ENST00000493903 DOHHQ9BU89 302 aa2.29□□□□□ -2.04
GTF3A-208ENST00000493903 MED11Q9P086 117 aa2.29□□□□□ -2.04
GTF3A-208ENST00000493903 PRO2289Q9P1D8 64 aa2.29□□□□□ -2.04
GTF3A-208ENST00000493903 PCTPQ9UKL6 214 aa2.29□□□□□ -2.04
GTF3A-208ENST00000493903 CCDC168Q8NDH2 2452 aa2.29□□□□□ -2.04
GTF3A-208ENST00000493903 SPG11Q96JI7 2443 aa2.29□□□□□ -2.04
GTF3A-208ENST00000493903 ZNF469Q96JG9 3925 aaPredicted RBP2.29□□□□□ -2.04
GTF3A-208ENST00000493903 PCNX1Q96RV3 2341 aa2.29□□□□□ -2.04
GTF3A-208ENST00000493903 CPAMD8Q8IZJ3 1885 aa2.28□□□□□ -2.04
GTF3A-208ENST00000493903 PVALEFA0A1B0GWK0 134 aa2.28□□□□□ -2.04
GTF3A-208ENST00000493903 OR51F1A6NGY5 319 aa2.28□□□□□ -2.04
GTF3A-208ENST00000493903 C3orf84H3BNL1 204 aa2.28□□□□□ -2.04
GTF3A-208ENST00000493903 M0R378 163 aa2.28□□□□□ -2.04
GTF3A-208ENST00000493903 CST8O60676 142 aa2.28□□□□□ -2.04
GTF3A-208ENST00000493903 HTR1AP08908 422 aa2.28□□□□□ -2.04
GTF3A-208ENST00000493903 METTL15P1P0C7V9 234 aa2.28□□□□□ -2.04
GTF3A-208ENST00000493903 RNASE4P34096 147 aaKnown RBP2.28□□□□□ -2.04
GTF3A-208ENST00000493903 KRTAP13-3Q3SY46 172 aa2.28□□□□□ -2.04
GTF3A-208ENST00000493903 HCP5Q6MZN7 132 aa2.28□□□□□ -2.04
GTF3A-208ENST00000493903 DPPA3Q6W0C5 159 aa2.28□□□□□ -2.04
GTF3A-208ENST00000493903 GKN2Q86XP6 184 aa2.28□□□□□ -2.04
GTF3A-208ENST00000493903 ANGPTL5Q86XS5 388 aa2.28□□□□□ -2.04
GTF3A-208ENST00000493903 CCL4L1Q8NHW4 92 aa2.28□□□□□ -2.04
GTF3A-208ENST00000493903 GRPEL2Q8TAA5 225 aa2.28□□□□□ -2.04
GTF3A-208ENST00000493903 RMND5BQ96G75 393 aaPredicted RBP2.28□□□□□ -2.04
GTF3A-208ENST00000493903 TEX37Q96LM6 180 aa2.28□□□□□ -2.04
GTF3A-208ENST00000493903 AIF1LQ9BQI0 150 aa2.28□□□□□ -2.04
GTF3A-208ENST00000493903 EFCAB11Q9BUY7 163 aa2.28□□□□□ -2.04
GTF3A-208ENST00000493903 TACC2O95359 2948 aa2.28□□□□□ -2.05
GTF3A-208ENST00000493903 DCHS2Q6V1P9 2916 aa2.28□□□□□ -2.05
GTF3A-208ENST00000493903 PRRC2CQ9Y520 2896 aaKnown RBP2.28□□□□□ -2.05
GTF3A-208ENST00000493903 ANKHD1Q8IWZ3 2542 aaKnown RBP2.27□□□□□ -2.05
GTF3A-208ENST00000493903 TRGV10A0A0A0MS01 117 aa2.27□□□□□ -2.05
GTF3A-208ENST00000493903 C7orf71A4D174 169 aa2.27□□□□□ -2.05
GTF3A-208ENST00000493903 TLCD2A6NGC4 264 aa2.27□□□□□ -2.05
GTF3A-208ENST00000493903 FAM107AO95990 144 aa2.27□□□□□ -2.05
GTF3A-208ENST00000493903 TRGC2P03986 189 aa2.27□□□□□ -2.05
