RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 LY6G6CO95867 125 aa8.34□□□□□ -1.07
CTSA-209ENST00000493522 HTN1P15515 57 aa8.34□□□□□ -1.07
CTSA-209ENST00000493522 RNASE4P34096 147 aaKnown RBP8.34□□□□□ -1.07
CTSA-209ENST00000493522 ATP5G3P48201 142 aa8.34□□□□□ -1.07
CTSA-209ENST00000493522 PPT1P50897 306 aa8.34□□□□□ -1.07
CTSA-209ENST00000493522 PMS2P11Q13670 270 aa8.34□□□□□ -1.07
CTSA-209ENST00000493522 PRR9Q5T870 116 aa8.34□□□□□ -1.07
CTSA-209ENST00000493522 ZFAND2AQ8N6M9 145 aa8.34□□□□□ -1.07
CTSA-209ENST00000493522 NDFIP1Q9BT67 221 aa8.34□□□□□ -1.07
CTSA-209ENST00000493522 NKX6-2Q9C056 277 aaPredicted RBP8.34□□□□□ -1.07
CTSA-209ENST00000493522 ARL2-SNX15V9GYD0 113 aa8.34□□□□□ -1.07
CTSA-209ENST00000493522 HECTD4Q9Y4D8 3996 aa8.34□□□□□ -1.07
CTSA-209ENST00000493522 TRBV7-9A0A0J9YWB2 115 aa8.33□□□□□ -1.08
CTSA-209ENST00000493522 TMEM189A5PLL7 270 aa8.33□□□□□ -1.08
CTSA-209ENST00000493522 F6UZH7 168 aa8.33□□□□□ -1.08
CTSA-209ENST00000493522 NMBP08949 121 aa8.33□□□□□ -1.08
CTSA-209ENST00000493522 TAS2R60P59551 318 aa8.33□□□□□ -1.08
CTSA-209ENST00000493522 TMEM75Q8N9X5 138 aa8.33□□□□□ -1.08
CTSA-209ENST00000493522 C11orf45Q8TAV5 145 aa8.33□□□□□ -1.08
CTSA-209ENST00000493522 MANBALQ9NQG1 85 aa8.33□□□□□ -1.08
CTSA-209ENST00000493522 GNG13Q9P2W3 67 aa8.33□□□□□ -1.08
CTSA-209ENST00000493522 LENEPQ9Y5L5 61 aa8.33□□□□□ -1.08
CTSA-209ENST00000493522 PCLOQ9Y6V0 5065 aa8.33□□□□□ -1.08
CTSA-209ENST00000493522 TRAV1-1A0A0B4J248 108 aa8.32□□□□□ -1.08
CTSA-209ENST00000493522 CXorf65A6NEN9 183 aa8.32□□□□□ -1.08
CTSA-209ENST00000493522 PRM2P04554 102 aa8.32□□□□□ -1.08
CTSA-209ENST00000493522 AKR1C3P42330 323 aa8.32□□□□□ -1.08
CTSA-209ENST00000493522 NANOS2P60321 138 aaKnown RBP8.32□□□□□ -1.08
CTSA-209ENST00000493522 FLI1Q01543 452 aaPredicted RBP8.32□□□□□ -1.08
CTSA-209ENST00000493522 PRNTQ86SH4 94 aa8.32□□□□□ -1.08
CTSA-209ENST00000493522 HIST1H2BAQ96A08 127 aa8.32□□□□□ -1.08
CTSA-209ENST00000493522 KRTAP17-1Q9BYP8 105 aa8.32□□□□□ -1.08
CTSA-209ENST00000493522 TREM1Q9NP99 234 aa8.32□□□□□ -1.08
CTSA-209ENST00000493522 CELA1Q9UNI1 258 aa8.32□□□□□ -1.08
CTSA-209ENST00000493522 PSG8Q9UQ74 426 aa8.32□□□□□ -1.08
CTSA-209ENST00000493522 TRAV34A0A0B4J273 112 aa8.31□□□□□ -1.08
CTSA-209ENST00000493522 NUPR2A6NF83 97 aa8.31□□□□□ -1.08
CTSA-209ENST00000493522 FBLL1A6NHQ2 334 aaKnown RBP8.31□□□□□ -1.08
CTSA-209ENST00000493522 C11orf94C9JXX5 98 aa8.31□□□□□ -1.08
CTSA-209ENST00000493522 RGS13O14921 159 aa8.31□□□□□ -1.08
CTSA-209ENST00000493522 IFNA1P01562 189 aa8.31□□□□□ -1.08
CTSA-209ENST00000493522 UBE2G1P62253 170 aa8.31□□□□□ -1.08
CTSA-209ENST00000493522 CCL20P78556 96 aa8.31□□□□□ -1.08
CTSA-209ENST00000493522 Q86TA4 180 aa8.31□□□□□ -1.08
CTSA-209ENST00000493522 CCDC28AQ8IWP9 274 aa8.31□□□□□ -1.08
CTSA-209ENST00000493522 C16orf74Q96GX8 76 aa8.31□□□□□ -1.08
CTSA-209ENST00000493522 PYGO2Q9BRQ0 406 aa8.31□□□□□ -1.08
CTSA-209ENST00000493522 TCEAL7Q9BRU2 100 aa8.31□□□□□ -1.08
CTSA-209ENST00000493522 SCO2A0A1W2PP80 73 aa8.3□□□□□ -1.08
CTSA-209ENST00000493522 IGLV2-11P01706 119 aa8.3□□□□□ -1.08
CTSA-209ENST00000493522 AZU1P20160 251 aa8.3□□□□□ -1.08
CTSA-209ENST00000493522 BLOC1S1P78537 153 aa8.3□□□□□ -1.08
CTSA-209ENST00000493522 FAM222AQ5U5X8 452 aa8.3□□□□□ -1.08
CTSA-209ENST00000493522 ZNF767PQ75MW2 155 aa8.3□□□□□ -1.08
CTSA-209ENST00000493522 TMEM263Q8WUH6 116 aaKnown RBP8.3□□□□□ -1.08
CTSA-209ENST00000493522 TVP23CQ96ET8 276 aa8.3□□□□□ -1.08
CTSA-209ENST00000493522 LINC00479Q96M42 142 aa8.3□□□□□ -1.08
CTSA-209ENST00000493522 C8orf49Q96NF6 230 aa8.3□□□□□ -1.08
CTSA-209ENST00000493522 NAGKQ9UJ70 344 aa8.3□□□□□ -1.08
CTSA-209ENST00000493522 VPS13DQ5THJ4 4388 aa8.29□□□□□ -1.08
CTSA-209ENST00000493522 TEX48A0A1B0GUV7 120 aa8.29□□□□□ -1.08
CTSA-209ENST00000493522 CBY3A6NI87 242 aa8.29□□□□□ -1.08
CTSA-209ENST00000493522 ZNF324O75467 553 aaPredicted RBP8.29□□□□□ -1.08
CTSA-209ENST00000493522 SPART-AS1P0CW21 52 aa8.29□□□□□ -1.08
CTSA-209ENST00000493522 MUC21Q5SSG8 566 aa8.29□□□□□ -1.08
CTSA-209ENST00000493522 Q6AWC8 147 aa8.29□□□□□ -1.08
CTSA-209ENST00000493522 Q6ZQT7 251 aa8.29□□□□□ -1.08
CTSA-209ENST00000493522 ZNF493Q6ZR52 646 aa8.29□□□□□ -1.08
CTSA-209ENST00000493522 EIF4E3Q8N5X7 224 aaKnown RBP8.29□□□□□ -1.08
CTSA-209ENST00000493522 RNASE8Q8TDE3 154 aaKnown RBP8.29□□□□□ -1.08
CTSA-209ENST00000493522 FMC1Q96HJ9 113 aa8.29□□□□□ -1.08
CTSA-209ENST00000493522 IGHV1OR15-1A0A075B7D0 117 aa8.28□□□□□ -1.08
CTSA-209ENST00000493522 TRAV21A0A0B4J279 112 aa8.28□□□□□ -1.08
CTSA-209ENST00000493522 SNURFLB1AK76 121 aa8.28□□□□□ -1.08
CTSA-209ENST00000493522 GCGP01275 180 aa8.28□□□□□ -1.08
CTSA-209ENST00000493522 BCL2P10415 239 aa8.28□□□□□ -1.08
CTSA-209ENST00000493522 SMUG1Q53HV7 270 aa8.28□□□□□ -1.08
CTSA-209ENST00000493522 SAPCD1Q5SSQ6 148 aa8.28□□□□□ -1.08
CTSA-209ENST00000493522 ZNF680Q8NEM1 530 aa8.28□□□□□ -1.08
CTSA-209ENST00000493522 DKK2Q9UBU2 259 aa8.28□□□□□ -1.08
CTSA-209ENST00000493522 KLK5Q9Y337 293 aaPredicted RBP8.28□□□□□ -1.08
CTSA-209ENST00000493522 PLAC8L1A1L4L8 177 aa8.27□□□□□ -1.09
CTSA-209ENST00000493522 DAD1P61803 113 aa8.27□□□□□ -1.09
CTSA-209ENST00000493522 MEF2BQ02080 365 aaPredicted RBP8.27□□□□□ -1.09
CTSA-209ENST00000493522 C12orf74Q32Q52 190 aa8.27□□□□□ -1.09
CTSA-209ENST00000493522 CEMP1Q6PRD7 247 aaPredicted RBP8.27□□□□□ -1.09
CTSA-209ENST00000493522 FAM159AQ6UWV7 190 aa8.27□□□□□ -1.09
CTSA-209ENST00000493522 Q6ZTC4 211 aa8.27□□□□□ -1.09
CTSA-209ENST00000493522 PHLDA1Q8WV24 401 aaPredicted RBP8.27□□□□□ -1.09
CTSA-209ENST00000493522 TXNDC17Q9BRA2 123 aa8.27□□□□□ -1.09
CTSA-209ENST00000493522 LINC00467Q9BRT7 94 aa8.27□□□□□ -1.09
CTSA-209ENST00000493522 RYR1P21817 5038 aa8.26□□□□□ -1.09
CTSA-209ENST00000493522 LYRM9A8MSI8 78 aa8.26□□□□□ -1.09
CTSA-209ENST00000493522 TAGLN2P37802 199 aaKnown RBP8.26□□□□□ -1.09
CTSA-209ENST00000493522 ZNF80P51504 273 aaPredicted RBP8.26□□□□□ -1.09
CTSA-209ENST00000493522 ZNF415Q09FC8 603 aa8.26□□□□□ -1.09
CTSA-209ENST00000493522 TMEM183BQ1AE95 376 aa8.26□□□□□ -1.09
CTSA-209ENST00000493522 ANXA2RQ3ZCQ2 193 aa8.26□□□□□ -1.09
CTSA-209ENST00000493522 C2CD4CQ8TF44 421 aa8.26□□□□□ -1.09
CTSA-209ENST00000493522 NOP10Q9NPE3 64 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 159 ms