GTF3A-208ENST00000493903 PAEPP09466 180 aa2.27□□□□□ -2.05
GTF3A-208ENST00000493903 NFYBP25208 207 aa2.27□□□□□ -2.05
GTF3A-208ENST00000493903 HINT1P49773 126 aaPredicted RBP2.27□□□□□ -2.05
GTF3A-208ENST00000493903 UBE2BP63146 152 aa2.27□□□□□ -2.05
GTF3A-208ENST00000493903 ERHP84090 104 aaKnown RBP2.27□□□□□ -2.05
GTF3A-208ENST00000493903 SURF2Q15527 256 aaPredicted RBP2.27□□□□□ -2.05
GTF3A-208ENST00000493903 SS18Q15532 418 aa2.27□□□□□ -2.05
GTF3A-208ENST00000493903 TAF9Q16594 264 aa2.27□□□□□ -2.05
GTF3A-208ENST00000493903 ZNF791Q3KP31 576 aaPredicted RBP2.27□□□□□ -2.05
GTF3A-208ENST00000493903 KHDC3LQ587J8 217 aa2.27□□□□□ -2.05
GTF3A-208ENST00000493903 LINC00301Q8NCQ3 95 aa2.27□□□□□ -2.05
GTF3A-208ENST00000493903 OR5A1Q8NGJ0 315 aa2.27□□□□□ -2.05
GTF3A-208ENST00000493903 OR9Q1Q8NGQ5 310 aa2.27□□□□□ -2.05
GTF3A-208ENST00000493903 STAG3L4Q8TBR4 150 aa2.27□□□□□ -2.05
GTF3A-208ENST00000493903 MBD3L1Q8WWY6 194 aa2.27□□□□□ -2.05
GTF3A-208ENST00000493903 PATE1Q8WXA2 126 aa2.27□□□□□ -2.05
GTF3A-208ENST00000493903 GPX7Q96SL4 187 aaPredicted RBP2.27□□□□□ -2.05
GTF3A-208ENST00000493903 NHP2Q9NX24 153 aaKnown RBP2.27□□□□□ -2.05
GTF3A-208ENST00000493903 NUBP2Q9Y5Y2 271 aa2.27□□□□□ -2.05
GTF3A-208ENST00000493903 ANKRD36A6QL64 1941 aa2.27□□□□□ -2.05
GTF3A-208ENST00000493903 ANK2Q01484 3957 aa2.26□□□□□ -2.05
GTF3A-208ENST00000493903 POLEQ07864 2286 aa2.26□□□□□ -2.05
GTF3A-208ENST00000493903 UNC13CQ8NB66 2214 aa2.26□□□□□ -2.05
GTF3A-208ENST00000493903 ESPL1Q14674 2120 aa2.26□□□□□ -2.05
GTF3A-208ENST00000493903 TMSB15BA0A087X1C1 80 aa2.26□□□□□ -2.05
GTF3A-208ENST00000493903 CXorf51AA0A1B0GTR3 108 aa2.26□□□□□ -2.05
GTF3A-208ENST00000493903 RFPL4AA6NLU0 287 aa2.26□□□□□ -2.05
GTF3A-208ENST00000493903 RFPL4AL1F8VTS6 287 aa2.26□□□□□ -2.05
GTF3A-208ENST00000493903 TNFP01375 233 aa2.26□□□□□ -2.05
GTF3A-208ENST00000493903 DEFA4P12838 97 aa2.26□□□□□ -2.05
GTF3A-208ENST00000493903 TMEM258P61165 79 aa2.26□□□□□ -2.05
GTF3A-208ENST00000493903 S100A12P80511 92 aa2.26□□□□□ -2.05
GTF3A-208ENST00000493903 PLCXD2Q0VAA5 305 aa2.26□□□□□ -2.05
GTF3A-208ENST00000493903 Q6ZTI0 123 aa2.26□□□□□ -2.05
GTF3A-208ENST00000493903 CROCCP2Q86T23 111 aa2.26□□□□□ -2.05
GTF3A-208ENST00000493903 DEFB106AQ8N104 65 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms